; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G22150 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G22150
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L4
Genome locationClcChr01:33434451..33437096
RNA-Seq ExpressionClc01G22150
SyntenyClc01G22150
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002136 - Ribosomal protein L4/L1e
IPR013005 - 50S ribosomal protein uL4
IPR023574 - Ribosomal protein L4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134779.1 uncharacterized protein LOC101223158 [Cucumis sativus]2.9e-14785.93Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG
        MAISVSRRLLRS+GSL TFGQCNSSC+MS+SF N H EIYG V+GSSS FA  STLLKAGSFL SRGFCTSIL PESSN A PSELLS KPV SEERKIG
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG

Query:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI
            Y       DLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA 
Subjt:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI

Query:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
        MHGPKPRSHAFKLNKKVRRLGL IALSARVAEGK  LL+FDNL+VTTHKTKN+V YV++MENTKK+LLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY 
Subjt:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD

Query:  ILLHDTLVMSRDAVERIVTRMHTPISR
        ILLHDTLVMSRDAVERIVTRMHTPI+R
Subjt:  ILLHDTLVMSRDAVERIVTRMHTPISR

XP_008440040.1 PREDICTED: 50S ribosomal protein L4 [Cucumis melo]8.4e-14786.46Show/hide
Query:  ISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIGDI
        ISVSRRLLRSMGSL TFGQCNSSC+MSQSF N H EI G V+GSSS FA CSTLLKAG+FL SRGFC+SIL PESSN A PSELLS KPV SEERKIG  
Subjt:  ISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIGDI

Query:  LFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMH
          Y       DLMIPVTNFQNEDKGFM+LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA MH
Subjt:  LFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMH

Query:  GPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDIL
        GPKPRSHAFKLNKKVRRLGL IALSARVAEGK  LL+FDNL+VTTHKTKNIV YVN MENTKK+LLVDGGPI+EKLKLATQNLHYVNVLPSIGLNVY IL
Subjt:  GPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDIL

Query:  LHDTLVMSRDAVERIVTRMHTPISR
        LHDTLVMSRDAVERIVTRMHTPI+R
Subjt:  LHDTLVMSRDAVERIVTRMHTPISR

XP_022132909.1 uncharacterized protein LOC111005636 isoform X1 [Momordica charantia]1.2e-14584.71Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG
        MAI+VSRRLLRS+GS PTFGQCNSSC M+QS YNSH EIYGRVNG SSMFAG STLLKAG F  S+G  TSIL PESS AA PS+LLS  PV  EERKIG
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG

Query:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI
         +          DLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA 
Subjt:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI

Query:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
        MHGPKPRSHAFKLNKKVRRLGLKIALSAR AEGK  LL+FDNL+V THKTKNIVNY NEME  KKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY 
Subjt:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD

Query:  ILLHDTLVMSRDAVERIVTRMHTPISR
        ILLHDTLVMSRDA+ERIVTRMHTPI+R
Subjt:  ILLHDTLVMSRDAVERIVTRMHTPISR

XP_022950857.1 uncharacterized protein LOC111453831 [Cucurbita moschata]1.6e-14585.63Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG
        MAISVSRRLLRS+GSL TFGQCNSSC+MSQSFYNS  EIYG V GSSSMFAGCSTLLKAG+FLVS+G  TSIL PESSNA         KPVVSEERKIG
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG

Query:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI
         +          DLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA+
Subjt:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI

Query:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
        MHGPKPRSHAFKLNKKVRRLGLKIAL+AR AEGK  LLIFDNL+V THKTK +VNYVNEMENTKK+LLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY 
Subjt:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD

Query:  ILLHDTLVMSRDAVERIVTRMHTPISR
        ILLHDTLVMSRDAVERIVTRMHTPI+R
Subjt:  ILLHDTLVMSRDAVERIVTRMHTPISR

XP_038881662.1 50S ribosomal protein L4 [Benincasa hispida]1.1e-15489.91Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG
        MAISVSRRLLRSM SL TFGQCNS C+MSQSFYNSH EIYGRVNGSSS+FAGCSTLLKAGSFL SRGFC+SIL PESSNAA PS LLS KPVV EERKIG
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG

Query:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI
         +          DLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPWNQKGTGRARHGTLRGPQFRGGA 
Subjt:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI

Query:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
        MHGPKPRSHAFKLNKKVRRLGLKIALSAR AEGK  LLIFDNL+VTTHKTKNIV YVN MENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
Subjt:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD

Query:  ILLHDTLVMSRDAVERIVTRMHTPISR
        ILLHDTLVMSRDAVERIVTRMHTPISR
Subjt:  ILLHDTLVMSRDAVERIVTRMHTPISR

TrEMBL top hitse value%identityAlignment
A0A0A0KH99 Uncharacterized protein1.4e-14785.93Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG
        MAISVSRRLLRS+GSL TFGQCNSSC+MS+SF N H EIYG V+GSSS FA  STLLKAGSFL SRGFCTSIL PESSN A PSELLS KPV SEERKIG
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG

Query:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI
            Y       DLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA 
Subjt:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI

Query:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
        MHGPKPRSHAFKLNKKVRRLGL IALSARVAEGK  LL+FDNL+VTTHKTKN+V YV++MENTKK+LLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY 
Subjt:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD

Query:  ILLHDTLVMSRDAVERIVTRMHTPISR
        ILLHDTLVMSRDAVERIVTRMHTPI+R
Subjt:  ILLHDTLVMSRDAVERIVTRMHTPISR

A0A1S3B0T2 50S ribosomal protein L44.0e-14786.46Show/hide
Query:  ISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIGDI
        ISVSRRLLRSMGSL TFGQCNSSC+MSQSF N H EI G V+GSSS FA CSTLLKAG+FL SRGFC+SIL PESSN A PSELLS KPV SEERKIG  
Subjt:  ISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIGDI

Query:  LFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMH
          Y       DLMIPVTNFQNEDKGFM+LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA MH
Subjt:  LFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMH

Query:  GPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDIL
        GPKPRSHAFKLNKKVRRLGL IALSARVAEGK  LL+FDNL+VTTHKTKNIV YVN MENTKK+LLVDGGPI+EKLKLATQNLHYVNVLPSIGLNVY IL
Subjt:  GPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDIL

Query:  LHDTLVMSRDAVERIVTRMHTPISR
        LHDTLVMSRDAVERIVTRMHTPI+R
Subjt:  LHDTLVMSRDAVERIVTRMHTPISR

A0A6J1BUE8 uncharacterized protein LOC111005636 isoform X15.8e-14684.71Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG
        MAI+VSRRLLRS+GS PTFGQCNSSC M+QS YNSH EIYGRVNG SSMFAG STLLKAG F  S+G  TSIL PESS AA PS+LLS  PV  EERKIG
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG

Query:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI
         +          DLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA 
Subjt:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI

Query:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
        MHGPKPRSHAFKLNKKVRRLGLKIALSAR AEGK  LL+FDNL+V THKTKNIVNY NEME  KKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY 
Subjt:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD

Query:  ILLHDTLVMSRDAVERIVTRMHTPISR
        ILLHDTLVMSRDA+ERIVTRMHTPI+R
Subjt:  ILLHDTLVMSRDAVERIVTRMHTPISR

A0A6J1GH25 uncharacterized protein LOC1114538317.6e-14685.63Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG
        MAISVSRRLLRS+GSL TFGQCNSSC+MSQSFYNS  EIYG V GSSSMFAGCSTLLKAG+FLVS+G  TSIL PESSNA         KPVVSEERKIG
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG

Query:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI
         +          DLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA+
Subjt:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI

Query:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
        MHGPKPRSHAFKLNKKVRRLGLKIAL+AR AEGK  LLIFDNL+V THKTK +VNYVNEMENTKK+LLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY 
Subjt:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD

Query:  ILLHDTLVMSRDAVERIVTRMHTPISR
        ILLHDTLVMSRDAVERIVTRMHTPI+R
Subjt:  ILLHDTLVMSRDAVERIVTRMHTPISR

A0A6J1IUG2 uncharacterized protein LOC1114786842.2e-14585.63Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG
        MAISVSRRLLRS+GSL TFGQCNSSC+MSQSFYNS  EIYG V GSSSMFAGCSTLLKAG+FLVS+G  TSIL PESSNA         KPVVSEERKIG
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIG

Query:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI
         +          DLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHGTLRGPQFRGGA 
Subjt:  DILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAI

Query:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD
        MHGPKPRSHAFKLNKKVRRLGLKIAL+AR AEGK  LLIFDNL+V THKTK IVNYVNEMENTKK+LLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY 
Subjt:  MHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYD

Query:  ILLHDTLVMSRDAVERIVTRMHTPISR
        ILLHDTLVMSRDAVE+IVTRMHTPI+R
Subjt:  ILLHDTLVMSRDAVERIVTRMHTPISR

SwissProt top hitse value%identityAlignment
A8GVB5 50S ribosomal protein L46.0e-4750.24Show/hide
Query:  VTNFQNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKK
        + N  NE+ G + L  D+F V  IR DII +VV WQ AK   GTH TKT+SEVSGT KKP+ QKGTG AR G+LR  Q RGG ++HGP  RSHA KL KK
Subjt:  VTNFQNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKK

Query:  VRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVER
        VR+LGL  ALS + +EGK  LL+ D+L++ T KT N+VN +N+ +  K   ++DG  +D    LA QN++   V+P IG NVYDI+ H+ +++S++AV  
Subjt:  VRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVER

Query:  IVTRM
        +  R+
Subjt:  IVTRM

B6IRQ7 50S ribosomal protein L43.8e-4951.47Show/hide
Query:  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKKV
        V N  NE  G + LA +VF +P R+DI+ R+V WQLAKR+QGTH TK ISE++GT KKPW QKGTGRAR G+ R PQFRGGA + GP  RSH   L KKV
Subjt:  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKKV

Query:  RRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERI
        R+L LK ALS + AEGK  L + +  +  THKTK +   +  +  T   L++DG  +DE    A +N+ +++VLP  G NVYDIL  D LV++R+AVE++
Subjt:  RRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERI

Query:  VTRM
          R+
Subjt:  VTRM

Q1RHM2 50S ribosomal protein L46.0e-4750.24Show/hide
Query:  VTNFQNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKK
        + N  NE+ G + L  D+F V  IR DII +VV WQ AK   GTH TKT+SEVSGT KKP+ QKGTG AR G+LR  Q RGG ++HGP  RSHA KL KK
Subjt:  VTNFQNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKK

Query:  VRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVER
        VR+LGL  ALS + +EGK  LL+ D+L++ T KT N+VN +N+ +  K   ++DG  +D    LA QN++   V+P IG NVYDI+ H+ +++S++AV  
Subjt:  VRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVER

Query:  IVTRM
        +  R+
Subjt:  IVTRM

Q2RQW1 50S ribosomal protein L42.7e-4749.02Show/hide
Query:  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKKV
        V     +D G + L+  VF +P+R D++HR+VRWQLA+RQ GTH TK ISE+SGT  KP+ QKGTG AR G+ R PQFRGGA + GP  RSHA  LNKKV
Subjt:  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKKV

Query:  RRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERI
        R+LGLK ALSA+   G+  L++ D     + KTK+++  +  +   +K+L +DG  ++EK  LA +N+  ++VLP  G NVYDIL  DTLV++++AV+ +
Subjt:  RRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERI

Query:  VTRM
          R+
Subjt:  VTRM

Q2W2J2 50S ribosomal protein L45.4e-4850.49Show/hide
Query:  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKKV
        V +  N+  G + LA ++F VP+R DI+ R V WQLAKRQ G H TKTISE+SGT KKP+ QKG GRAR G+LR  QFRGG+ + GP  RSHA  L KKV
Subjt:  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKKV

Query:  RRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERI
        R+L LK ALSA+VA+GK  L++ D     + KTK++   + ++     +L +DG  +D    LA++N+ YV+VLP+ G NVYDIL  DTLV+++DAV  +
Subjt:  RRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERI

Query:  VTRM
          R+
Subjt:  VTRM

Arabidopsis top hitse value%identityAlignment
AT1G07320.1 ribosomal protein L46.4e-2031.43Show/hide
Query:  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNK
        +P+ +F+ E  G   L          + ++HR +   L  +++GT ST T  EV G G KP++QK TG AR G+ R P   GG ++ GP+P+  + K+N+
Subjt:  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNK

Query:  KVRRLGLKIAL-SARVAEGKAGLLIFDNLEVTTHKTKNIVNYVN----EMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMS
        K ++L +  AL SA  AEG A ++     +    KTK+ +  +     + +     L++D   +DE +  +++N+  + +L    LN++DIL  D LV++
Subjt:  KVRRLGLKIAL-SARVAEGKAGLLIFDNLEVTTHKTKNIVNYVN----EMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMS

Query:  RDAVERIVTR
          AVE +  R
Subjt:  RDAVERIVTR

AT1G07320.2 ribosomal protein L46.4e-2031.43Show/hide
Query:  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNK
        +P+ +F+ E  G   L          + ++HR +   L  +++GT ST T  EV G G KP++QK TG AR G+ R P   GG ++ GP+P+  + K+N+
Subjt:  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNK

Query:  KVRRLGLKIAL-SARVAEGKAGLLIFDNLEVTTHKTKNIVNYVN----EMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMS
        K ++L +  AL SA  AEG A ++     +    KTK+ +  +     + +     L++D   +DE +  +++N+  + +L    LN++DIL  D LV++
Subjt:  KVRRLGLKIAL-SARVAEGKAGLLIFDNLEVTTHKTKNIVNYVN----EMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMS

Query:  RDAVERIVTR
          AVE +  R
Subjt:  RDAVERIVTR

AT1G07320.3 ribosomal protein L46.4e-2031.43Show/hide
Query:  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNK
        +P+ +F+ E  G   L          + ++HR +   L  +++GT ST T  EV G G KP++QK TG AR G+ R P   GG ++ GP+P+  + K+N+
Subjt:  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNK

Query:  KVRRLGLKIAL-SARVAEGKAGLLIFDNLEVTTHKTKNIVNYVN----EMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMS
        K ++L +  AL SA  AEG A ++     +    KTK+ +  +     + +     L++D   +DE +  +++N+  + +L    LN++DIL  D LV++
Subjt:  KVRRLGLKIAL-SARVAEGKAGLLIFDNLEVTTHKTKNIVNYVN----EMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMS

Query:  RDAVERIVTR
          AVE +  R
Subjt:  RDAVERIVTR

AT1G07320.4 ribosomal protein L46.4e-2031.43Show/hide
Query:  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNK
        +P+ +F+ E  G   L          + ++HR +   L  +++GT ST T  EV G G KP++QK TG AR G+ R P   GG ++ GP+P+  + K+N+
Subjt:  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNK

Query:  KVRRLGLKIAL-SARVAEGKAGLLIFDNLEVTTHKTKNIVNYVN----EMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMS
        K ++L +  AL SA  AEG A ++     +    KTK+ +  +     + +     L++D   +DE +  +++N+  + +L    LN++DIL  D LV++
Subjt:  KVRRLGLKIAL-SARVAEGKAGLLIFDNLEVTTHKTKNIVNYVN----EMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMS

Query:  RDAVERIVTR
          AVE +  R
Subjt:  RDAVERIVTR

AT2G20060.1 Ribosomal protein L4/L1 family1.1e-11267.07Show/hide
Query:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVS-RGFCTSILIPESSNAALPSELLSTKPVVSEERKI
        MA S+SRR+ R+ GS    G+ +SS ++S              N S +  A  +  LK G  L+S R   TSIL P+ S    PS+LL+ K V++ +R I
Subjt:  MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVS-RGFCTSILIPESSNAALPSELLSTKPVVSEERKI

Query:  GDILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGA
        G         +  DL+IPVTNFQNE+KGFMVLAGDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTG+KPWNQKGTGRARHGTLRGPQFRGG 
Subjt:  GDILFYSIMEEGLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGA

Query:  IMHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY
        +MHGPKPRSHA K+NK+VRRLGLKIAL+AR AEGK  LL+FD+L + THKTKNIVNY N+MENTKK+L+V+GGPIDEKLKLATQNLHYVN++PSIGLNVY
Subjt:  IMHGPKPRSHAFKLNKKVRRLGLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVY

