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Clc01G24140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G24140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:34733719..34733952
RNA-Seq ExpressionClc01G24140
SyntenyClc01G24140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052636.1 hypothetical protein E6C27_scaffold120G002460 [Cucumis melo var. makuwa]2.9e-2174.03Show/hide
Query:  MTKSRLWVWLMLLASYCFAGSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
        M K  LWV L+LLASYCFAGS SRLL+P  AA S+RPALLGS+DNF IGLVAVE S +I QR  AR SPGGPDPRHH
Subjt:  MTKSRLWVWLMLLASYCFAGSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
KAE8647711.1 hypothetical protein Csa_003452 [Cucumis sativus]2.9e-1367.69Show/hide
Query:  CFA----GSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
        CFA     S SR L+P  AA S+RPALLGS+DNF IG+VAVE SG+I QR  AR SPGGPDPRHH
Subjt:  CFA----GSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
KAE8647712.1 hypothetical protein Csa_003203 [Cucumis sativus]3.9e-1874.67Show/hide
Query:  RLWVWLMLLASYCFAGSVSRLLQPHS-AANSYRPALLGSKDNFRIGLVA-VEDSGTIHQREAARQSPGGPDPRHH
        RLWV L+LLASY FA S SRLLQ     A SY+PALLGSK NF++ LVA VED GTIHQREAARQSPGGPDP HH
Subjt:  RLWVWLMLLASYCFAGSVSRLLQPHS-AANSYRPALLGSKDNFRIGLVA-VEDSGTIHQREAARQSPGGPDPRHH
KAG6581347.1 hypothetical protein SDJN03_21349, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1366.15Show/hide
Query:  FAGSVSRLL-----QPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
        F G+ SR L     +P+  A +YRPALLGSK+NF IGLVAVE SG+IHQR  AR SPGGPDPRHH
Subjt:  FAGSVSRLL-----QPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0KLM5 Uncharacterized protein1.9e-1874.67Show/hide
Query:  RLWVWLMLLASYCFAGSVSRLLQPHS-AANSYRPALLGSKDNFRIGLVA-VEDSGTIHQREAARQSPGGPDPRHH
        RLWV L+LLASY FA S SRLLQ     A SY+PALLGSK NF++ LVA VED GTIHQREAARQSPGGPDP HH
Subjt:  RLWVWLMLLASYCFAGSVSRLLQPHS-AANSYRPALLGSKDNFRIGLVA-VEDSGTIHQREAARQSPGGPDPRHH
A0A0A0KNI4 Uncharacterized protein3.1e-2171.43Show/hide
Query:  MTKSRLWVWLMLLASYCFAGSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
        M K  LWV L+L+ASYCFAGS SR L+P  AA S+RPALLGS+DNF IG+VAVE SG+I QR  AR SPGGPDPRHH
Subjt:  MTKSRLWVWLMLLASYCFAGSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
A0A5A7UEP5 Uncharacterized protein1.4e-2174.03Show/hide
Query:  MTKSRLWVWLMLLASYCFAGSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
        M K  LWV L+LLASYCFAGS SRLL+P  AA S+RPALLGS+DNF IGLVAVE S +I QR  AR SPGGPDPRHH
Subjt:  MTKSRLWVWLMLLASYCFAGSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAAGTCTAGATTGTGGGTGTGGCTGATGTTGTTGGCCTCCTACTGTTTTGCGGGCTCTGTTTCTCGACTACTTCAACCACACTCTGCGGCTAACTCATATCGGCC
AGCGCTGTTGGGTTCCAAAGATAACTTCCGAATTGGCCTGGTCGCCGTCGAAGACTCCGGAACCATTCATCAACGTGAGGCGGCGCGTCAGTCACCGGGAGGCCCTGATC
CCCGCCACCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAAGTCTAGATTGTGGGTGTGGCTGATGTTGTTGGCCTCCTACTGTTTTGCGGGCTCTGTTTCTCGACTACTTCAACCACACTCTGCGGCTAACTCATATCGGCC
AGCGCTGTTGGGTTCCAAAGATAACTTCCGAATTGGCCTGGTCGCCGTCGAAGACTCCGGAACCATTCATCAACGTGAGGCGGCGCGTCAGTCACCGGGAGGCCCTGATC
CCCGCCACCACTAA
Protein sequenceShow/hide protein sequence
MTKSRLWVWLMLLASYCFAGSVSRLLQPHSAANSYRPALLGSKDNFRIGLVAVEDSGTIHQREAARQSPGGPDPRHH