CuGenDBv2

Gene ID	Clc01G22530
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.
Genome location	ClcChr01:33645793..33646213
RNA-Seq Expression	Clc01G22530
Synteny	Clc01G22530
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6603773.1 hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-35

68.25

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---
        MGNCCR QSS P +   NRR  P +N RQR+   SS  CS+T K  KEGN++E+KIRMTKKEL+ELVGWLNMADSSFE VMARLVN+IS+QNG++++   
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---

Query:  ----QMVKLRQQRSWRPSLQSIPEII
            QMVKLRQQRSWRPSLQSIPEII
Subjt:  ----QMVKLRQQRSWRPSLQSIPEII

KAG7033944.1 hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.4e-35

68.25

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---
        MGNCCR QSS P +   NRR  P +N RQR+   SS  CS+T K  KEGN++E+KIRMTKKEL+ELVGWLNMADSSFE VMARLVN+IS+QNG++++   
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---

Query:  ----QMVKLRQQRSWRPSLQSIPEII
            QMVKLRQQRSWRPSLQSIPEII
Subjt:  ----QMVKLRQQRSWRPSLQSIPEII

XP_008441100.1 PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo]

5.2e-38

73.33

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM
        MGNCC+ Q S P     +RRTPP +NHRQR+    S  CS      KE NL+EVKIRMTKKELEELVGWLNMADSSFEHVMARLVN+I+DQNG+ NNDQ+
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM

Query:  VKLRQQRSWRPSLQSIPEII
        VKLRQQRSWRPSLQSIPEII
Subjt:  VKLRQQRSWRPSLQSIPEII

XP_022977330.1 uncharacterized protein LOC111477681 [Cucurbita maxima]

3.7e-36

69.84

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNG-------
        MGNCCR QSS P +  G+RR  P +N RQR+    S  CS+T K  KEGNL+E+KIRMTKKEL+EL+GWLNMADSSFE VMARLVN+ISDQNG       
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNG-------

Query:  ENNDQMVKLRQQRSWRPSLQSIPEII
        EN  QMVKLRQQRSWRPSLQSIPEII
Subjt:  ENNDQMVKLRQQRSWRPSLQSIPEII

XP_023544016.1 uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo]

2.0e-34

66.67

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---
        MGNCCR QSS P +  G+RR  P +N  QR  R  ++ CS+T K  KEGNL+E+KIRMTKKEL+ELVGWLNMADSSFE VMARLVN+IS+ NG++++   
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---

Query:  ----QMVKLRQQRSWRPSLQSIPEII
            QMVKLRQQRSWRPSLQSIPEII
Subjt:  ----QMVKLRQQRSWRPSLQSIPEII

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHU7 Uncharacterized protein

2.2e-34

68.33

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM
        MGNCC++QSS P ME  +  TPP++NH QR+ +  S          KE NL+EVKIRMTKKEL+ELVGWLNMADSSFE VMARLVN+I+ QNG+ NNDQ+
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM

Query:  VKLRQQRSWRPSLQSIPEII
        VKLRQQRSWRPSLQSIPE+I
Subjt:  VKLRQQRSWRPSLQSIPEII

A0A1S3B2N5 uncharacterized protein LOC103485326

2.5e-38

73.33

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM
        MGNCC+ Q S P     +RRTPP +NHRQR+    S  CS      KE NL+EVKIRMTKKELEELVGWLNMADSSFEHVMARLVN+I+DQNG+ NNDQ+
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM

Query:  VKLRQQRSWRPSLQSIPEII
        VKLRQQRSWRPSLQSIPEII
Subjt:  VKLRQQRSWRPSLQSIPEII

A0A200QLU8 Uncharacterized protein

2.1e-08

36.03

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Query:  MGNCCRSQSSI--PAMEYGNRRTPPWRNHRQRKPRGS-----SHYCSSTHKDPKEGNLK-----------EVKIRMTKKELEELVGWLNMADSSFEHVMA
        MGNCCR +SS      ++G  ++  +     +    S      +  S TH   +  N K           EVKIR+TKKELEEL+G +++   S E ++A
Subjt:  MGNCCRSQSSI--PAMEYGNRRTPPWRNHRQRKPRGS-----SHYCSSTHKDPKEGNLK-----------EVKIRMTKKELEELVGWLNMADSSFEHVMA

