; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G24470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G24470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRAB GTPase homolog A1C
Genome locationClcChr01:34983048..34985803
RNA-Seq ExpressionClc01G24470
SyntenyClc01G24470
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0005768 - endosome (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134652.1 ras-related protein RABA1c [Cucumis sativus]5.0e-10990.68Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +E +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

XP_022142300.1 ras-related protein RABA1c [Momordica charantia]5.5e-10890.25Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLD KVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EASDDAAASAV+AKGEKIDISKDVS VKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

XP_022926120.1 ras-related protein RABA1c-like [Cucurbita moschata]1.1e-10890.25Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV+MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        ++ASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

XP_023518462.1 ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo]4.8e-10485.59Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+VIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRH+TYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAETES+YFMETSALE+TNVDNAF EVL QIYH+VSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EAS+DAAAS VLAKGE+IDISKDVSE+KKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

XP_038892728.1 ras-related protein RABA1c-like [Benincasa hispida]1.0e-10991.53Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EA+DDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

TrEMBL top hitse value%identityAlignment
A0A0A0KNM1 Uncharacterized protein2.4e-10990.68Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +E +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

A0A1S3B019 ras-related protein RABA1c-like2.4e-10990.68Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +E +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

A0A5D3CP64 Ras-related protein RABA1c2.4e-10990.68Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +E +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

A0A6J1IU78 ras-related protein RABA1c-like5.4e-10990.25Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV+MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        ++ASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

E5GC30 GTP-binding protein2.4e-10990.68Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +E +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

SwissProt top hitse value%identityAlignment
P40393 Ras-related protein RIC23.9e-9678.63Show/hide
Query:  SAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAYY
        + YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSL +DGKV+KAQIWDTAGQER                  YRAITSAYY
Subjt:  SAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAYY

Query:  RGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAI
        RGAVGALLVYDVTRHST+ENVE+WLKELRDHTDPNIVVMLVGNKSDLRHLVAV T++ K+FAE ESLYFMETSALE+TNV+NAFAEVLTQIY IVSK+++
Subjt:  RGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAI

Query:  EASDDAAASAVLAKGEKIDISKDVSEVKKGGCCS
        EA DDA +     KGEKI+I  DVS VKKGGCCS
Subjt:  EASDDAAASAVLAKGEKIDISKDVSEVKKGGCCS

Q01111 Ras-related protein YPT34.4e-9275Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+ YRA+D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT+SLN+D KVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRH TYENV +WLKELRDHTDPNIVVML+GNKSDLRHLVAVST++AK  AE E LYFMETSALEATNV+NAF E LTQIY IVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EA D+ A S+   KGE I+I  + S  KK GCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

Q39222 Ras-related protein RABA1b1.1e-9074.15Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGKV+KAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTR +T+ENV++WLKEL++HTDPNIVVMLVGNKSDLRHL+AV TED KS+AE ESL FMETSALEATNV++AFAEVLTQIY I SKK 
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EA +D  AS  + KGEKI++  DVS +KK GCCS+
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

Q9FK68 Ras-related protein RABA1c2.4e-9880.93Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D KVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHST+ENVE WLKELR+HTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEATNV+NAFAEVLTQI+HIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EA+ ++A   V +KG+KIDI KDVS VKKGGCCS+
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

Q9SN35 Ras-related protein RABA1d1.1e-9578.81Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ KVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHST+ENVE+WL+ELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALE+TNV+NAF+EVLTQIYH+VSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EA +D  +  V +KGEKID+  DVS VKK GCCS+
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

Arabidopsis top hitse value%identityAlignment
AT1G16920.1 RAB GTPase homolog A1B7.7e-9274.15Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGKV+KAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTR +T+ENV++WLKEL++HTDPNIVVMLVGNKSDLRHL+AV TED KS+AE ESL FMETSALEATNV++AFAEVLTQIY I SKK 
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EA +D  AS  + KGEKI++  DVS +KK GCCS+
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

AT3G15060.1 RAB GTPase homolog A1G3.0e-8871.01Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+AYRA+DDYD+L+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K++KAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRH T+ENVE+WLKELRDHT+ NIV+MLVGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALEA NV+NAF EVL+QIY + SKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISK--DVSEVKKGGCCSS
        ++  DD      L KG+ I++    DVSEVKK GCCSS
Subjt:  IEASDDAAASAVLAKGEKIDISK--DVSEVKKGGCCSS

