; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G22710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G22710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box domain-containing protein
Genome locationClcChr01:33749942..33757645
RNA-Seq ExpressionClc01G22710
SyntenyClc01G22710
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR011043 - Galactose oxidase/kelch, beta-propeller
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13067.1 putative F-box protein [Cucumis melo var. makuwa]3.8e-13972.83Show/hide
Query:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF-
        MEKKWK EI  + N+E   D I +VILSKV  FNL SCRLV K+WNNL+L CKFDP + IS    AYDCPSR L CV+FDP Y EGM+S   FSFHPKF 
Subjt:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF-

Query:  -SSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE
         SSSSISIIN+CNGLLSLLI KR+P S +SYVL ILN MTNEYFKFPAEK K+ CCCGRLYSYGLGF+PK  QYKIARTSF  DES T VEIFAFG+T +
Subjt:  -SSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE

Query:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA
         WT VG LPSLV+EDHGVYFNGGLYW+ ++  P DS+ + IYRLDIENE LEKISCPQ+ GG+FFFGVFD TLYLT+   + + KYQVWKM++NFSWIKA
Subjt:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA

Query:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
        FV+S P+NL HP+HPHQPWGVSQL PIKACEDGKILCLLAGLHLIL
Subjt:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

XP_004134745.1 F-box protein At3g07870 [Cucumis sativus]5.3e-14173.12Show/hide
Query:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFS
        MEKKWK EI  + N+E   D I +VILSKV  FNL SCRLV K+WNNLIL CKFDP + +S   FAYDCPSR L CV+FDP Y EGM+S   F+FHPKFS
Subjt:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFS

Query:  S--SSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE
        +  SSISIIN+CNGLLSLLI KR+  S +SYVL ILN MTNEYFKFPAEK K+ CCCGRLYSYGLGF+PKT QYKIARTSF  DES T VEIF FG+T +
Subjt:  S--SSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE

Query:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA
         WTPVG LPSLV+EDHGVYF GGLYW+ ++  P DS+ +AIYRLD+ENEKLEKISCPQY GG+FFFGVFD TLYLT+   + + KYQVWKM++NFSWIKA
Subjt:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA

Query:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
        FV+SRP+NL HP+HPHQPWGVSQL PIKACEDGKILCLLAGLHLIL
Subjt:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

XP_008439950.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]1.9e-13872.54Show/hide
Query:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF-
        MEKKWK EI  + N+E   D I +VILSKV  FNL SCRLV K+WNNL+L CKFDP + IS    AYDCPSR L CV+FDP Y EGM+S   FSFHPKF 
Subjt:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF-

Query:  -SSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE
         SSSSISIIN+CNGLLSLLI KR+P S +SYVL ILN MTNEYFKFPAEK K+ CCCGRLYSYGLGF+PK  QYKIARTSF  DES T VEIFAFG+  +
Subjt:  -SSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE

Query:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA
         WT VG LPSLV+EDHGVYFNGGLYW+ ++  P DS+ + IYRLDIENE LEKISCPQ+ GG+FFFGVFD TLYLT+   + + KYQVWKM++NFSWIKA
Subjt:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA

Query:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
        FV+S P+NL HP+HPHQPWGVSQL PIKACEDGKILCLLAGLHLIL
Subjt:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]1.3e-9957.18Show/hide
Query:  MEKKWKSEISNMNAELTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFA--YDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFS
        MEKK KS+I   N+EL  DI ++I SK+ FFNLP+CRLVS  WNNL+L+CKFDP I ISNL FA  Y C  RNL CV+ DP++LEGMS+   F+FHP  S
Subjt:  MEKKWKSEISNMNAELTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFA--YDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFS

Query:  SSS--ISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE
        S S  ISIINSC+GL+SLLI KRR       V+ +LN MTNEYFK P  + K      + Y YGLGFSP+T QYK+ART ++  E    VEIFAFGT+ E
Subjt:  SSS--ISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE

Query:  WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDS-TNAIYRLDIENEKLEKISCPQYG---GGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWI
        WTPVG +P  + E HGVYFNGGLYW+G +  P    ++ IYRLD+E++K ++IS P  G   G + + GV++DTLYLT+C G  D +Y VWKMEE+FSWI
Subjt:  WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDS-TNAIYRLDIENEKLEKISCPQYG---GGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWI

