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Clc01G21760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G21760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:33193715..33194008
RNA-Seq ExpressionClc01G21760
SyntenyClc01G21760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594704.1 hypothetical protein SDJN03_11257, partial [Cucurbita argyrosperma subsp. sororia]7.5e-3579.17Show/hide
Query:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        M L+WLLHSTS LLGNP EV       SS+ K+G EEIC SGFQMPLHYPRYNKADYQKME+WK+DLLLKEYGLSF GSLEEKRAFAMGAF WPDQ
Subjt:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

KAG6603827.1 hypothetical protein SDJN03_04436, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3984.85Show/hide
Query:  MALRWLLHSTSYLLGNPT-EVHGYGEERSSKVKKGYEEICT-SGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY
        MAL WLL+S + LLGNP  EVHGYGEERSSK +KG EEICT SGFQMPLHYP Y KADYQKMEEWK+D LLKEYGLSFQGSLEEKRAFAMGAFLWPDQY
Subjt:  MALRWLLHSTSYLLGNPT-EVHGYGEERSSKVKKGYEEICT-SGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY

TYK12988.1 uncharacterized protein E5676_scaffold255G005850 [Cucumis melo var. makuwa]2.6e-4387.63Show/hide
Query:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY
        M LRWLLHSTSYLLGNP E H YGEERSS  KKGYEEIC SGFQMPLHYPRY K+DYQ ME WKLDLLLKEYGLSFQGSLEEKRAFAMGAF+WPDQY
Subjt:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY

XP_011658113.1 uncharacterized protein LOC105435946 [Cucumis sativus]3.7e-4287.5Show/hide
Query:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        M LR LLHS SYLLGNP E H YGEERSSK KKGYEE+C SGFQMPLHYPRY K+DYQKMEEWKLDLLLKEYGLSF+GSLEEKRAFAMGAFLWPDQ
Subjt:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

XP_038882557.1 uncharacterized protein LOC120073788 [Benincasa hispida]7.4e-4390.72Show/hide
Query:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY
        MALRWLLHSTSYLLGNP E    GEE SSK K GYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFA+GAFLWPDQY
Subjt:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY

TrEMBL top hitse value%identityAlignment
A0A0A0KMW8 Uncharacterized protein1.8e-4287.5Show/hide
Query:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        M LR LLHS SYLLGNP E H YGEERSSK KKGYEE+C SGFQMPLHYPRY K+DYQKMEEWKLDLLLKEYGLSF+GSLEEKRAFAMGAFLWPDQ
Subjt:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

A0A2N9EZP3 Uncharacterized protein1.1e-2863Show/hide
Query:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKG---YEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY
        MAL WL+HS  ++LG P + +     +S KV  G    +E+  SGFQMPLHYPRYNKADY+KMEEWK+DLLLK+YGL+F+G+L+EKRA+AMGAFLWP QY
Subjt:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKG---YEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY

A0A5D3CP92 Uncharacterized protein1.2e-4387.63Show/hide
Query:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY
        M LRWLLHSTSYLLGNP E H YGEERSS  KKGYEEIC SGFQMPLHYPRY K+DYQ ME WKLDLLLKEYGLSFQGSLEEKRAFAMGAF+WPDQY
Subjt:  MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY

A0A6J1B6U9 uncharacterized protein LOC1104246512.5e-2857.02Show/hide
Query:  MALRWLLHSTSYLLGNP------------------TEVHGYGEERSSKVKKGYE------EICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSF
        MALRW +HS  ++LG P                   E H  G  RSSKV  G +      E+  SGFQMPLHYPRY KADYQKMEEWK+D+LL+EYGLSF
Subjt:  MALRWLLHSTSYLLGNP------------------TEVHGYGEERSSKVKKGYE------EICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSF

Query:  QGSLEEKRAFAMGAFLWPDQY
        +G+L+EKRA+AMGAFLWPDQY
Subjt:  QGSLEEKRAFAMGAFLWPDQY

A0A6J1BUU9 uncharacterized protein LOC1110055698.3e-3269.16Show/hide
Query:  MALRWLLHSTSYLLGNPTEVHGYG--------EERSSKVKKGYEEIC--TSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGA
        MAL+WLLHS  YLL    EVH           EER  K KKG EEIC   SGFQMPLHYPRYNKADYQKMEEW++DLLL +YG+ F+GSLEEKRAFAMGA
Subjt:  MALRWLLHSTSYLLGNPTEVHGYG--------EERSSKVKKGYEEIC--TSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGA

Query:  FLWPDQY
        FLWPDQ+
Subjt:  FLWPDQY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein4.4e-1760Show/hide
Query:  KKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGL--SFQGSLEEKRAFAMGAFLWP
        K G  +  +SGF+MPLHYPRY K DY++MEEW+LDLLL EYGL      +L EKRAFA+  F+WP
Subjt:  KKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGL--SFQGSLEEKRAFAMGAFLWP

AT3G11405.1 unknown protein2.6e-0957.41Show/hide
Query:  SGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQ-GSLEEKRAFAMGAFLW
        S FQMPL YP Y K  Y  M E +LD LLK YGL    G+L  K+ FA+GAFLW
Subjt:  SGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQ-GSLEEKRAFAMGAFLW

AT3G55570.1 unknown protein1.1e-1567.92Show/hide
Query:  SGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLW
        S F+MPLHYPRY+K DYQ M EWKLD +L +YGLS  G L  KR FA+GAFLW
Subjt:  SGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLW

AT5G41761.1 unknown protein7.5e-1752.11Show/hide
Query:  ERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        E ++K+     +  +S FQ+PLHYP+Y K+DY+KM EW+LD LL+EYGL   G   EKR FA+GAFLW  +
Subjt:  ERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

AT5G55620.1 unknown protein5.5e-2058.57Show/hide
Query:  RSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        R+  +K   +E   SGFQ+PLHYP+Y+K+DY+ M++ +LDLLLK+YG SF+GSLE+KR FA+ +FLWPDQ
Subjt:  RSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAAGATGGCTGCTTCATTCAACAAGTTATCTTCTTGGGAACCCAACTGAGGTCCATGGCTATGGTGAAGAGAGAAGTTCAAAAGTTAAAAAGGGTTATGAAGA
AATATGCACTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAACAAGGCAGATTACCAGAAGATGGAGGAGTGGAAGCTTGATCTCCTTCTCAAGGAATATGGCT
TGAGTTTTCAAGGCAGTTTGGAGGAGAAGAGGGCTTTTGCAATGGGTGCTTTTCTATGGCCTGATCAGTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTAAGATGGCTGCTTCATTCAACAAGTTATCTTCTTGGGAACCCAACTGAGGTCCATGGCTATGGTGAAGAGAGAAGTTCAAAAGTTAAAAAGGGTTATGAAGA
AATATGCACTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAACAAGGCAGATTACCAGAAGATGGAGGAGTGGAAGCTTGATCTCCTTCTCAAGGAATATGGCT
TGAGTTTTCAAGGCAGTTTGGAGGAGAAGAGGGCTTTTGCAATGGGTGCTTTTCTATGGCCTGATCAGTATTGA
Protein sequenceShow/hide protein sequence
MALRWLLHSTSYLLGNPTEVHGYGEERSSKVKKGYEEICTSGFQMPLHYPRYNKADYQKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQY