; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G23530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G23530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationClcChr01:34279336..34287477
RNA-Seq ExpressionClc01G23530
SyntenyClc01G23530
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]2.5e-25097.56Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLIHGEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]1.1e-25097.56Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSA SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLIHGEVLAREPMPSNITVRLPSLE+LEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]3.8e-25197.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLIHGEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]2.5e-25097.56Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLIHGEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida]1.6e-25298.45Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLP MKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPMFQANLQKLLIHGEVLAREPMP+NITVRLPSLEEL+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLT+EQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWED KNMRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 25.4e-25197.56Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSA SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLIHGEVLAREPMPSNITVRLPSLE+LEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 29.0e-23892.79Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------
        RLNP FQANLQKLLIHGEVLAREPMPSNITVRLPSLE+LEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ                   
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------

Query:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF
              RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWF
Subjt:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF

Query:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSV
        IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSV
Subjt:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSV

Query:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL
        PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RL
Subjt:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 23.8e-24489.21Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+A SMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLI+GEVLAREPMPSNITVRLPSLE+LEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD

Query:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFL
        LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFL
Subjt:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKAD+HTHMREHLRRQK
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 26.6e-24997.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLI GEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 21.9e-25197.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLIHGEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 47.7e-6934Show/hide
Query:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPMFQA
        +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             LNP+F+ 
Subjt:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPMFQA

Query:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGFVVVETN
        Y + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF+VVETN
Subjt:  YIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGFVVVETN

Query:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
        +R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    Y++F
Subjt:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF

Query:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
         S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

P60027 General transcription factor IIH subunit 42.6e-6933.77Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL

Query:  NPMFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP+F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPMFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Q54C29 General transcription factor IIH subunit 44.4e-6431.39Show/hide
Query:  VASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDA-PVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFI------------------------
        +ASL +  L++LY++ + C+AILRSLPP +K+++L+ML +D  P+S    ++W     + ++K ++ +L  L++                          
Subjt:  VASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDA-PVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFI------------------------

Query:  ---ETADRKRETTYRLNPMFQANLQKLLIH-GEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE
           +   ++ E T RLNP+FQ N+++ L+   +V+           + PS+++L++Y+  QWE  L  L  S    +PS + S ++       L++++ +
Subjt:  ---ETADRKRETTYRLNPMFQANLQKLLIH-GEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE

Query:  APRLTESGFQFLLMETNAQLWYIIREYISNAEER----GVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS--WFIPTK
           +T  GF+FLL +   Q+W ++  Y+ + E++         DL+SFL  LSF   G  Y +  L+E+Q+  +  L   GL+ +   R DS   F PT+
Subjt:  APRLTESGFQFLLMETNAQLWYIIREYISNAEER----GVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS--WFIPTK

Query:  ----LATNLSMSLADSSS-------RKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRV
            L T  ++SL  S S       ++QG++V+ETN+R+YAY+SS L   +L LF ++ Y+LPNL VG IT+ES+  A  +GITADQI+ F++ N+HP  
Subjt:  ----LATNLSMSLADSSS-------RKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR
        A     +P+ V +QI LWE++ NR+  T +  Y+ FP+ + + A   +A+E +  +W       LVVK + +  +R  +++
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR

Q680U9 General transcription and DNA repair factor IIH subunit TFB21.0e-20979.33Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV AT MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNP FQ NLQK +I G VL REPM S+  ++LPSL+ELE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+DQI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

Q92759 General transcription factor IIH subunit 42.6e-6933.77Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL

