CuGenDBv2

Gene ID	Clc01G23815
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Glycogen phosphorylase 1-like
Genome location	ClcChr01:34515042..34515506
RNA-Seq Expression	Clc01G23815
Synteny	Clc01G23815
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052667.1 uncharacterized protein E6C27_scaffold120G002770 [Cucumis melo var. makuwa]

1.2e-79

92.21

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PW QKLQALTHILLCP TAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQWDDEQR NY RMRL+RKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

KAG6594585.1 hypothetical protein SDJN03_11138, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-77

89.61

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE+PWPQKLQ LTHILLCPTTAPPLASQYF+ATKIPCYLNWDYPPLLCPK SIFPFLSLHLQWGFSLFLKRLSRF LPKTSWRSKCP+Q PPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQW DEQR  YVRMRL+RKRLGSDVHPLIPI+IPNMLLFSLLLWNP SS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

XP_004134687.2 uncharacterized protein LOC101221431 [Cucumis sativus]

9.9e-82

94.16

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEEAPWPQKLQALTHILLCPTTAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQWDDEQR NY RMRL+RKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

XP_008439813.1 PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo]

1.2e-79

92.21

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PW QKLQALTHILLCP TAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQWDDEQR NY RMRL+RKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

XP_038883097.1 uncharacterized protein LOC120074151 [Benincasa hispida]

1.1e-80

94.16

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PWPQKLQALTHILLCPTTAPPLASQY IATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V +AQW DEQR NYVRMRL+RKRL SDVHPLIPIMIPNMLLFSLLLWNPFSS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KK88 Uncharacterized protein

4.8e-82

94.16

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEEAPWPQKLQALTHILLCPTTAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQWDDEQR NY RMRL+RKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

A0A1S3B097 uncharacterized protein LOC103484499

5.8e-80

92.21

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PW QKLQALTHILLCP TAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQWDDEQR NY RMRL+RKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

A0A5A7UDV0 Uncharacterized protein

5.8e-80

92.21

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PW QKLQALTHILLCP TAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQWDDEQR NY RMRL+RKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

A0A6J1EGM1 uncharacterized protein LOC111433914

7.9e-77

88.96

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE+PWPQKLQ LTHILLCPTTAPPLASQYF+ATKIPCYLNWDYPPLLCPK SIFPF SLHLQWGFSLFLKRLSRF LPKTSWRSKCP+Q PPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQW DEQR  YVRMRL+RKRLGSDVHPLIPI+IPNMLLFSLLLWNP SS D
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

A0A6J1IR68 uncharacterized protein LOC111478635

4.8e-74

87.5

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        ME+APW QKL+ALTHILLCPTTAPPLASQ+FIATKIPCYLNWDYPPLLC K SIFPF SLHLQWGFSLFLKRLSR GLP TSWRSKCPYQLPPPL+LA+G
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSS
        V  AQWDDEQR NYVRMRL+RKRLGSDV+PLIPIMIPNMLLF LLLW P SS
Subjt:  VPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G33855.1 unknown protein

1.4e-41

53.33

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Query:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHL-QWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAK
        MEE  W Q++QA+THIL  PTT P L SQ+FI   IP Y++WDYPP+  P          HL QW  S F KR+SRFGLP TSWRS  PY  PP  ++A 
Subjt:  MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHL-QWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAK

Query:  GVPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNP
        GV   +W  E+R  Y R RL+RKRL ++V+P IP+++PN+LLF+LLLW+P
Subjt:  GVPAAQWDDEQRTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNP

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGAAGCACCATGGCCTCAAAAGCTTCAAGCCCTAACCCACATTCTACTCTGCCCCACCACCGCTCCGCCGCTCGCTTCTCAATACTTCATCGCCACCAAAATCCC
CTGTTACCTCAATTGGGACTACCCCCCTCTCCTCTGCCCTAAATCTTCCATTTTCCCCTTTCTCTCTCTTCACCTCCAATGGGGTTTTTCTCTCTTCCTCAAAAGACTCT
CCCGATTCGGCCTCCCCAAAACCTCCTGGCGATCCAAATGCCCTTATCAACTCCCTCCGCCTTTGATTCTCGCTAAAGGCGTCCCCGCTGCTCAATGGGACGACGAACAG
AGGACAAACTACGTCAGAATGAGGCTCAAAAGAAAGCGTCTCGGCAGCGATGTTCATCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTCTCTTCTCCTATG
GAATCCATTTTCTTCCGACGATTGA

mRNA sequence

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Protein sequence

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MEEAPWPQKLQALTHILLCPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKGVPAAQWDDEQ
RTNYVRMRLKRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

Clc01G23815 (gene) of Watermelon (cordophanus) v2 genome