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Clc01G22430 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G22430
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAutophagy-related protein
Genome locationClcChr01:33588970..33590932
RNA-Seq ExpressionClc01G22430
SyntenyClc01G22430
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0005874 - microtubule (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603779.1 Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5592.68Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKLGIPLEKR+AEAAR++EKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQFVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTFGGFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

XP_004134765.1 autophagy-related protein 8C [Cucumis sativus]4.4e-5695.12Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSS KLGIPLEKR AEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTFGGFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

XP_008439996.1 PREDICTED: autophagy-related protein 8C [Cucumis melo]1.0e-5796.75Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKLGIPLEKRQAEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTFGGFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

XP_022142105.1 autophagy-related protein 8C-like [Momordica charantia]1.8e-5493.5Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKLGIPLE+RQAEAARI+EKYP+RIPVIVEKAGRSNIADID+NKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTF GFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

XP_022950063.1 autophagy-related protein 8C-like [Cucurbita moschata]3.7e-5591.87Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKLGIPLE+R+AEAAR++EKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQFVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTFGGFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJW7 Autophagy-related protein2.1e-5695.12Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSS KLGIPLEKR AEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTFGGFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

A0A1S3B043 Autophagy-related protein5.0e-5896.75Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKLGIPLEKRQAEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTFGGFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

A0A5D3CPT6 Autophagy-related protein5.0e-5896.75Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKLGIPLEKRQAEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTFGGFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

A0A6J1CL79 Autophagy-related protein8.9e-5593.5Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKLGIPLE+RQAEAARI+EKYP+RIPVIVEKAGRSNIADID+NKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTF GFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

A0A6J1GDU9 Autophagy-related protein1.8e-5591.87Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKLGIPLE+R+AEAAR++EKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQFVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFLGEQ
        DEDGFLYMSYSGENTFGGFLG Q
Subjt:  DEDGFLYMSYSGENTFGGFLGEQ

SwissProt top hitse value%identityAlignment
A2YS06 Autophagy-related protein 8C8.3e-5084.17Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKL  PLE+RQAEA RI+EKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVK+TLP T ALMSAIY +NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFL
        DEDGFLYM+YSGENTFG F+
Subjt:  DEDGFLYMSYSGENTFGGFL

M1C146 Autophagy-related protein 8C-like7.0e-4982.35Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MA+SSFKL  PLE+RQAEAARI+EKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVK+ LP T A+MSAIY ++K
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGF
        DEDGFLYM+YSGENTFG F
Subjt:  DEDGFLYMSYSGENTFGGF

Q6Z1D5 Autophagy-related protein 8C8.3e-5084.17Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MARSSFKL  PLE+RQAEA RI+EKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVK+TLP T ALMSAIY +NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGFL
        DEDGFLYM+YSGENTFG F+
Subjt:  DEDGFLYMSYSGENTFGGFL

Q8LEM4 Autophagy-related protein 8a2.9e-4779.49Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MA+SSFK+  PLE R +E++RI+EKYPDRIPVIVEKAG+S++ DID+ KYLVPADLTVGQFVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++K
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFG
        DEDGFLYM+YSGENTFG
Subjt:  DEDGFLYMSYSGENTFG

Q8S927 Autophagy-related protein 8c5.0e-4780.34Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MA SSFKL  PLE+RQ E++RI+EKYPDRIPVIVE+A RS++ +ID+ KYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY +NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFG
        DEDGFLYM+YSGENTFG
Subjt:  DEDGFLYMSYSGENTFG

Arabidopsis top hitse value%identityAlignment
AT1G62040.1 Ubiquitin-like superfamily protein3.6e-4880.34Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MA SSFKL  PLE+RQ E++RI+EKYPDRIPVIVE+A RS++ +ID+ KYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY +NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFG
        DEDGFLYM+YSGENTFG
Subjt:  DEDGFLYMSYSGENTFG