Query:  NPMFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP+F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPMFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related7.1e-21179.33Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV AT MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNP FQ NLQK +I G VL REPM S+  ++LPSL+ELE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+DQI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.2 transcription factor-related7.1e-21179.33Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV AT MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNP FQ NLQK +I G VL REPM S+  ++LPSL+ELE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+DQI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.3 transcription factor-related7.1e-21179.33Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV AT MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNP FQ NLQK +I G VL REPM S+  ++LPSL+ELE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+DQI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCACCGCTGGCTAAGAAGTTTGTTTTACAAATGCTATACATTGATGCTCCAGTTTCAGCCACGTCCATGGAGGAGTGGGTTCTCCCAGATGGAGTCTCAA
AGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGACAGGAAAAGAGAAACAACCTACAGGCTAAATCCTATGTTCCAAGCAAACCTC
CAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAGAGAACCAATGCCTTCAAATATAACCGTGAGGCTTCCGAGTTTGGAAGAACTTGAGGCTTATGCTCTGGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAACCATCAAACATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTTCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGGGAATATATATCTAACGCTGAGGAGCGAGGT
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATTGATACACTGACAGAAGAACAGAGGTATGCTATCAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCCACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAA
GGAAACAGGGATTTGTTGTCGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTGCGTCTTTTTTCGAGGATTGAGTATCAACTT
CCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACCGCAGATCAGATAGTTACTTTTCTACAGCAGAATGCACATCCTCG
TGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCACATTTTTACGACGAAT
TTCCTTCCAGGGAAGTTTTTGAGGCTGCGTGCGACTACGCACGAGAATGGAATGGCTTGCTATGGGAGGATTCGAAGAACATGCGACTGGTAGTGAAGGCAGACATACAC
ACACATATGCGGGAACATCTTCGGCGTCAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAAATGTGTGTGTGGAAAGCCCAATAGCTTATAATAAATTGAAAGAAGAATTTGACATTGAACGACTTGTCGTTCTTCATCCTCTCCTCGGTCCGACTTGAGGTCG
TCGGAGCAAGCAGAGGGTCAATTGATTGATTTCAGAGGATCCCAATACTTCACCATTGGCTATAAATGCTCACTGCAGCCTCACTCACGACCTGGAAGCTGCAGTTCTTT
GTAATTCGTGATTCTGTGTATCCAACGCTTCAAGAATTCTCCTTTGCTTGCTCAAAGGACTACCTACAGAAAGAAGGAAAGCTAATCCAAAATGCCTCAAGTAAAGATCA
TAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCTCAGGTCACTTCCACCGCTG
GCTAAGAAGTTTGTTTTACAAATGCTATACATTGATGCTCCAGTTTCAGCCACGTCCATGGAGGAGTGGGTTCTCCCAGATGGAGTCTCAAAGTATAAGGTTGCTGTTGA
TCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGACAGGAAAAGAGAAACAACCTACAGGCTAAATCCTATGTTCCAAGCAAACCTCCAAAAGCTTTTAATACATG
GTGAAGTTCTAGCCAGAGAACCAATGCCTTCAAATATAACCGTGAGGCTTCCGAGTTTGGAAGAACTTGAGGCTTATGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAA
TTGATAAACTCGGGCCAAGCAGAGAAACCATCAAACATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATAAAGAAGCTCCACGATTAAC
TGAGAGTGGTTTTCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGGGAATATATATCTAACGCTGAGGAGCGAGGTGTGGATCCTGCAGATTTGA
TTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATTGATACACTGACAGAAGAACAGAGGTATGCTATCAAGGACCTTGCTGATCTGGGACTA
GTTAAGCTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCCACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAAGGAAACAGGGATTTGTTGT
CGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTGCGTCTTTTTTCGAGGATTGAGTATCAACTTCCAAATCTTATAGTTGGAG
CAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACCGCAGATCAGATAGTTACTTTTCTACAGCAGAATGCACATCCTCGTGTTGCAGAGAGAATACCA
TCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCACATTTTTACGACGAATTTCCTTCCAGGGAAGTTTT
TGAGGCTGCGTGCGACTACGCACGAGAATGGAATGGCTTGCTATGGGAGGATTCGAAGAACATGCGACTGGTAGTGAAGGCAGACATACACACACATATGCGGGAACATC
TTCGGCGTCAAAAGTAGATTGTGAAGAGATGATACAATATGGGTGCCAAGATCTGTTTATAACCATGGCCTCTGGTACTCAGTTTTTGTTGCTTCAATGGCATGGCCTAA
AAGATTACTTCGTTAATGAGAAGGGTGAAGAACGCAGTGAGAGGTTTTTTGCGGGACTGGGAGGAAAGAATATTGTGCCAATAACAATGGTTTTGTTACTGTGTACATTT
CAAAGTCAGTTCCCCTTCTTCATAGATTATACGATATGGAAGTTTTGTTAGGTTGATTTCCTTTTGTGGATCAACTTCTGACTACAACGCTGTGGTTCAAATGGTATACG
GAGTCTAAAGAAAGAAAAACTTCTGGATACAACTTCATTTGGGCACTTGTTTACATCTGGGACTTACCTGTTGATGTTAGCC
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPMFQANL
QKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERG
VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQL
PNLIVGAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIH
THMREHLRRQK