CuGenDBv2

Gene ID	Clc01G22540
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Genome location	ClcChr01:33650766..33651558
RNA-Seq Expression	Clc01G22540
Synteny	Clc01G22540
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN49119.1 hypothetical protein Csa_003853 [Cucumis sativus]

6.4e-46

87.5

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MS V  +R NGY KVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLK+RFGRRLK+LKKSAM SISTLKIGVYKQV++QIRNCKSLFGRKQ
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        TNF +FP+LLSS
Subjt:  TNFPDFPLLLSS

XP_008439979.1 PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo]

5.4e-45

86.61

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFV  +RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLK+RFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQ
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        T F +FP+LLSS
Subjt:  TNFPDFPLLLSS

XP_022142336.1 uncharacterized protein LOC111012478 [Momordica charantia]

2.5e-42

82.14

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSF+ IRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLK+RFGRRLKKLKKSA+ASIS  KIGVYKQV+ Q+RNCKSLFGRK+
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
            +    LSS
Subjt:  TNFPDFPLLLSS

XP_023003962.1 uncharacterized protein LOC111497408 [Cucurbita maxima]

3.3e-42

81.25

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFV ++  NGYSKVDKEDPEEIIHRRAQF+INKVLERADSMGK SYLRIRIRRL++RFGRRLKKLKKSAMASI  +KI VYKQ++ QIRNCKSLFGRK+
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        TNF + P LLSS
Subjt:  TNFPDFPLLLSS

XP_038883675.1 uncharacterized protein LOC120074584 [Benincasa hispida]

4.3e-50

94.64

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFV IRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLK+RFGRRLKKLKKSAMASISTLKIGVYKQV+SQIRNCKSLFG KQ
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        T+FP+FPLLLSS
Subjt:  TNFPDFPLLLSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJX3 Uncharacterized protein

3.1e-46

87.5

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MS V  +R NGY KVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLK+RFGRRLK+LKKSAM SISTLKIGVYKQV++QIRNCKSLFGRKQ
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        TNF +FP+LLSS
Subjt:  TNFPDFPLLLSS

A0A1S3B0N9 uncharacterized protein LOC103484604

2.6e-45

86.61

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFV  +RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLK+RFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQ
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        T F +FP+LLSS
Subjt:  TNFPDFPLLLSS

A0A5D3CMA4 Uncharacterized protein

2.6e-45

86.61

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFV  +RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLK+RFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQ
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        T F +FP+LLSS
Subjt:  TNFPDFPLLLSS

A0A6J1CLW2 uncharacterized protein LOC111012478

1.2e-42

82.14

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSF+ IRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLK+RFGRRLKKLKKSA+ASIS  KIGVYKQV+ Q+RNCKSLFGRK+
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
            +    LSS
Subjt:  TNFPDFPLLLSS

A0A6J1KP23 uncharacterized protein LOC111497408

1.6e-42

81.25

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Query:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFV ++  NGYSKVDKEDPEEIIHRRAQF+INKVLERADSMGK SYLRIRIRRL++RFGRRLKKLKKSAMASI  +KI VYKQ++ QIRNCKSLFGRK+
Subjt:  MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        TNF + P LLSS
Subjt:  TNFPDFPLLLSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G11655.1 unknown protein

2.2e-12

38.83

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Query:  RRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGK----PSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLF-GRKQT
        +RP  YSK+DKEDPEE++ RRA+FLI K L+ AD + +     S++R+++  LK++ G+RL KL++S ++++     G+ K   + +R  K +F G   T
Subjt:  RRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGK----PSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLF-GRKQT

Query:  NFP
          P
Subjt:  NFP

AT4G04745.1 unknown protein

4.1e-11

37.5

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Query:  PNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLR---------IRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        P  Y+K++KEDP+E+IHRRAQFLI KVLERADS  +    R         IR+  +++R G++L+KL+K+     + L     K     +  C S     
Subjt:  PNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLR---------IRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFPDFPLLLS
             D P L S
Subjt:  QTNFPDFPLLLS

AT4G21902.1 unknown protein

5.1e-09

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Query:  IRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKIRFGRRLKKLKKSAM
        ++ PN Y+K++KED  EIIHRRAQFLI+K+L+RAD         + + +++   R+  ++++ G++L+KL+KS +
Subjt:  IRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKIRFGRRLKKLKKSAM

Sequences

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CDS sequence

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ATGAGTTTTGTTCACATTAGGAGGCCAAATGGTTACTCCAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTG
TTGGAACGAGCAGATTCCATGGGGAAACCTTCGTATTTGAGAATTAGAATTCGGAGGCTGAAGATTAGATTTGGGAGAAGATTGAAGAAGCTAAAGAAGAGTGCA
ATGGCAAGTATTTCAACTCTCAAGATTGGTGTTTACAAGCAAGTCGTTTCTCAGATCAGAAATTGCAAGTCTTTGTTTGGCCGAAAACAAACTAACTTTCCCGAT
TTTCCTCTTTTGTTATCATCTTGA

mRNA sequence

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TATAAGTTAAGATATATACATATATATATATTATTTTCCTGGTTTAAGATATAATGGGAATCATATACACATGATCTGAAGGCCAGCTCAGGAGCTGCTTGGTCT
CTCTTCCATAATTTAAAGCACATGCTGTGCTAGCTTGCTTCTTCATTGCCTTATGGATGACCTTCTTCATTGACCCCACAGCCAAAGTTCACACTTACCCATTTC
CACACAACTTCACTCATAAAATGCCATTTCTCCACTCAAACTCTCTCCACTGCCTACATATTGAGCTTAGTTTAGAATCTCTCTCTAATTTTCTAAGTTGAGAAG
AGAGATGAGTTTTGTTCACATTAGGAGGCCAAATGGTTACTCCAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAA
AGTGTTGGAACGAGCAGATTCCATGGGGAAACCTTCGTATTTGAGAATTAGAATTCGGAGGCTGAAGATTAGATTTGGGAGAAGATTGAAGAAGCTAAAGAAGAG
TGCAATGGCAAGTATTTCAACTCTCAAGATTGGTGTTTACAAGCAAGTCGTTTCTCAGATCAGAAATTGCAAGTCTTTGTTTGGCCGAAAACAAACTAACTTTCC
CGATTTTCCTCTTTTGTTATCATCTTGAAGTGAACTCACCATAGTTTCTTCAGCCAAATCATTGGGATAATGACTTCTGTTTTCCCTTGGAGCTTTAATTTTGTT
CATGAGCTGTTATATGAAAGAAAATTTTATTAAGCATTTATTTGGGTGCTTTTTTTTT

Protein sequence

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MSFVHIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKIRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFPD
FPLLLSS

Clc01G22540 (gene) of Watermelon (cordophanus) v2 genome