CuGenDBv2

Gene ID	Clc01G21780
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Genome location	ClcChr01:33200135..33200665
RNA-Seq Expression	Clc01G21780
Synteny	Clc01G21780
Gene Ontology terms	GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008470 - Uncharacterised protein family Ycf33

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134802.1 uncharacterized protein LOC101208124 [Cucumis sativus]

1.2e-78

91.48

Show/hide

Query:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF TP+FPTFKTPLIS PSF IK ISP+RTPFRP ASSA PQSPAKPLKIP P+D K IEATPSG SRFLIIGAVSVGVALFLIGCDGERALALGPE
Subjt:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        GPLVEEFWDNVRRYA+YALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDY+Y
Subjt:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

XP_008440084.1 PREDICTED: uncharacterized protein LOC103484667 [Cucumis melo]

1.9e-76

89.77

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Query:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF TP+FPTF+T LI  PSF +K I P+RTPFRP ASSA PQSPAKPLKIP PSD K IEATPSG SRFLIIGAVSVGVALFLIGCD ERALALGPE
Subjt:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
Subjt:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

XP_022949889.1 uncharacterized protein LOC111453148 [Cucurbita moschata]

4.2e-68

79.56

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Query:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL
        MATSFR+     P  PTFK P +SPP F IKA SPLR  FRP A+SA PQSPAKPLK P P D K I+ TP GNSRFLIIGAVSVGVALFL+GCDG+RAL
Subjt:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL

Query:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        ALGPEGPLVEEFWDNVRRYAIYA+TVS+GA+YTILLPI ELLKNPITAVLVL IFGGAIF+ISQVLSAMVGV EFSYDY+Y
Subjt:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

XP_022979034.1 uncharacterized protein LOC111478796 [Cucurbita maxima]

3.2e-68

80.11

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Query:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL
        MATSFR+     P  PTFK+P +SPP F IKA SPLR PFRP A+SA PQS AKPLK P P D K I+ TP GNSRFLIIGAVSVGVALFL+GC+GERAL
Subjt:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL

Query:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        ALGPEGPLVEEFWDNVRRYAIYA+TVSTGA+YTILLPILELLKNPITAVLVL I GGAIF+ISQVLSAMVGV EFSYDY+Y
Subjt:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

XP_023543366.1 uncharacterized protein LOC111803269 [Cucurbita pepo subsp. pepo]

2.2e-69

80.66

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Query:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL
        MATSFR+     P  PTFK P +SPP F IKA SPLR PFRP A+SA PQSPAKPLK P P D K I+ TP GNSRFLIIGAVSVGVALFL+GCDG+RAL
Subjt:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL

Query:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        ALGPEGPLVEEFWDNVRRYAIYA+TVSTGA+YTILLPI ELLKNPITAVLVL IFGGAIF+ISQVLSAMVGV EFSYDY+Y
Subjt:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHP7 Uncharacterized protein ycf33

5.7e-79

91.48

Show/hide

Query:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF TP+FPTFKTPLIS PSF IK ISP+RTPFRP ASSA PQSPAKPLKIP P+D K IEATPSG SRFLIIGAVSVGVALFLIGCDGERALALGPE
Subjt:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        GPLVEEFWDNVRRYA+YALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDY+Y
Subjt:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

A0A1S3B114 Uncharacterized protein ycf33

9.0e-77

89.77

Show/hide

Query:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF TP+FPTF+T LI  PSF +K I P+RTPFRP ASSA PQSPAKPLKIP PSD K IEATPSG SRFLIIGAVSVGVALFLIGCD ERALALGPE
Subjt:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
Subjt:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

A0A5D3CNG7 Uncharacterized protein ycf33

9.0e-77

89.77

Show/hide

Query:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF TP+FPTF+T LI  PSF +K I P+RTPFRP ASSA PQSPAKPLKIP PSD K IEATPSG SRFLIIGAVSVGVALFLIGCD ERALALGPE
Subjt:  MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
Subjt:  GPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

A0A6J1GE79 Uncharacterized protein ycf33

2.0e-68

79.56

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Query:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL
        MATSFR+     P  PTFK P +SPP F IKA SPLR  FRP A+SA PQSPAKPLK P P D K I+ TP GNSRFLIIGAVSVGVALFL+GCDG+RAL
Subjt:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL

Query:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        ALGPEGPLVEEFWDNVRRYAIYA+TVS+GA+YTILLPI ELLKNPITAVLVL IFGGAIF+ISQVLSAMVGV EFSYDY+Y
Subjt:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

A0A6J1IVK7 Uncharacterized protein ycf33

1.5e-68

80.11

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Query:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL
        MATSFR+     P  PTFK+P +SPP F IKA SPLR PFRP A+SA PQS AKPLK P P D K I+ TP GNSRFLIIGAVSVGVALFL+GC+GERAL
Subjt:  MATSFRT-----PYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERAL

Query:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY
        ALGPEGPLVEEFWDNVRRYAIYA+TVSTGA+YTILLPILELLKNPITAVLVL I GGAIF+ISQVLSAMVGV EFSYDY+Y
Subjt:  ALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16410.1 unknown protein

2.5e-34

63.55

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Query:  RFLIIGAVSVGVALFLI-GCDGERALALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTE
        R+ ++G VSVG+ + L+ G D E+A+ALGPEGPL+EEFWDNVRRY +YALTVSTGA+  +  PI ELLKNPI+A+L+L+I GG+ +I+SQV+SAM+GV E
Subjt:  RFLIIGAVSVGVALFLI-GCDGERALALGPEGPLVEEFWDNVRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTE

Query:  FSYDYSY
        F+Y YSY
Subjt:  FSYDYSY

Sequences

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CDS sequence

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ATGGCCACCTCCTTCAGAACTCCATACTTCCCCACTTTCAAAACCCCACTTATTTCTCCTCCTTCATTTCAAATCAAGGCCATCTCCCCTCTCCGAACCCCTTTCCGGCC
ATTCGCTTCCTCTGCGCTGCCGCAATCTCCCGCCAAACCCCTAAAAATCCCTGACCCGTCGGATTCCAAGAAAATTGAAGCAACCCCAAGTGGGAACTCGAGGTTTTTGA
TCATCGGAGCTGTCTCGGTGGGCGTCGCCCTGTTTCTGATAGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGCCCTGAAGGTCCGTTGGTGGAGGAATTTTGGGACAAT
GTTAGAAGATATGCAATTTACGCCCTTACTGTGAGTACTGGTGCTATTTACACTATTCTTCTCCCGATTTTGGAACTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTT
GGTTATTTTTGGAGGTGCCATTTTCATTATCTCTCAAGTTCTCTCTGCTATGGTTGGTGTTACTGAGTTTTCTTATGATTATTCCTATTGA

mRNA sequence

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Protein sequence

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MATSFRTPYFPTFKTPLISPPSFQIKAISPLRTPFRPFASSALPQSPAKPLKIPDPSDSKKIEATPSGNSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDN
VRRYAIYALTVSTGAIYTILLPILELLKNPITAVLVLVIFGGAIFIISQVLSAMVGVTEFSYDYSY

Clc01G21780 (gene) of Watermelon (cordophanus) v2 genome