Query:  KAFVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
        K FVL+ P+N+ H    H P G   LQ IKACEDG ILCL AGL+LIL
Subjt:  KAFVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

XP_038883771.1 putative F-box protein At1g60370 [Benincasa hispida]6.9e-15781.29Show/hide
Query:  MEKKWKSEI-SNMNAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFS
        MEKK  SEI  + ++EL  D I +VILSKV  FNLPSCRLV KAWNNL+L CKFDPP+LIS+L  AYDCPSRNL C++F+ KYLEGMSS V F+FHPKF 
Subjt:  MEKKWKSEI-SNMNAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFS

Query:  SSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTREWT
        +SSISIINSCNGLLSLLI KR+  SPISYVL ILN MTNEYFKFPAEK KT CCCGR YSYGLGFSP+T QYKIARTSFL+DES T VEIFAFGTTREWT
Subjt:  SSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTREWT

Query:  PVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDSTNAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKAFVLS
        PVGVLPSLV+EDHGVYFNGGLYW  DELQPRDS NAIYRLDIENEKLEKISCP YGGG+FFFGVFD TLYLT  TGTVD  YQVWKMEEN SWIKAFVLS
Subjt:  PVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDSTNAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKAFVLS

Query:  RPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
        RP+NLRHPEH  QPWGVSQLQPIK CEDGKILCLLAG  LIL
Subjt:  RPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

TrEMBL top hitse value%identityAlignment
A0A0A0KJY9 F-box domain-containing protein2.6e-14173.12Show/hide
Query:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFS
        MEKKWK EI  + N+E   D I +VILSKV  FNL SCRLV K+WNNLIL CKFDP + +S   FAYDCPSR L CV+FDP Y EGM+S   F+FHPKFS
Subjt:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFS

Query:  S--SSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE
        +  SSISIIN+CNGLLSLLI KR+  S +SYVL ILN MTNEYFKFPAEK K+ CCCGRLYSYGLGF+PKT QYKIARTSF  DES T VEIF FG+T +
Subjt:  S--SSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE

Query:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA
         WTPVG LPSLV+EDHGVYF GGLYW+ ++  P DS+ +AIYRLD+ENEKLEKISCPQY GG+FFFGVFD TLYLT+   + + KYQVWKM++NFSWIKA
Subjt:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA

Query:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
        FV+SRP+NL HP+HPHQPWGVSQL PIKACEDGKILCLLAGLHLIL
Subjt:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

A0A1S3B0Q6 putative F-box protein At3g211209.2e-13972.54Show/hide
Query:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF-
        MEKKWK EI  + N+E   D I +VILSKV  FNL SCRLV K+WNNL+L CKFDP + IS    AYDCPSR L CV+FDP Y EGM+S   FSFHPKF 
Subjt:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF-

Query:  -SSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE
         SSSSISIIN+CNGLLSLLI KR+P S +SYVL ILN MTNEYFKFPAEK K+ CCCGRLYSYGLGF+PK  QYKIARTSF  DES T VEIFAFG+  +
Subjt:  -SSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE

Query:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA
         WT VG LPSLV+EDHGVYFNGGLYW+ ++  P DS+ + IYRLDIENE LEKISCPQ+ GG+FFFGVFD TLYLT+   + + KYQVWKM++NFSWIKA
Subjt:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA

Query:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
        FV+S P+NL HP+HPHQPWGVSQL PIKACEDGKILCLLAGLHLIL
Subjt:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

A0A1S3BQV8 putative F-box protein At3g211202.2e-9253.89Show/hide
Query:  KKWKSEISNMNAELTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFA--YDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF--S
        +K K+ I N + EL  DI + I SK+ FFNLP+CRLVS+ WNNLI +CKFDP   I +L FA  Y    RNL CVEFDP+++EGMS    F+FHP F  +
Subjt:  KKWKSEISNMNAELTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFA--YDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF--S

Query:  SSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTREWT
        SS I+IINSC+GL+SLLI KRR       V+ +LN +TNEYFK P  +LK        Y YGLGFSPKTNQYK+ART F  +E    V+IFAFGT+ EWT
Subjt:  SSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTREWT

