; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G21770 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G21770
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTPD1 protein homolog 1-like
Genome locationClcChr01:33198598..33199245
RNA-Seq ExpressionClc01G21770
SyntenyClc01G21770
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
GO:0009408 - response to heat (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12989.1 TPD1 protein-like protein 1-like isoform X2 [Cucumis melo var. makuwa]1.4e-7385.45Show/hide
Query:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC
        GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSECSK+DIIIFQG  TPLP GIPTYIVQILNSCASDC
Subjt:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC

Query:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS
        SISNIHVKCGWFSSARLVNPRIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Subjt:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS

XP_004134986.1 TPD1 protein homolog 1 isoform X2 [Cucumis sativus]3.1e-7384.94Show/hide
Query:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC
        GGAFHRFCL F LT FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGS C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDC
Subjt:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC

Query:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS
        SISNIHVKCGWFSSARLVNPRIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Subjt:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS

XP_008440085.1 PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo]1.4e-7385.45Show/hide
Query:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC
        GGAFHRFCLCF L  FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDC
Subjt:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC

Query:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS
        SISNIHVKCGWFSSARLVNPRIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Subjt:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS

XP_008440086.1 PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo]3.1e-7385.45Show/hide
Query:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC
        GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDC
Subjt:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC

Query:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS
        SISNIHVKCGWFSSARLVNPRIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Subjt:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS

XP_038880861.1 TPD1 protein homolog 1-like isoform X2 [Benincasa hispida]6.5e-7989.29Show/hide
Query:  MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCAS
        MKGGAFHRF LCF L CFL       EFKLVHLRVV+AAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDD+IIFQGQ TPLPDGIPTYIVQILNSCAS
Subjt:  MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCAS

Query:  DCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS
        DCSISNIH+KCGWFSSARLVNPRIFRRVSYDDCLV++GQALGPGQTLSFQYANTFPYPLSVS V CSS
Subjt:  DCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS

TrEMBL top hitse value%identityAlignment
A0A0A0KL27 Uncharacterized protein1.5e-7384.94Show/hide
Query:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC
        GGAFHRFCL F LT FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGS C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDC
Subjt:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC

Query:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS
        SISNIHVKCGWFSSARLVNPRIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Subjt:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS

A0A1S3AZV4 TPD1 protein homolog 1-like isoform X16.8e-7485.45Show/hide
Query:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC
        GGAFHRFCLCF L  FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDC
Subjt:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC

Query:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS
        SISNIHVKCGWFSSARLVNPRIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Subjt:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS

A0A1S3B0B6 TPD1 protein homolog 1-like isoform X21.5e-7385.45Show/hide
Query:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC
        GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDC
Subjt:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC

Query:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS
        SISNIHVKCGWFSSARLVNPRIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Subjt:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS

A0A5D3CRM1 TPD1 protein-like protein 1-like isoform X26.8e-7485.45Show/hide
Query:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC
        GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMNRIGSECSK+DIIIFQG  TPLP GIPTYIVQILNSCASDC
Subjt:  GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDC

Query:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS
        SISNIHVKCGWFSSARLVNPRIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Subjt:  SISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS

A0A6J1ITT0 TPD1 protein homolog 1-like3.8e-6475Show/hide
Query:  MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCAS
        MK GAF RF LCF L         F  FKLV L VV+AAAREK +GIS MSLQSS +G+ MNR+GSECSKDD+++FQGQ  PLPDGIP++IVQILNSC+S
Subjt:  MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCAS

Query:  DCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS
         CSISNIH+KCGWFSSARLVNPRIFRRV YDDCL+NDG+ALGPGQTLSFQYANTF YPLSVS V CSS
Subjt:  DCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058351.4e-0744.16Show/hide
Query:  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSFQYANTFPY---PLSVSF
        V+++N C   C I N+ +KC  F  + LV+P   R +S    +C+VNDG  L P QTLSF Y+NT  +   PLS SF
Subjt:  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSFQYANTFPY---PLSVSF