Query:  RLVNIISDQNGENNDQMVKLRQQRSWRPSLQSIPEI
        +L+N  SD +  +        QQRSWRP+LQSIPE+
Subjt:  RLVNIISDQNGENNDQMVKLRQQRSWRPSLQSIPEI

A0A5D3CNX5 Uncharacterized protein

2.5e-38

73.33

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM
        MGNCC+ Q S P     +RRTPP +NHRQR+    S  CS      KE NL+EVKIRMTKKELEELVGWLNMADSSFEHVMARLVN+I+DQNG+ NNDQ+
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM

Query:  VKLRQQRSWRPSLQSIPEII
        VKLRQQRSWRPSLQSIPEII
Subjt:  VKLRQQRSWRPSLQSIPEII

A0A6J1IM02 uncharacterized protein LOC111477681

1.8e-36

69.84

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Query:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNG-------
        MGNCCR QSS P +  G+RR  P +N RQR+    S  CS+T K  KEGNL+E+KIRMTKKEL+EL+GWLNMADSSFE VMARLVN+ISDQNG       
Subjt:  MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNG-------

Query:  ENNDQMVKLRQQRSWRPSLQSIPEII
        EN  QMVKLRQQRSWRPSLQSIPEII
Subjt:  ENNDQMVKLRQQRSWRPSLQSIPEII

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.

7.3e-06

30.77

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Query:  MGNCCRSQSSI--PAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNL----------KEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNII
        MGNC R +S +     ++    T    +H         HY S T +D K   +           E+KIR+TKK+L +L+  +N+ D +F+        + 
Subjt:  MGNCCRSQSSI--PAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNL----------KEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNII

Query:  SDQNGENNDQMVKLRQQRSWRPSLQSIPEI
              NN    +  QQR WRP LQSIPE+
Subjt:  SDQNGENNDQMVKLRQQRSWRPSLQSIPEI

AT4G21920.1 unknown protein

3.1e-04

28.24

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Query:  MGNC-CRSQSSIPAMEYGNRRTPPWRNHRQR------------KPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNI
        MGNC C ++ +  +    +  +   R  R+R            K  G +   +ST         +E+KIR+TKKELE+L+  + +   + E ++++L+  
Subjt:  MGNC-CRSQSSIPAMEYGNRRTPPWRNHRQR------------KPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNI

Query:  ISDQNGENNDQMVKLRQQRSWRPSLQSIPEI
          DQ G +   +    Q   W+P LQSIPE+
Subjt:  ISDQNGENNDQMVKLRQQRSWRPSLQSIPEI

Sequences

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CDS sequence

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ATGGGTAACTGTTGCAGAAGTCAATCCTCCATTCCGGCGATGGAATACGGCAACCGGAGGACTCCGCCGTGGAGGAACCACCGTCAGAGAAAGCCTAGAGGTAGTTCTCA
TTATTGTTCTAGTACGCACAAGGATCCAAAAGAAGGTAATTTAAAAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGG
ATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTTAACATTATTAGCGATCAAAACGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAACAACGTTCATGGAGGCCT
TCTTTGCAAAGCATTCCTGAGATAATTTGA

mRNA sequence

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CATATATCCACCAAGAGACAATACAAATTCAATTCTTACCAAACACATGGGTAACTGTTGCAGAAGTCAATCCTCCATTCCGGCGATGGAATACGGCAACCGGAGGACTC
CGCCGTGGAGGAACCACCGTCAGAGAAAGCCTAGAGGTAGTTCTCATTATTGTTCTAGTACGCACAAGGATCCAAAAGAAGGTAATTTAAAAGAGGTGAAAATAAGGATG
ACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGGATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTTAACATTATTAGCGATCAAAACGGTGAAAA
TAATGACCAAATGGTGAAATTGCGTCAACAACGTTCATGGAGGCCTTCTTTGCAAAGCATTCCTGAGATAATTTGAAGTACGTATATGTAA

Protein sequence

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MGNCCRSQSSIPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENNDQMVKLRQQRSWRP
SLQSIPEII

Clc01G22530 (gene) of Watermelon (cordophanus) v2 genome