; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G23370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G23370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:34169276..34171416
RNA-Seq ExpressionClc01G23370
SyntenyClc01G23370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052708.1 hypothetical protein E6C27_scaffold120G003210 [Cucumis melo var. makuwa]2.1e-0457.14Show/hide
Query:  GQRAYRDISVSNIVAAKVPKEGDYVQR-----QNGETRFILGSD-PPNKGFVDDVQ
        GQRAYRDIS+SNIVAAKV KEGDYVQR     Q+ ++  IL +D  P  G V+ ++
Subjt:  GQRAYRDISVSNIVAAKVPKEGDYVQR-----QNGETRFILGSD-PPNKGFVDDVQ
KGN49203.1 hypothetical protein Csa_002915 [Cucumis sativus]3.7e-0985.37Show/hide
Query:  KRWRERGRANNNCSGQRAYRDISVSNIVAAKVPKEGDYVQR
        +R R+RGRAN+NCSGQRAYRDIS+SNIVAAKV KEGDYVQR
Subjt:  KRWRERGRANNNCSGQRAYRDISVSNIVAAKVPKEGDYVQR
TrEMBL top hitse value%identityAlignment
A0A0A0KI11 Uncharacterized protein1.8e-0985.37Show/hide
Query:  KRWRERGRANNNCSGQRAYRDISVSNIVAAKVPKEGDYVQR
        +R R+RGRAN+NCSGQRAYRDIS+SNIVAAKV KEGDYVQR
Subjt:  KRWRERGRANNNCSGQRAYRDISVSNIVAAKVPKEGDYVQR
A0A5D3CRT7 Uncharacterized protein1.0e-0457.14Show/hide
Query:  GQRAYRDISVSNIVAAKVPKEGDYVQR-----QNGETRFILGSD-PPNKGFVDDVQ
        GQRAYRDIS+SNIVAAKV KEGDYVQR     Q+ ++  IL +D  P  G V+ ++
Subjt:  GQRAYRDISVSNIVAAKVPKEGDYVQR-----QNGETRFILGSD-PPNKGFVDDVQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGCCTTTTCTCCTTGGAGTCATGTTGGAATGCTCACATTCCATCAACTACAGCGATAAAGACAGAGAACGAGAAGGAGAGGAGAGAGAGAAAGAGATGGAGAGA
GAGGGGGAGAGCTAATAACAATTGCAGTGGGCAGAGAGCCTACAGAGACATATCAGTATCGAATATTGTTGCGGCAAAAGTACCGAAGGAAGGTGACTATGTTCAACGGC
AAAATGGAGAAACTCGATTCATCTTGGGGTCTGATCCTCCCAATAAAGGCTTTGTTGATGATGTTCAGATTGGGGTAAAACAGATGGTAGAGGGTGGAGATTTTAAGATC
AGACCTCAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGGCCTTTTCTCCTTGGAGTCATGTTGGAATGCTCACATTCCATCAACTACAGCGATAAAGACAGAGAACGAGAAGGAGAGGAGAGAGAGAAAGAGATGGAGAGA
GAGGGGGAGAGCTAATAACAATTGCAGTGGGCAGAGAGCCTACAGAGACATATCAGTATCGAATATTGTTGCGGCAAAAGTACCGAAGGAAGGTGACTATGTTCAACGGC
AAAATGGAGAAACTCGATTCATCTTGGGGTCTGATCCTCCCAATAAAGGCTTTGTTGATGATGTTCAGATTGGGGTAAAACAGATGGTAGAGGGTGGAGATTTTAAGATC
AGACCTCAGTGGTAG
Protein sequenceShow/hide protein sequence
MIGLFSLESCWNAHIPSTTAIKTENEKERRERKRWRERGRANNNCSGQRAYRDISVSNIVAAKVPKEGDYVQRQNGETRFILGSDPPNKGFVDDVQIGVKQMVEGGDFKI
RPQW