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Clc01G22650 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G22650
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCysteine-rich PDZ-binding protein
Genome locationClcChr01:33721364..33723120
RNA-Seq ExpressionClc01G22650
SyntenyClc01G22650
Gene Ontology termsGO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR019367 - PDZ-binding protein, CRIPT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134750.1 cysteine-rich PDZ-binding protein [Cucumis sativus]1.5e-4694Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
XP_021887355.1 cysteine-rich PDZ-binding protein [Carica papaya]5.7e-4693Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKLSKVIVPDKWKEGASNT E+GGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
XP_022142069.1 cysteine-rich PDZ-binding protein [Momordica charantia]7.4e-4692Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKL+KVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
XP_022950220.1 cysteine-rich PDZ-binding protein [Cucurbita moschata]7.4e-4693Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
XP_038882901.1 cysteine-rich PDZ-binding protein [Benincasa hispida]5.1e-4795Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
TrEMBL top hitse value%identityAlignment
A0A0A0KHE3 Cysteine-rich PDZ-binding protein7.2e-4794Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
A0A1S3B0M5 Cysteine-rich PDZ-binding protein7.2e-4794Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
A0A5D3CPV5 Cysteine-rich PDZ-binding protein7.2e-4794Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
A0A6J1CKJ0 Cysteine-rich PDZ-binding protein3.6e-4692Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKL+KVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
A0A6J1IVK1 Cysteine-rich PDZ-binding protein3.6e-4693Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEK     EKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
SwissProt top hitse value%identityAlignment
O70333 Cysteine-rich PDZ-binding protein1.1e-2863.81Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFY
        MVCEK     EKKL +VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK Y
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFY

Query:  KQSNV
        KQ++V
Subjt:  KQSNV
Q3ZC66 Cysteine-rich PDZ-binding protein2.5e-2863.81Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFY
        MVCEK     EKKL  VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK Y
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFY

Query:  KQSNV
        KQ++V
Subjt:  KQSNV
Q567Z6 Cysteine-rich PDZ-binding protein2.5e-2861.9Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLL-SKKKRWTPYGNT---KCIICKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFY
        MVCEK     EKKL +VI PD WK+GA NT ESGGRK+NENK+L SKK R+ PYG +    C ICK  VHQ  + YC  CAY KG+CAMCGK+V+DTK Y
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLL-SKKKRWTPYGNT---KCIICKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFY

Query:  KQSNV
        KQ++V
Subjt:  KQSNV
Q792Q4 Cysteine-rich PDZ-binding protein1.1e-2863.81Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFY
        MVCEK     EKKL +VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK Y
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFY

Query:  KQSNV
        KQ++V
Subjt:  KQSNV
Q9P021 Cysteine-rich PDZ-binding protein2.5e-2863.81Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFY
        MVCEK     EKKL  VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK Y
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFY

Query:  KQSNV
        KQ++V
Subjt:  KQSNV
Arabidopsis top hitse value%identityAlignment
AT1G61780.1 postsynaptic protein-related1.4e-4280.39Show/hide
Query:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYG--NTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQS
        MVC+K     EKKLSKVIVPDKWK+GA N  E GGRKINENKLLSKK RW+PY    TKC+ICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTK YKQS
Subjt:  MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYG--NTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQS

Query:  NV
        NV
Subjt:  NV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGCGAGAAGTTTGTGGATGTAGGTGAAAAGAAGCTATCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGTGCAAGCAACACACAAGAAAGCGGTGGCCGAAA
AATTAACGAAAACAAGCTCCTCTCCAAAAAGAAAAGGTGGACTCCTTATGGAAACACCAAGTGCATAATTTGTAAGCAGCAGGTGCACCAGGATGCCAAGTATTGTCACA
CATGTGCTTACAGCAAAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTTTTACAAACAGAGCAACGTGTGA
mRNA sequenceShow/hide mRNA sequence
AGATAACCTTATTCTTTTTTCTTCTCTCTCTCTTTTTTTTCCCTCAAAAATCATTCGCGGATAATAAAGAAAGATGATTTGATCATTCGATCAGAGAAAAGGGTTGTGAA
TTTGTGATTTGCCATTGCGACCCTCCTATTTACTTTTTACAATTTTGACGAACTTCTGGTCGAATCCTCTTCCTCTTCCTCCATTGATCTCTAATTAGGGCTCTGATCAA
ATTCGTTGGTATATTCGATTTCAGTATCGCCTAACCGAGCAGTTCAGCCATGGTCTGCGAGAAGTTTGTGGATGTAGGTGAAAAGAAGCTATCGAAGGTGATAGTGCCGG
ACAAGTGGAAAGAAGGTGCAAGCAACACACAAGAAAGCGGTGGCCGAAAAATTAACGAAAACAAGCTCCTCTCCAAAAAGAAAAGGTGGACTCCTTATGGAAACACCAAG
TGCATAATTTGTAAGCAGCAGGTGCACCAGGATGCCAAGTATTGTCACACATGTGCTTACAGCAAAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTT
TTACAAACAGAGCAACGTGTGATTAGAAGCCAGAATTGATATTCAACTTGTAACTTCATCATCAAGGGTTAATAACATGTACTTTGATCCCGATGTAATTTTCGTCCTGT
TATCAATCTATAGTAGATGACTTAATAGTTCCTTCTATTTCCTGATCTGACTTGAGAAGTGTAATTCAACTTAGAATTAACATTTGTTTGTTACATGAAATTATGTATTA
TAAAGTTCAACTTTTCTTTGTCAACACAG
Protein sequenceShow/hide protein sequence
MVCEKFVDVGEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV