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Clc01G23910 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G23910
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutaredoxin
Genome locationClcChr01:34574040..34574891
RNA-Seq ExpressionClc01G23910
SyntenyClc01G23910
Gene Ontology termsGO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR011905 - Glutaredoxin-like, plant II
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001274395.1 glutaredoxin [Cucumis sativus]1.2e-5486.36Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV
        MHQAIPYRTWIPAAA SSSCKA E SGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAV+ VGE+DEVD  G+    A  G DG VQFPVVF+
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV

Query:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL
        GGKMFGGLEKVMAAHISGELVPALKDAGALWL
Subjt:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL

XP_008439802.2 PREDICTED: glutaredoxin-C9 [Cucumis melo]4.1e-5284.09Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV
        MHQAIPYRTWIPAAASSS  KA E SGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG NPAV+ VGE+DEVD  G+    A    DG VQFPVVF+
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV

Query:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL
        GGKMFGGLEKVMAAHISGELVPALKDAGALWL
Subjt:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL

XP_022978780.1 glutaredoxin-C9-like [Cucurbita maxima]1.2e-5182.01Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDG----VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIV
        MHQAIPYRTW+PAAASS   KA EAS DG    VEKLVSKNAVVVLAR GCCMSHVLKLLLLGHGANPAV AVGE+DEV+I   +GKF  GA DGN+G V
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDG----VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIV

Query:  QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL
        Q PVVFVGGKMFGGLEKVMAAHI+GELVPALKDAGALWL
Subjt:  QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL

XP_023543691.1 glutaredoxin-C9-like [Cucurbita pepo subsp. pepo]5.4e-5282.01Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDG----VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIV
        MHQAIPYRTW+PAAASS   KA EAS DG    VEKLVSKNAVVVLAR GCCMSHVLKLLLLGHGANPAV+AVGE+DEV+I   +GKF  GA DGN+G V
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDG----VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIV

Query:  QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL
        Q PVVFVGGKMFGGLEKVMAAHI+GELVPALKDAGALWL
Subjt:  QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL

XP_038881313.1 glutaredoxin-C9-like [Benincasa hispida]1.3e-5889.63Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIVQFPV
        MHQAIPYRTWIPAAA SSSCKAAE SGDGVEKLVSKNAVVVLA+RGCCMSHVLKLLLLGHG NPAV+AVGE+DEVDI   +GKF+PG  DGNDG VQFPV
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIVQFPV

Query:  VFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL
        VFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL
Subjt:  VFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL

TrEMBL top hitse value%identityAlignment
A0A1S3B087 glutaredoxin-C92.0e-5284.09Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV
        MHQAIPYRTWIPAAASSS  KA E SGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG NPAV+ VGE+DEVD  G+    A    DG VQFPVVF+
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV

Query:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL
        GGKMFGGLEKVMAAHISGELVPALKDAGALWL
Subjt:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL

A0A5D3CMJ3 Glutaredoxin-C92.0e-5284.09Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV
        MHQAIPYRTWIPAAASSS  KA E SGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG NPAV+ VGE+DEVD  G+    A    DG VQFPVVF+
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV

Query:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL
        GGKMFGGLEKVMAAHISGELVPALKDAGALWL
Subjt:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL

A0A6J1EDX5 monothiol glutaredoxin-S9-like1.4e-5080.58Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDG----VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIV
        MHQAIPYRTW+PAAASS   KA EA  DG    V KLVSKNAVVVLAR GCCMSHVLKLLLLGHGANPAV AVGE+DEV+I   +GKF  GA DGN+G V
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDG----VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIV

Query:  QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL
        Q PVVFVGGKMFGGLEKVMAAHI+GELVPALKDAGALWL
Subjt:  QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL

A0A6J1IR73 glutaredoxin-C9-like5.8e-5282.01Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDG----VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIV
        MHQAIPYRTW+PAAASS   KA EAS DG    VEKLVSKNAVVVLAR GCCMSHVLKLLLLGHGANPAV AVGE+DEV+I   +GKF  GA DGN+G V
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDG----VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDI---VGKFAPGARDGNDGIV

Query:  QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL
        Q PVVFVGGKMFGGLEKVMAAHI+GELVPALKDAGALWL
Subjt:  QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL

U3RBI2 Glutaredoxin5.6e-5586.36Show/hide
Query:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV
        MHQAIPYRTWIPAAA SSSCKA E SGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAV+ VGE+DEVD  G+    A  G DG VQFPVVF+
Subjt:  MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFV

Query:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL
        GGKMFGGLEKVMAAHISGELVPALKDAGALWL
Subjt:  GGKMFGGLEKVMAAHISGELVPALKDAGALWL

SwissProt top hitse value%identityAlignment
P0C291 Monothiol glutaredoxin-S94.2e-2348.23Show/hide
Query:  MHQAIPY---RTWIPAAASSSSCKAA------EASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDG
        M+QAIPY   R W PAA+  ++  AA          + V + V++  VVV+ R GCC+SHV+K LL G G NPAV  V    E ++ G  A G      G
Subjt:  MHQAIPY---RTWIPAAASSSSCKAA------EASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDG

Query:  IVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL
         V  P VFVGG++ GGL+++MA HISGELVP LK+AGALWL
Subjt:  IVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL

Q0JDM4 Glutaredoxin-C59.6e-2043.65Show/hide
Query:  RTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDE-VDIVGKFAPGARDGNDGIVQFPVVFVGGKMFG
        + W   AA+     AAE + + VE+L S++AVVV +   CCM H +K L  G G +PAV  +  D    D+    A     G       PVVF+GGK+ G
Subjt:  RTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDE-VDIVGKFAPGARDGNDGIVQFPVVFVGGKMFG

Query:  GLEKVMAAHISGELVPALKDAGALWL
         +++VMAAHI+G LVP LK+AGALWL
Subjt:  GLEKVMAAHISGELVPALKDAGALWL

Q0JP62 Monothiol glutaredoxin-S34.2e-2346.62Show/hide
Query:  ASSSSCKAAEASGD--GVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDG-------------IVQFPVVF
        A S++  AA A+ +   V + V +  VVV+ RRGCCM+HV + LLLG GANPAV+ VG+D +   +   A  AR   DG              V FP VF
Subjt:  ASSSSCKAAEASGD--GVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDG-------------IVQFPVVF

Query:  VGGKMFGGLEKVMAAHISGELVPALKDAGALWL
        +GG++ GGL+++MA H++GELVP LK AGALWL
Subjt:  VGGKMFGGLEKVMAAHISGELVPALKDAGALWL

Q84TF4 Monothiol glutaredoxin-S137.1e-2351.92Show/hide
Query:  LVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIV----QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAG
        +V +NAVVV ARRGCC+ HV K LLL HG NP V+ +GE+D             +  D IV    + P++++GGK+FGGLE +MAAHI+G+LVP L+ AG
Subjt:  LVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIV----QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAG

Query:  ALWL
        ALWL
Subjt:  ALWL

Q9SGP6 Glutaredoxin-C93.6e-2751.38Show/hide
Query:  EASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFVGGKMFGGLEKVMAAHISGELVPA
        + +G+ V  +V +NAV+V+ RRGCCM HV++ LLLG G NPAV+ + E+ E +++ +       G  G V+ P V+VGG++FGGL++VMA HISGELVP 
Subjt:  EASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFVGGKMFGGLEKVMAAHISGELVPA

Query:  LKDAGALWL
        LK+ GALWL
Subjt:  LKDAGALWL

Arabidopsis top hitse value%identityAlignment
AT1G03850.1 Glutaredoxin family protein7.0e-1845.92Show/hide
Query:  LVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIV----QFPVVFVGGKMFGGLEKVMAAHISGELVPALKD
        +V +NAVVV ARRGCC+ HV K LLL HG NP V+ +GE+D             +  D IV    + P++++GGK+FGGLE +MAAHI+G  +    D
Subjt:  LVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIV----QFPVVFVGGKMFGGLEKVMAAHISGELVPALKD

AT1G03850.2 Glutaredoxin family protein5.0e-2451.92Show/hide
Query:  LVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIV----QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAG
        +V +NAVVV ARRGCC+ HV K LLL HG NP V+ +GE+D             +  D IV    + P++++GGK+FGGLE +MAAHI+G+LVP L+ AG
Subjt:  LVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIV----QFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAG

Query:  ALWL
        ALWL
Subjt:  ALWL

AT1G28480.1 Thioredoxin superfamily protein2.6e-2851.38Show/hide
Query:  EASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFVGGKMFGGLEKVMAAHISGELVPA
        + +G+ V  +V +NAV+V+ RRGCCM HV++ LLLG G NPAV+ + E+ E +++ +       G  G V+ P V+VGG++FGGL++VMA HISGELVP 
Subjt:  EASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFVGGKMFGGLEKVMAAHISGELVPA

Query:  LKDAGALWL
        LK+ GALWL
Subjt:  LKDAGALWL

AT3G02000.1 Thioredoxin superfamily protein1.0e-1642.11Show/hide
Query:  VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAV-----GEDDEVDIV------GKFAPGARDGNDGIVQFPVVFVGGKMFGGLEKVMAAHISG
        +E L S++AVV+ +   CCM H +K L  G G +PAV  +     G D +  ++      G  +PG+          PVVF+GGK+ G +++VMA+HI+G
Subjt:  VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAV-----GEDDEVDIV------GKFAPGARDGNDGIVQFPVVFVGGKMFGGLEKVMAAHISG

Query:  ELVPALKDAGALWL
         LVP LKDAGALWL
Subjt:  ELVPALKDAGALWL

AT5G14070.1 Thioredoxin superfamily protein2.0e-1740.98Show/hide
Query:  VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIV-------------------GKFAPGARDGNDGIVQFPVVFVGGKMFGGLEK
        +E + ++NAVV+ +   CCM H +K L  G G +PAV       E+D++                   G  +PGA          PVVF+GGKM G +E+
Subjt:  VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIV-------------------GKFAPGARDGNDGIVQFPVVFVGGKMFGGLEK

Query:  VMAAHISGELVPALKDAGALWL
        VMA+HI+G LVP LKDAGALWL
Subjt:  VMAAHISGELVPALKDAGALWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCAAGCGATTCCGTACAGGACGTGGATTCCGGCCGCCGCTTCTTCCTCCTCCTGCAAGGCAGCAGAGGCTTCCGGTGATGGGGTTGAAAAATTGGTGTCCAAGAA
CGCTGTTGTGGTTCTGGCGAGGCGTGGGTGTTGTATGAGCCATGTTTTGAAACTATTGTTGTTGGGCCACGGTGCCAACCCAGCCGTGATCGCCGTCGGCGAGGATGATG
AAGTCGATATTGTTGGAAAATTTGCCCCAGGCGCCAGAGATGGGAACGACGGGATAGTGCAATTTCCGGTGGTGTTTGTCGGCGGAAAGATGTTTGGTGGGTTGGAAAAA
GTGATGGCGGCTCATATTTCCGGTGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCTTTGTGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
CGGCAATACACAGAATTATCTCTCTCTCGAAATTAACTTTTTCTTTACCAAATTTGCAAAAATGCACCAAGCGATTCCGTACAGGACGTGGATTCCGGCCGCCGCTTCTT
CCTCCTCCTGCAAGGCAGCAGAGGCTTCCGGTGATGGGGTTGAAAAATTGGTGTCCAAGAACGCTGTTGTGGTTCTGGCGAGGCGTGGGTGTTGTATGAGCCATGTTTTG
AAACTATTGTTGTTGGGCCACGGTGCCAACCCAGCCGTGATCGCCGTCGGCGAGGATGATGAAGTCGATATTGTTGGAAAATTTGCCCCAGGCGCCAGAGATGGGAACGA
CGGGATAGTGCAATTTCCGGTGGTGTTTGTCGGCGGAAAGATGTTTGGTGGGTTGGAAAAAGTGATGGCGGCTCATATTTCCGGTGAATTGGTGCCGGCGTTAAAAGATG
CCGGTGCTTTGTGGCTTTGATCTTTAAAAGAGAGATAAAAATTTTCATAAAAAAGGAATCTAGTAATTTATATTGTTGATCTTTGAATTCTCCACAATTTACATCAAATT
TATGATCTCAAACACCTTGGATGCAGGGGAGAATTCCGAGACAGATTTGGTAGCTGAGATTCAAAAATCATGTAAATTATTTTGTTATTATTTAATAGCCACTAAACTAA
TTTTATTTCTGTATAAATTTGTTAGATGGGTGCAGTACAAATGGCACCCTAATTTTTATTTCTGTAAAATCTGAGAAAACTCAAAATATGTGGTTCTTTTTTGTTTTTTT
TAAGAGAAATCCTCCCTATAGTCTAAATTAAATGTTTGTCCATTTAAAATAAAATCCATTACTTATCTTTTTCTTCTGCGTG
Protein sequenceShow/hide protein sequence
MHQAIPYRTWIPAAASSSSCKAAEASGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVIAVGEDDEVDIVGKFAPGARDGNDGIVQFPVVFVGGKMFGGLEK
VMAAHISGELVPALKDAGALWL