Query:  DILLHDTLVMSRDAVERIVTRMHTPISR
         ILLHDTL+MSRDAV +IV RMHTPI+R
Subjt:  DILLHDTLVMSRDAVERIVTRMHTPISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCTCAGTGTCGAGAAGGCTTTTACGCTCTATGGGGTCCTTACCAACATTTGGGCAATGTAATTCTTCGTGTAGTATGAGTCAGTCATTTTATAATTCCCATGT
AGAAATTTATGGCCGTGTTAATGGGAGTAGCTCCATGTTTGCGGGCTGTTCTACCCTTTTGAAGGCTGGATCCTTTCTTGTTTCCCGAGGGTTTTGCACCTCAATTTTGA
TTCCTGAATCAAGCAATGCTGCATTGCCTTCTGAGTTACTGTCCACTAAGCCGGTGGTATCAGAAGAGCGCAAGATAGGCGATATTCTGTTCTACTCTATTATGGAAGAA
GGATTGGACCTGATGATTCCTGTGACTAACTTTCAAAATGAGGACAAAGGCTTCATGGTCTTGGCTGGAGATGTTTTTGACGTTCCAATCAGGAAGGACATCATTCATCG
GGTTGTTAGATGGCAGCTTGCAAAGAGACAGCAGGGAACGCATTCGACAAAAACAATTAGTGAGGTTAGTGGAACAGGAAAAAAGCCATGGAATCAAAAAGGTACTGGCA
GAGCAAGGCATGGAACTCTGCGTGGTCCCCAGTTCAGAGGTGGTGCAATTATGCATGGTCCTAAACCACGAAGTCATGCTTTTAAGCTTAATAAGAAAGTTCGTCGCTTG
GGTTTGAAGATTGCTCTTTCAGCTCGTGTTGCAGAAGGAAAGGCAGGTCTTCTGATATTTGATAATTTGGAAGTAACTACACATAAGACGAAGAATATTGTGAACTATGT
CAATGAAATGGAAAATACTAAAAAACTACTTCTAGTTGATGGTGGCCCCATAGATGAGAAGCTGAAGTTGGCCACGCAAAACCTTCATTACGTCAATGTTTTGCCTTCTA
TAGGTTTGAACGTTTATGACATTCTTCTACATGATACTCTTGTGATGTCTCGTGATGCTGTAGAAAGAATCGTTACCCGGATGCACACTCCAATCAGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATCTCAGTGTCGAGAAGGCTTTTACGCTCTATGGGGTCCTTACCAACATTTGGGCAATGTAATTCTTCGTGTAGTATGAGTCAGTCATTTTATAATTCCCATGT
AGAAATTTATGGCCGTGTTAATGGGAGTAGCTCCATGTTTGCGGGCTGTTCTACCCTTTTGAAGGCTGGATCCTTTCTTGTTTCCCGAGGGTTTTGCACCTCAATTTTGA
TTCCTGAATCAAGCAATGCTGCATTGCCTTCTGAGTTACTGTCCACTAAGCCGGTGGTATCAGAAGAGCGCAAGATAGGCGATATTCTGTTCTACTCTATTATGGAAGAA
GGATTGGACCTGATGATTCCTGTGACTAACTTTCAAAATGAGGACAAAGGCTTCATGGTCTTGGCTGGAGATGTTTTTGACGTTCCAATCAGGAAGGACATCATTCATCG
GGTTGTTAGATGGCAGCTTGCAAAGAGACAGCAGGGAACGCATTCGACAAAAACAATTAGTGAGGTTAGTGGAACAGGAAAAAAGCCATGGAATCAAAAAGGTACTGGCA
GAGCAAGGCATGGAACTCTGCGTGGTCCCCAGTTCAGAGGTGGTGCAATTATGCATGGTCCTAAACCACGAAGTCATGCTTTTAAGCTTAATAAGAAAGTTCGTCGCTTG
GGTTTGAAGATTGCTCTTTCAGCTCGTGTTGCAGAAGGAAAGGCAGGTCTTCTGATATTTGATAATTTGGAAGTAACTACACATAAGACGAAGAATATTGTGAACTATGT
CAATGAAATGGAAAATACTAAAAAACTACTTCTAGTTGATGGTGGCCCCATAGATGAGAAGCTGAAGTTGGCCACGCAAAACCTTCATTACGTCAATGTTTTGCCTTCTA
TAGGTTTGAACGTTTATGACATTCTTCTACATGATACTCTTGTGATGTCTCGTGATGCTGTAGAAAGAATCGTTACCCGGATGCACACTCCAATCAGCCGCTGA
Protein sequenceShow/hide protein sequence
MAISVSRRLLRSMGSLPTFGQCNSSCSMSQSFYNSHVEIYGRVNGSSSMFAGCSTLLKAGSFLVSRGFCTSILIPESSNAALPSELLSTKPVVSEERKIGDILFYSIMEE
GLDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWNQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAFKLNKKVRRL
GLKIALSARVAEGKAGLLIFDNLEVTTHKTKNIVNYVNEMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTRMHTPISR