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Clc01G21960 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G21960
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein RALF-like 7
Genome locationClcChr01:33308943..33311312
RNA-Seq ExpressionClc01G21960
SyntenyClc01G21960
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058710.1 protein RALF-like 7 [Cucumis melo var. makuwa]6.0e-0643.75Show/hide
Query:  MMMVCSFMVNSTNAN-SISYGAIGGDGKPICKDGNCEGDAANGYNRGLNPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
        M+MVCS MV+ TNAN S+SYGAIG D            DA                           KC DG+C+TL DPAN YNRGCE E  CRS
Subjt:  MMMVCSFMVNSTNAN-SISYGAIGGDGKPICKDGNCEGDAANGYNRGLNPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
KAE8648219.1 hypothetical protein Csa_018424, partial [Cucumis sativus]1.9e-0760.42Show/hide
Query:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
        NP +AT + YGAI + G  +C DG C+ LGDPAN Y RGCE EE CRS
Subjt:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
KAE8648222.1 hypothetical protein Csa_023891, partial [Cucumis sativus]1.9e-0760.42Show/hide
Query:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
        NP +AT + YGAI + G  +C DG C+ LGDPAN Y RGCE EE CRS
Subjt:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
KAG6603811.1 hypothetical protein SDJN03_04420, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0754.17Show/hide
Query:  LNPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCR
        + P  A  + YGA+  + G KC DG C+TLGDPAN YNRGCE ++ CR
Subjt:  LNPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCR
KGN49664.1 hypothetical protein Csa_018501 [Cucumis sativus]1.9e-0760.42Show/hide
Query:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
        NP +AT + YGAI + G  +C DG C+ LGDPAN Y RGCE EE CRS
Subjt:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
TrEMBL top hitse value%identityAlignment
A0A0A0KJT5 Uncharacterized protein2.0e-0754.72Show/hide
Query:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRSDQIAS
        NP +AT + YG I + G  +C DG C+ LGDPAN Y RGCE EE CRS    S
Subjt:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRSDQIAS
A0A0A0KLD0 Uncharacterized protein9.0e-0860.42Show/hide
Query:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
        NP +AT + YGAI + G  +C DG C+ LGDPAN Y RGCE EE CRS
Subjt:  NPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
A0A5A7UUI8 Protein RALF-like 72.9e-0643.75Show/hide
Query:  MMMVCSFMVNSTNAN-SISYGAIGGDGKPICKDGNCEGDAANGYNRGLNPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
        M+MVCS MV+ TNAN S+SYGAIG D            DA                           KC DG+C+TL DPAN YNRGCE E  CRS
Subjt:  MMMVCSFMVNSTNAN-SISYGAIGGDGKPICKDGNCEGDAANGYNRGLNPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGGTTTGCTCGTTTATGGTAAACTCAACAAATGCAAACTCCATTAGTTATGGCGCCATCGGTGGGGATGGAAAGCCAATATGCAAAGATGGTAACTGCGAAGG
AGATGCAGCCAATGGCTATAATAGAGGATTAAATCCTATCCATGCAACCCCTATTAGTTATGGTGCTATCGCTGAGAATGGAGGAGAAAAATGCCCTGATGGTAACTGCC
AAACACTAGGAGATCCAGCCAACACTTATAACAGAGGATGTGAGACCGAAGAGCGGTGTAGATCTGATCAAATTGCTTCTAAGCCCTCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGGTTTGCTCGTTTATGGTAAACTCAACAAATGCAAACTCCATTAGTTATGGCGCCATCGGTGGGGATGGAAAGCCAATATGCAAAGATGGTAACTGCGAAGG
AGATGCAGCCAATGGCTATAATAGAGGATTAAATCCTATCCATGCAACCCCTATTAGTTATGGTGCTATCGCTGAGAATGGAGGAGAAAAATGCCCTGATGGTAACTGCC
AAACACTAGGAGATCCAGCCAACACTTATAACAGAGGATGTGAGACCGAAGAGCGGTGTAGATCTGATCAAATTGCTTCTAAGCCCTCTTTGTAA
Protein sequenceShow/hide protein sequence
MMMVCSFMVNSTNANSISYGAIGGDGKPICKDGNCEGDAANGYNRGLNPIHATPISYGAIAENGGEKCPDGNCQTLGDPANTYNRGCETEERCRSDQIASKPSL