Query:  PVGVLPSLVIEDHGVYFNGGLYWIGDELQ-----PRDSTNAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIK
        P+G +P+ + E HGVYFNGGLYW+G + Q       D T  +YRLD+ +EK +KIS P +GG   + GV++ TLYLT+C    D  Y VWKM+E+FSW K
Subjt:  PVGVLPSLVIEDHGVYFNGGLYWIGDELQ-----PRDSTNAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIK

Query:  AFVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
         FVL+ P+N+ H  H H P G   LQ +K CEDG ILCL AG+ LI+
Subjt:  AFVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

A0A5D3CIX9 Putative F-box protein2.2e-9253.89Show/hide
Query:  KKWKSEISNMNAELTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFA--YDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF--S
        +K K+ I N + EL  DI + I SK+ FFNLP+CRLVS+ WNNLI +CKFDP   I +L FA  Y    RNL CVEFDP+++EGMS    F+FHP F  +
Subjt:  KKWKSEISNMNAELTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFA--YDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF--S

Query:  SSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTREWT
        SS I+IINSC+GL+SLLI KRR       V+ +LN +TNEYFK P  +LK        Y YGLGFSPKTNQYK+ART F  +E    V+IFAFGT+ EWT
Subjt:  SSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTREWT

Query:  PVGVLPSLVIEDHGVYFNGGLYWIGDELQ-----PRDSTNAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIK
        P+G +P+ + E HGVYFNGGLYW+G + Q       D T  +YRLD+ +EK +KIS P +GG   + GV++ TLYLT+C    D  Y VWKM+E+FSW K
Subjt:  PVGVLPSLVIEDHGVYFNGGLYWIGDELQ-----PRDSTNAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIK

Query:  AFVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
         FVL+ P+N+ H  H H P G   LQ +K CEDG ILCL AG+ LI+
Subjt:  AFVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

A0A5D3CM94 Putative F-box protein1.9e-13972.83Show/hide
Query:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF-
        MEKKWK EI  + N+E   D I +VILSKV  FNL SCRLV K+WNNL+L CKFDP + IS    AYDCPSR L CV+FDP Y EGM+S   FSFHPKF 
Subjt:  MEKKWKSEISNM-NAELTAD-ITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKF-

Query:  -SSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE
         SSSSISIIN+CNGLLSLLI KR+P S +SYVL ILN MTNEYFKFPAEK K+ CCCGRLYSYGLGF+PK  QYKIARTSF  DES T VEIFAFG+T +
Subjt:  -SSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE

Query:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA
         WT VG LPSLV+EDHGVYFNGGLYW+ ++  P DS+ + IYRLDIENE LEKISCPQ+ GG+FFFGVFD TLYLT+   + + KYQVWKM++NFSWIKA
Subjt:  -WTPVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDST-NAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKA

Query:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL
        FV+S P+NL HP+HPHQPWGVSQL PIKACEDGKILCLLAGLHLIL
Subjt:  FVLSRPKNLRHPEHPHQPWGVSQLQPIKACEDGKILCLLAGLHLIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G46984.1 F-box family protein2.9e-0423.9Show/hide
Query:  LTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISN-----LLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFSSS----SISIIN
        L  D+   ILS++   ++  CRLVSK W +++ +  F    LI +     LLF     S+        P+  +     V   +H  FS +    S  ++N
Subjt:  LTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISN-----LLFAYDCPSRNLCCVEFDPKYLEGMSSFVQFSFHPKFSSS----SISIIN

Query:  SCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE--WTPVGV-L
            L + L LK +    I  V  I N  T +    P   +K         S+  G+ P   Q+K+     L   S+   ++   GT R+  W  +    
Subjt:  SCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTRE--WTPVGV-L