AT1G62040.2 Ubiquitin-like superfamily protein3.6e-4880.34Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MA SSFKL  PLE+RQ E++RI+EKYPDRIPVIVE+A RS++ +ID+ KYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY +NK
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFG
        DEDGFLYM+YSGENTFG
Subjt:  DEDGFLYMSYSGENTFG

AT2G05630.1 Ubiquitin-like superfamily protein7.9e-4880.67Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MA SSFK   PLEKRQAEAARI+EKYPDRIPVIVE+A +S++ DIDR KYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVK+ LP T A+MSAIY ++K
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFGGF
        DEDGFLYMSYSGENTFG F
Subjt:  DEDGFLYMSYSGENTFGGF

AT4G21980.1 Ubiquitin-like superfamily protein2.1e-4879.49Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MA+SSFK+  PLE R +E++RI+EKYPDRIPVIVEKAG+S++ DID+ KYLVPADLTVGQFVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++K
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFG
        DEDGFLYM+YSGENTFG
Subjt:  DEDGFLYMSYSGENTFG

AT4G21980.2 Ubiquitin-like superfamily protein2.1e-4879.49Show/hide
Query:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK
        MA+SSFK+  PLE R +E++RI+EKYPDRIPVIVEKAG+S++ DID+ KYLVPADLTVGQFVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++K
Subjt:  MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNK

Query:  DEDGFLYMSYSGENTFG
        DEDGFLYM+YSGENTFG
Subjt:  DEDGFLYMSYSGENTFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAAGCTCGTTCAAACTCGGAATTCCTTTAGAAAAGAGGCAGGCCGAAGCTGCTCGCATTAAAGAAAAGTACCCGGACAGAATACCTGTGATTGTCGAGAAAGC
TGGGAGGAGTAACATTGCTGATATTGATAGGAACAAATATCTCGTCCCCGCGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGTAAACGGATTAAGCTTAGCGCTG
AGAAAGCTATATTTGTATTTGTCAAGGACACTCTACCTTCAACTGGTGCATTGATGTCTGCAATTTATGCGGATAATAAGGATGAAGATGGTTTTCTTTACATGTCATAC
AGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGAACAATGA
mRNA sequenceShow/hide mRNA sequence
TGCTAATACGTGTTTGAAGTGGAAAGAGCTTCGTTTATCTACGAAACACACGAGTCATGATCATCTACTCTCTGTTTTTAAATTCTCCTTTCGTATTATCCAATTCTTCT
CATTCTCACTCCTTTTTGCCGATTCATCACTCAAATACTGAATTTCCAGACCCCCTTTTTTGATCTTCTCTTTGACTGGCCACCAATCGTAGCGTGAGATTCTAATTTCT
TCCATGGCCAGAAGCTCGTTCAAACTCGGAATTCCTTTAGAAAAGAGGCAGGCCGAAGCTGCTCGCATTAAAGAAAAGTACCCGGACAGAATACCTGTGATTGTCGAGAA
AGCTGGGAGGAGTAACATTGCTGATATTGATAGGAACAAATATCTCGTCCCCGCGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGTAAACGGATTAAGCTTAGCG
CTGAGAAAGCTATATTTGTATTTGTCAAGGACACTCTACCTTCAACTGGTGCATTGATGTCTGCAATTTATGCGGATAATAAGGATGAAGATGGTTTTCTTTACATGTCA
TACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGAACAATGATACATTTCCCTGTAAATTCTAGCTCTGCCCTTCAGATCAATCAATGCATCAGCTTTATGTTCCAT
TCTATTCTAGTATATTTAAGTTTCCATCAAAGGTGTTGCTCAAGGAGTGGCCCTGAATGTTTTAGTTTTTTTCCCTTCATCAATTGAGACTGTGAACCAATAAAATAGCT
ATTGGCATCTTTCTAGTTGTATATCAAGCAGCGAAATGATTAAACTTTCTGATC
Protein sequenceShow/hide protein sequence
MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSY
SGENTFGGFLGEQ