; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G21790 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G21790
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:33203255..33204001
RNA-Seq ExpressionClc01G21790
SyntenyClc01G21790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3451851.1 hypothetical protein FNV43_RR07947 [Rhamnella rubrinervis]4.7e-0836.81Show/hide
Query:  EASVAVHSSSIALLQERFRQLQKMKEMREEREFV-KLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTLLPQTSLS
        E    VH SSIALLQERFRQLQ+MKEMREE+E + ++L++++S   H    +   +    + FEP+   P  +  +  + + +  V     + +   S+ 
Subjt:  EASVAVHSSSIALLQERFRQLQKMKEMREEREFV-KLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTLLPQTSLS

Query:  LSLTSSNDQPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL
         S  SS  +P      LM+LWP+   T +S   S D+++SF +KL++    DS+  VDTSLHL
Subjt:  LSLTSSNDQPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL

KAG6594702.1 hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2551.14Show/hide
Query:  MGLRKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTL
        MG  +++   S+ V  SSIALLQERFRQLQK+KEMREERE V+LLSLS +PK H          NTCVLFEPS++      MMM        +    +  
Subjt:  MGLRKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTL

Query:  LPQTSLSLSLTSSNDQP------NNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL
        LPQTSLSL  TS +         + ++P LM+LWP+  + TTST++SCDSAIS I+KL     SDSDI VDTSLHL
Subjt:  LPQTSLSLSLTSSNDQP------NNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL

KGN49044.1 hypothetical protein Csa_002770 [Cucumis sativus]9.6e-5469.31Show/hide
Query:  RKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNN-----TNTCVLFEPSIS--HPHHELMMMKKKKK---KKEV
        + N E ASV +HSSSIALLQERFRQLQK+KEMREE+E VKLLSLSQ PKTH+CCSFFFNN     TNTCV+FEPSIS  +PHHELMM  KKKK       
Subjt:  RKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNN-----TNTCVLFEPSIS--HPHHELMMMKKKKK---KKEV

Query:  EPAILTLLPQTSLSLSLTSSND-----QPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHE-------YSDSDIGVDTSLHL
           +LTLLPQTSLSLSLTSS+      Q +NNIPTLMDLWP+P  ++TSTT+SCDSAISFITKLNDH+       Y DSDI VDTSLHL
Subjt:  EPAILTLLPQTSLSLSLTSSND-----QPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHE-------YSDSDIGVDTSLHL

TYK12991.1 hypothetical protein E5676_scaffold255G005880 [Cucumis melo var. makuwa]1.1e-5469.84Show/hide
Query:  LRKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFN----NTNTCVLFEPSISH--PHHELMMMKKKKK---KKEV
        +RK+++EASV VHSSSIALLQERFRQLQK+KEMREERE VKLLSLSQ PKTHSCCSFFFN    NTNTCV+FEPSIS+  PHHELMM  KKKK       
Subjt:  LRKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFN----NTNTCVLFEPSISH--PHHELMMMKKKKK---KKEV

Query:  EPAILTLLPQTSLSLSLTSSND-----QPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHE-------YSDSDIGVDTSLHL
           +LTLLPQTSLSLSLT+S+      Q +NNIPTLMDLWP+P +T+T T++SCDSAISFI+KLNDH+       Y DSDI VDTSLHL
Subjt:  EPAILTLLPQTSLSLSLTSSND-----QPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHE-------YSDSDIGVDTSLHL

XP_015878993.1 uncharacterized protein LOC107415217 [Ziziphus jujuba]1.7e-1040.12Show/hide
Query:  VAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTLLPQTSLSLSLT
        +A+H SSIALLQERFRQLQ+MKEMRE +E +++L +  + +  S       N N  + FEP  S P+ + +            P I  +  Q SLSL   
Subjt:  VAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTLLPQTSLSLSLT

Query:  SSNDQPNNNI-------------PTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL
          N + N NI             PTLM+LWP+  T ++S  +S  S+ S I K  D   SDSD  VDTSLHL
Subjt:  SSNDQPNNNI-------------PTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL

TrEMBL top hitse value%identityAlignment
A0A0A0KJS5 Uncharacterized protein4.7e-5469.31Show/hide
Query:  RKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNN-----TNTCVLFEPSIS--HPHHELMMMKKKKK---KKEV
        + N E ASV +HSSSIALLQERFRQLQK+KEMREE+E VKLLSLSQ PKTH+CCSFFFNN     TNTCV+FEPSIS  +PHHELMM  KKKK       
Subjt:  RKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNN-----TNTCVLFEPSIS--HPHHELMMMKKKKK---KKEV

Query:  EPAILTLLPQTSLSLSLTSSND-----QPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHE-------YSDSDIGVDTSLHL
           +LTLLPQTSLSLSLTSS+      Q +NNIPTLMDLWP+P  ++TSTT+SCDSAISFITKLNDH+       Y DSDI VDTSLHL
Subjt:  EPAILTLLPQTSLSLSLTSSND-----QPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHE-------YSDSDIGVDTSLHL

A0A5D3CME5 Uncharacterized protein5.5e-5569.84Show/hide
Query:  LRKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFN----NTNTCVLFEPSISH--PHHELMMMKKKKK---KKEV
        +RK+++EASV VHSSSIALLQERFRQLQK+KEMREERE VKLLSLSQ PKTHSCCSFFFN    NTNTCV+FEPSIS+  PHHELMM  KKKK       
Subjt:  LRKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFN----NTNTCVLFEPSISH--PHHELMMMKKKKK---KKEV

Query:  EPAILTLLPQTSLSLSLTSSND-----QPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHE-------YSDSDIGVDTSLHL
           +LTLLPQTSLSLSLT+S+      Q +NNIPTLMDLWP+P +T+T T++SCDSAISFI+KLNDH+       Y DSDI VDTSLHL
Subjt:  EPAILTLLPQTSLSLSLTSSND-----QPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHE-------YSDSDIGVDTSLHL

A0A6P3ZU56 uncharacterized protein LOC1074152178.3e-1140.12Show/hide
Query:  VAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTLLPQTSLSLSLT
        +A+H SSIALLQERFRQLQ+MKEMRE +E +++L +  + +  S       N N  + FEP  S P+ + +            P I  +  Q SLSL   
Subjt:  VAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTLLPQTSLSLSLT

Query:  SSNDQPNNNI-------------PTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL
          N + N NI             PTLM+LWP+  T ++S  +S  S+ S I K  D   SDSD  VDTSLHL
Subjt:  SSNDQPNNNI-------------PTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL

W9QDY3 Uncharacterized protein1.5e-0736.93Show/hide
Query:  RKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCV---LFEPSISHPHHELMMMKKKKKKKEVEPAILTL
        R+  ++    VH SSIALLQERFRQLQ++KE+REERE +++LS       ++  +   N T  C    L   S  H HH  ++  + +         L+L
Subjt:  RKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCV---LFEPSISHPHHELMMMKKKKKKKEVEPAILTL

Query:  LPQTSLSLSLTSSNDQ-----PNNNIPTL-MDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL
         P  +L  S ++S DQ      N+  P L M LWPL  T   +  +   S  S +    DH+YSD    VDTSLHL
Subjt:  LPQTSLSLSLTSSNDQ-----PNNNIPTL-MDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL

W9SFE8 Uncharacterized protein1.5e-0736.93Show/hide
Query:  RKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCV---LFEPSISHPHHELMMMKKKKKKKEVEPAILTL
        R+  ++    VH SSIALLQERFRQLQ++KE+REERE +++LS       ++  +   N T  C    L   S  H HH  ++  + +         L+L
Subjt:  RKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCV---LFEPSISHPHHELMMMKKKKKKKEVEPAILTL

Query:  LPQTSLSLSLTSSNDQ-----PNNNIPTL-MDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL
         P  +L  S ++S DQ      N+  P L M LWPL  T   +  +   S  S +    DH+YSD    VDTSLHL
Subjt:  LPQTSLSLSLTSSNDQ-----PNNNIPTL-MDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTAGAAAGAATGATGAAGAGGCATCTGTTGCTGTTCATTCCTCCTCCATTGCTTTACTTCAAGAGAGATTCAGACAACTACAGAAAATGAAGGAGATGAGAGA
AGAAAGAGAGTTTGTGAAATTGCTATCTCTTTCTCAATCCCCTAAAACACATAGCTGCTGCAGCTTCTTCTTCAACAATACAAATACTTGTGTGCTTTTTGAGCCTTCAA
TTTCACATCCTCATCATGAGTTGATGATGATGAAGAAGAAGAAGAAGAAGAAGGAGGTAGAACCAGCAATCTTAACATTGCTGCCTCAAACATCTCTATCTCTCTCCTTA
ACTTCTTCAAATGATCAACCCAACAATAATATCCCAACTTTGATGGACTTATGGCCACTGCCTCGTACTACTACTACTAGTACTACAACTTCTTGTGATAGTGCCATCTC
TTTTATTACTAAACTAAATGATCATGAATACTCTGACTCTGATATCGGTGTTGATACTTCTCTTCATTTGTAA
mRNA sequenceShow/hide mRNA sequence
CTTCTCTCTCTCTTACAAACCTTAAACCAAAATCAATTGTTCTTGGGGGGGTTTTATTATTATATTATTTATATCAATGGGTCTTAGAAAGAATGATGAAGAGGCATCTG
TTGCTGTTCATTCCTCCTCCATTGCTTTACTTCAAGAGAGATTCAGACAACTACAGAAAATGAAGGAGATGAGAGAAGAAAGAGAGTTTGTGAAATTGCTATCTCTTTCT
CAATCCCCTAAAACACATAGCTGCTGCAGCTTCTTCTTCAACAATACAAATACTTGTGTGCTTTTTGAGCCTTCAATTTCACATCCTCATCATGAGTTGATGATGATGAA
GAAGAAGAAGAAGAAGAAGGAGGTAGAACCAGCAATCTTAACATTGCTGCCTCAAACATCTCTATCTCTCTCCTTAACTTCTTCAAATGATCAACCCAACAATAATATCC
CAACTTTGATGGACTTATGGCCACTGCCTCGTACTACTACTACTAGTACTACAACTTCTTGTGATAGTGCCATCTCTTTTATTACTAAACTAAATGATCATGAATACTCT
GACTCTGATATCGGTGTTGATACTTCTCTTCATTTGTAAACATCAATCTCTCTCTTTCCCTCTCGATTGGCTCCGTCGTATTAGGGTTGATTATTAATTATTCATATCCG
TTATCAATTTTGTGTTATTGATCAAATCTATCGTTTTAAAGTTTTACTCTTCTAACTCTTTTTATATATTATTTATCTGTTCTTGAA
Protein sequenceShow/hide protein sequence
MGLRKNDEEASVAVHSSSIALLQERFRQLQKMKEMREEREFVKLLSLSQSPKTHSCCSFFFNNTNTCVLFEPSISHPHHELMMMKKKKKKKEVEPAILTLLPQTSLSLSL
TSSNDQPNNNIPTLMDLWPLPRTTTTSTTTSCDSAISFITKLNDHEYSDSDIGVDTSLHL