AT4G18800.1 RAB GTPase homolog A1D8.0e-9778.81Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ KVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHST+ENVE+WL+ELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALE+TNV+NAF+EVLTQIYH+VSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EA +D  +  V +KGEKID+  DVS VKK GCCS+
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

AT5G45750.1 RAB GTPase homolog A1C1.7e-9980.93Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D KVIKAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRHST+ENVE WLKELR+HTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEATNV+NAFAEVLTQI+HIVSKKA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS
        +EA+ ++A   V +KG+KIDI KDVS VKKGGCCS+
Subjt:  IEASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

AT5G60860.1 RAB GTPase homolog A1F3.0e-8871.01Show/hide
Query:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY
        M+AYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K++KAQIWDTAGQER                  YRAITSAY
Subjt:  MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAY

Query:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA
        YRGAVGALLVYDVTRH T+ENVE+WLKELRDHTD NIV+M VGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALE+ NV+NAF EVL+QIY +VS+KA
Subjt:  YRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA

Query:  IEASDDAAASAVLAKGEKIDISK--DVSEVKKGGCCSS
        ++  DD AA   L KG+ I++    DVS VKK GCCS+
Subjt:  IEASDDAAASAVLAKGEKIDISK--DVSEVKKGGCCSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCCTATAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGA
GTTCAGCCTCGAATCTAAGTCTACTATTGGGGTTGAGTTTGCTACTCGCAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGACACTGCTGGCCAAGAAC
GGCATTACATGCTTGTTGGTACGAATTGCAAAGCAGATGCACCCAAAGTTCTCGAGTATAGAGCGATTACAAGTGCTTACTATCGAGGAGCAGTTGGTGCCCTGCTTGTT
TACGATGTTACACGACACTCCACCTATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAGTAATGCTAGTTGGGAACAAATCAGA
TCTTCGCCACCTTGTGGCGGTGTCAACCGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTCTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAATGTGGACAACG
CCTTTGCCGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATAGAAGCTAGCGATGATGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATCGAT
ATCAGTAAGGACGTCTCTGAGGTAAAGAAAGGCGGTTGTTGTTCCAGCTAG
mRNA sequenceShow/hide mRNA sequence
CCCTCTCTCTCTCTTTCTCCACGGCTGGAGGGCTTCTGAAAAATGTCTGCCTATAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGG
CGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGGGTTGAGTTTGCTACTCGCAGTTTGAATCTTGATGGCA
AGGTTATTAAGGCTCAGATTTGGGACACTGCTGGCCAAGAACGGCATTACATGCTTGTTGGTACGAATTGCAAAGCAGATGCACCCAAAGTTCTCGAGTATAGAGCGATT
ACAAGTGCTTACTATCGAGGAGCAGTTGGTGCCCTGCTTGTTTACGATGTTACACGACACTCCACCTATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCATAC
AGATCCCAACATTGTAGTAATGCTAGTTGGGAACAAATCAGATCTTCGCCACCTTGTGGCGGTGTCAACCGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTCTATT
TCATGGAAACCTCTGCCCTTGAAGCCACAAATGTGGACAACGCCTTTGCCGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATAGAAGCTAGCGATGAT
GCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATCGATATCAGTAAGGACGTCTCTGAGGTAAAGAAAGGCGGTTGTTGTTCCAGCTAGACTACCAATCTCTGAAG
TTGCTGCAGCAGCCTGAAGGTCATCTCGTTGCTCGACATCTATTTTACATTTTGTTTTACATATAGTACACCGTGGCCGTGTGAAATTTTTTTCCATAGAGGTAGGGGGA
TTCATGGGGATTGATTTGATGTATCTTACTGTTTTGATTACTGATATTTTAACTTCTGATGCCAAAAATATGCTTAAGCTTTATACTCAATTGACTTCGGGGAATTACAG
TTTTATACTCCTTTGACTTTGAGGGCTTTGTATCCAAGTACAGAATTGTTGTGGCTCTTAGTTTCAGAACTCCAAGGTTTCTCTTATCTCTTGTGTGAAC
Protein sequenceShow/hide protein sequence
MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERHYMLVGTNCKADAPKVLEYRAITSAYYRGAVGALLV
YDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAIEASDDAAASAVLAKGEKID
ISKDVSEVKKGGCCSS