Query:  PSLV-IEDHGVYFNGGLYWIGDELQPRDSTNAIYRLDIENEKLEKISCPQY
        P     + +G+  NG LY+       R++   I R D+ +E+   +    Y
Subjt:  PSLV-IEDHGVYFNGGLYWIGDELQPRDSTNAIYRLDIENEKLEKISCPQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTAGAGAATGCCCAATTCGGTTCTATATATATCCAAAACCGAAATTTCACTGGTCGACGATGGAGAAGAAGTGGAAAAGTGAGATTAGTAACATGAATGCGGA
GCTTACAGCTGATATCACTCGGGTAATACTTTCGAAAGTCCTCTTCTTCAATTTGCCCAGTTGCAGGCTCGTGTCTAAAGCATGGAACAATCTGATTTTAAATTGTAAGT
TTGATCCTCCAATCTTAATTTCCAACCTCTTGTTTGCCTATGATTGTCCCTCTCGCAATCTCTGTTGTGTGGAATTCGATCCTAAATATTTGGAAGGAATGAGTAGTTTT
GTCCAATTTAGCTTCCATCCTAAATTTTCCTCCAGTTCCATCTCCATTATCAATTCCTGCAATGGACTCCTTTCTCTTCTTATCTTGAAAAGAAGACCAGAATCACCTAT
ATCTTATGTTCTTTACATATTAAATTCCATGACAAATGAGTACTTCAAATTTCCCGCTGAGAAATTGAAAACACGTTGTTGTTGTGGTAGACTCTATAGCTACGGATTAG
GATTCAGTCCAAAAACAAATCAGTACAAAATAGCAAGAACTTCCTTTCTACAGGATGAATCCGCTACCTTTGTAGAGATTTTTGCATTTGGCACTACTCGCGAATGGACC
CCTGTTGGGGTTTTGCCTTCTCTTGTCATTGAAGACCATGGGGTTTATTTCAATGGAGGCCTCTACTGGATTGGAGACGAGCTGCAACCACGCGATTCTACTAACGCCAT
TTACCGTTTGGATATAGAAAACGAGAAACTGGAGAAAATTTCATGTCCCCAATATGGTGGTGGTTATTTTTTCTTTGGAGTTTTTGATGACACCCTCTATCTAACTATCT
GCACCGGCACCGTGGATAAAAAGTACCAGGTGTGGAAGATGGAAGAAAATTTTTCATGGATTAAAGCATTTGTTTTATCTAGACCAAAAAATTTGCGTCATCCTGAGCAT
CCTCACCAACCTTGGGGAGTATCTCAGCTCCAACCCATCAAAGCTTGTGAAGATGGGAAGATATTGTGTCTTCTTGCTGGACTCCATTTAATACTTATTCTTGTAGGACC
TGATAGTAGGCTAACTCGTTCCATTGTGGTTTGCATGTGTATATGCATCAGAAAATATAGAAGCAAATGTTATGTGAATCTTATGTATACTCTTTCCATTGTGCTTTCCT
CTGCTCAACTACTTCCATTTTGTTGTTGGAGTGTGATTCACAGGTCTAAGAAGAAAGACAATGCCGGTAGCATATGTATATATGTTGTGTCTCCTTGTTCGAGCTTTGAA
TATGCAATGCTGAAGGCATGTTGGGATCCTAAGCAAGAGACAAGTGAAATACGTAACATTGATTGGATAAACAAGCACGTTTGCAAGCAGGAGGCTCAACATGCTTCTGT
AAGGCTGCTGGTCGTTCCAACTGGAAGTGTAGGAACGAGGACATTTTTGACGAGCTGTTATTTGAGATATGAGACTAATGATCTTTTCTACAACTTGCCGCCGCCGCTGC
CTCCTCTGCCACCAACATCAGACAATAATGGGAAGAATAATACTAAAACTATTATAGTCGTCGTGGTGTCCATCTTATCAGCCATCATTCTCGTTGTTGCCATTTTCATC
ATTTTCAGGTTGGAAGAGAGAGCACAAAAGACCGTTAGTAAAATCTGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGTAGAGAATGCCCAATTCGGTTCTATATATATCCAAAACCGAAATTTCACTGGTCGACGATGGAGAAGAAGTGGAAAAGTGAGATTAGTAACATGAATGCGGA
GCTTACAGCTGATATCACTCGGGTAATACTTTCGAAAGTCCTCTTCTTCAATTTGCCCAGTTGCAGGCTCGTGTCTAAAGCATGGAACAATCTGATTTTAAATTGTAAGT