Q1G3T1 TPD1 protein homolog 11.7e-4565.6Show/hide
Query:  EKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQAL
        E R  +S   L S + G   NRIG +CSKDDI++FQG   PLP G+P+Y V+I NSC SDC+I+ IHV CGWFSS RLVNPR+FRR+ YDDCLVNDGQ L
Subjt:  EKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQAL

Query:  GPGQTLSFQYANTFPYPLSVSFVIC
        GPGQ+LSFQYAN+F YPLSV+ V C
Subjt:  GPGQTLSFQYANTFPYPLSVSFVIC

Q2QR54 TPD1 protein homolog 1A1.4e-3148.82Show/hide
Query:  ISGMSLQSSNSGKEMNRIGSECS-KDDIIIFQGQKTPLPDGIPTYIVQILNSCA------SDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQ
        +SG        G    R+   C+  DDI I+QG+ TPLP G+P Y V ++N CA       +C+I+ IHV+CGWFSS  LV+PR+FRR+ +DDCL+NDG+
Subjt:  ISGMSLQSSNSGKEMNRIGSECS-KDDIIIFQGQKTPLPDGIPTYIVQILNSCA------SDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQ

Query:  ALGPGQTLSFQYANTFPYPLSVSFVIC
         L  G+T+SF+Y N+FPY LSVS   C
Subjt:  ALGPGQTLSFQYANTFPYPLSVSFVIC

Q6TLJ2 Protein TAPETUM DETERMINANT 12.1e-3556.1Show/hide
Query:  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPG
        M L S  +GK     E  RIG +C   DI++ Q    P+P+GIP Y+V+I N C S C IS IH+ CGWFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G
Subjt:  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPG

Query:  QTLSFQYANTFPYPLSVSFVICS
         TLSF YANTFPY LSV+FV C+
Subjt:  QTLSFQYANTFPYPLSVSFVICS

Q8S6P9 TPD1 protein homolog 1B1.6e-2444.35Show/hide
Query:  SSNSGKE-MNRIGSE-CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQY
        S N G+  M R+  + CS+ +++++Q     LP GIPTY V+I+N C + C++ ++H+ CG F+SA LV+P  F+R+ ++DCLV  G  LGP + +SFQY
Subjt:  SSNSGKE-MNRIGSE-CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQY

Query:  ANTFPYPLSVSFVIC
        +N+F YPL+V+ V C
Subjt:  ANTFPYPLSVSFVIC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein9.9e-0944.16Show/hide
Query:  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSFQYANTFPY---PLSVSF
        V+++N C   C I N+ +KC  F  + LV+P   R +S    +C+VNDG  L P QTLSF Y+NT  +   PLS SF
Subjt:  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSFQYANTFPY---PLSVSF

AT1G32583.1 FUNCTIONS IN: molecular_function unknown1.2e-4665.6Show/hide
Query:  EKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQAL
        E R  +S   L S + G   NRIG +CSKDDI++FQG   PLP G+P+Y V+I NSC SDC+I+ IHV CGWFSS RLVNPR+FRR+ YDDCLVNDGQ L
Subjt:  EKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQAL

Query:  GPGQTLSFQYANTFPYPLSVSFVIC
        GPGQ+LSFQYAN+F YPLSV+ V C
Subjt:  GPGQTLSFQYANTFPYPLSVSFVIC

AT4G24972.1 tapetum determinant 11.5e-3656.1Show/hide
Query:  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPG
        M L S  +GK     E  RIG +C   DI++ Q    P+P+GIP Y+V+I N C S C IS IH+ CGWFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G
Subjt:  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPG

Query:  QTLSFQYANTFPYPLSVSFVICS
         TLSF YANTFPY LSV+FV C+
Subjt:  QTLSFQYANTFPYPLSVSFVICS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCG
GGCAGCTGCAAGAGAAAAAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCA
TTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAA
TGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCT
GTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCG
GGCAGCTGCAAGAGAAAAAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCA
TTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAA
TGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCT
GTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA
Protein sequenceShow/hide protein sequence
MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVK
CGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS