| GenBank top hits | e value | %identity | Alignment |
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| KAG6594716.1 DNA-directed RNA polymerases IV and V subunit 4, partial [Cucurbita argyrosperma subsp. sororia] | 3.2e-90 | 89.9 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVS-VKASVAKEPQPLELKIEQEL
MSEKG+KGFPVQKKP KSSLKSS KDASLKGKDDSLSK KKGRKVQFDAQGSVDAQ NLS+K+SGKNGDLGKGGKG++ KASV+KE QPLELKIEQEL
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVS-VKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
PKNVKCQCLMDCEAAQLLQGI DQMVLLSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+GV DSEICVIANVCPDTTDEVFAL+P+LK
Subjt: PKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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| XP_004134991.2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis sativus] | 3.5e-92 | 90.4 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
MSEKG+KGF VQK+PAKSSLKSS LKDASLKGKDDSLSK KKGRKVQFDAQGSVDA N SMKYSGKNGDLGKGGKG + KAS+AKEPQ LELKIEQELP
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLKK
KNVKCQCLMDCEAAQLLQGI DQMV LSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+GVTDSEICVIANVCPDTTDEVFALLP+LK+
Subjt: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLKK
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| XP_008440955.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis melo] | 3.5e-92 | 90.86 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
MSEKG+KGF VQKKPAKSSLKSS LKDASLKGKDDSLSK KKGRKVQFDAQGSVDA N+ SMKYSGKNGD+GKGGKG + KASVAKEPQ LELKIEQELP
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
KNVKCQCLMDCEAAQLLQGI DQMV LSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+G+TDSEICVIANVCPDTTDEVFALLP+LK
Subjt: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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| XP_038881037.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Benincasa hispida] | 9.8e-95 | 92.89 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
MS+KG+KGFPVQKKPAKSSLKSS LKDASLKGKDDSLSK KKGRKVQFDAQGSVDAQ+ SMKYSGKNGDLGKGGKGV+ KAS AKEPQPLELKIEQELP
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
KNVKCQCLMDCEAAQLLQGI DQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHG+T+SEICVIANVCPDTTDEVFALLP+LK
Subjt: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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| XP_038881040.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X2 [Benincasa hispida] | 3.8e-91 | 90.86 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
MS+KG+KGFPVQKKPAKSSLKSS LKD GKDDSLSK KKGRKVQFDAQGSVDAQ+ SMKYSGKNGDLGKGGKGV+ KAS AKEPQPLELKIEQELP
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
KNVKCQCLMDCEAAQLLQGI DQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHG+T+SEICVIANVCPDTTDEVFALLP+LK
Subjt: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 1.7e-92 | 90.4 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
MSEKG+KGF VQK+PAKSSLKSS LKDASLKGKDDSLSK KKGRKVQFDAQGSVDA N SMKYSGKNGDLGKGGKG + KAS+AKEPQ LELKIEQELP
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLKK
KNVKCQCLMDCEAAQLLQGI DQMV LSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+GVTDSEICVIANVCPDTTDEVFALLP+LK+
Subjt: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLKK
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 1.7e-92 | 90.86 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
MSEKG+KGF VQKKPAKSSLKSS LKDASLKGKDDSLSK KKGRKVQFDAQGSVDA N+ SMKYSGKNGD+GKGGKG + KASVAKEPQ LELKIEQELP
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
KNVKCQCLMDCEAAQLLQGI DQMV LSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+G+TDSEICVIANVCPDTTDEVFALLP+LK
Subjt: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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| A0A1S3B2C7 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 | 6.6e-89 | 88.83 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
MSEKG+KGF VQKKPAKSSLKSS LKD GKDDSLSK KKGRKVQFDAQGSVDA N+ SMKYSGKNGD+GKGGKG + KASVAKEPQ LELKIEQELP
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
KNVKCQCLMDCEAAQLLQGI DQMV LSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+G+TDSEICVIANVCPDTTDEVFALLP+LK
Subjt: KNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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| A0A6J1EJD9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 5.1e-89 | 88.38 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVS-VKASVAKEPQPLELKIEQEL
MSEKG+KGFPVQKKP KSSLKSS KDASLKGKDDSLSK KKGRKVQFDAQGSVDAQ NLS+K+SGKNGDLGKGGKG++ KASV+KE QPLELKIEQEL
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVS-VKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
PKNVKCQCLMDCEAAQLLQGI DQM LLSADPTIKIPTSFDRGLQYAKRANHYVN+E VRPVLETLKK+GV DSEICVIANVCPDTTDEVF+L+P+LK
Subjt: PKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 1.9e-88 | 88.38 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVS-VKASVAKEPQPLELKIEQEL
MSEKG+KGFPVQKKP KSSLKS KDASLKGKDDSLSK KKGRKVQFDAQGSVDA NLSMK+ GKNGDLGKGGKG++ KASV+KE QPLELKIEQEL
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNNLSMKYSGKNGDLGKGGKGVS-VKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
PKNVKCQCLMDCEAAQLLQGI DQMVLLSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+GV DSEICVIANVCPDT DEVFAL+P+LK
Subjt: PKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O48890 DNA-directed RNA polymerase II subunit 4 | 5.9e-18 | 39.29 | Show/hide |
Query: KEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDT
+E ELKI E +K +CLM+CE + +L+ +Q+ +S DP ++ F++ LQY KR + Y N ++VR V E L +H +T+ E+CV+ N+CP+T
Subjt: KEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDT
Query: TDEVFALLPTLK
+E A++P+LK
Subjt: TDEVFALLPTLK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 6.7e-06 | 37.7 | Show/hide |
Query: SFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLKK
+F + L YA++ + Y N S++ V L K + + EI +AN+CP+ +DE +L+P+LKK
Subjt: SFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLKK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 1.1e-29 | 45.23 | Show/hide |
Query: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQN--NLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQE
MSEKG KG KSSLKS KD GKD S +K KKGRK+ FD + N+S K GK S ELK +
Subjt: MSEKGDKGFPVQKKPAKSSLKSSTLKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQN--NLSMKYSGKNGDLGKGGKGVSVKASVAKEPQPLELKIEQE
Query: LPKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
LP+N +C+MDCEA Q+L GI Q+V LS DP+IKIP S+DR L Y + HY N +SVR VLE LK +G++D E+CVIAN ++ DEV A +P+LK
Subjt: LPKNVKCQCLMDCEAAQLLQGIHDQMVLLSADPTIKIPTSFDRGLQYAKRANHYVNSESVRPVLETLKKHGVTDSEICVIANVCPDTTDEVFALLPTLK
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