TTGATCCTCCAATCTTAATTTCCAACCTCTTGTTTGCCTATGATTGTCCCTCTCGCAATCTCTGTTGTGTGGAATTCGATCCTAAATATTTGGAAGGAATGAGTAGTTTT
GTCCAATTTAGCTTCCATCCTAAATTTTCCTCCAGTTCCATCTCCATTATCAATTCCTGCAATGGACTCCTTTCTCTTCTTATCTTGAAAAGAAGACCAGAATCACCTAT
ATCTTATGTTCTTTACATATTAAATTCCATGACAAATGAGTACTTCAAATTTCCCGCTGAGAAATTGAAAACACGTTGTTGTTGTGGTAGACTCTATAGCTACGGATTAG
GATTCAGTCCAAAAACAAATCAGTACAAAATAGCAAGAACTTCCTTTCTACAGGATGAATCCGCTACCTTTGTAGAGATTTTTGCATTTGGCACTACTCGCGAATGGACC
CCTGTTGGGGTTTTGCCTTCTCTTGTCATTGAAGACCATGGGGTTTATTTCAATGGAGGCCTCTACTGGATTGGAGACGAGCTGCAACCACGCGATTCTACTAACGCCAT
TTACCGTTTGGATATAGAAAACGAGAAACTGGAGAAAATTTCATGTCCCCAATATGGTGGTGGTTATTTTTTCTTTGGAGTTTTTGATGACACCCTCTATCTAACTATCT
GCACCGGCACCGTGGATAAAAAGTACCAGGTGTGGAAGATGGAAGAAAATTTTTCATGGATTAAAGCATTTGTTTTATCTAGACCAAAAAATTTGCGTCATCCTGAGCAT
CCTCACCAACCTTGGGGAGTATCTCAGCTCCAACCCATCAAAGCTTGTGAAGATGGGAAGATATTGTGTCTTCTTGCTGGACTCCATTTAATACTTATTCTTGTAGGACC
TGATAGTAGGCTAACTCGTTCCATTGTGGTTTGCATGTGTATATGCATCAGAAAATATAGAAGCAAATGTTATGTGAATCTTATGTATACTCTTTCCATTGTGCTTTCCT
CTGCTCAACTACTTCCATTTTGTTGTTGGAGTGTGATTCACAGGTCTAAGAAGAAAGACAATGCCGGTAGCATATGTATATATGTTGTGTCTCCTTGTTCGAGCTTTGAA
TATGCAATGCTGAAGGCATGTTGGGATCCTAAGCAAGAGACAAGTGAAATACGTAACATTGATTGGATAAACAAGCACGTTTGCAAGCAGGAGGCTCAACATGCTTCTGT
AAGGCTGCTGGTCGTTCCAACTGGAAGTGTAGGAACGAGGACATTTTTGACGAGCTGTTATTTGAGATATGAGACTAATGATCTTTTCTACAACTTGCCGCCGCCGCTGC
CTCCTCTGCCACCAACATCAGACAATAATGGGAAGAATAATACTAAAACTATTATAGTCGTCGTGGTGTCCATCTTATCAGCCATCATTCTCGTTGTTGCCATTTTCATC
ATTTTCAGGTTGGAAGAGAGAGCACAAAAGACCGTTAGTAAAATCTGGAGGTGA
Protein sequenceShow/hide protein sequence
MVCRECPIRFYIYPKPKFHWSTMEKKWKSEISNMNAELTADITRVILSKVLFFNLPSCRLVSKAWNNLILNCKFDPPILISNLLFAYDCPSRNLCCVEFDPKYLEGMSSF
VQFSFHPKFSSSSISIINSCNGLLSLLILKRRPESPISYVLYILNSMTNEYFKFPAEKLKTRCCCGRLYSYGLGFSPKTNQYKIARTSFLQDESATFVEIFAFGTTREWT
PVGVLPSLVIEDHGVYFNGGLYWIGDELQPRDSTNAIYRLDIENEKLEKISCPQYGGGYFFFGVFDDTLYLTICTGTVDKKYQVWKMEENFSWIKAFVLSRPKNLRHPEH
PHQPWGVSQLQPIKACEDGKILCLLAGLHLILILVGPDSRLTRSIVVCMCICIRKYRSKCYVNLMYTLSIVLSSAQLLPFCCWSVIHRSKKKDNAGSICIYVVSPCSSFE
YAMLKACWDPKQETSEIRNIDWINKHVCKQEAQHASVRLLVVPTGSVGTRTFLTSCYLRYETNDLFYNLPPPLPPLPPTSDNNGKNNTKTIIVVVVSILSAIILVVAIFI
IFRLEERAQKTVSKIWR