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Clc01G24480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G24480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLeucine-rich repeat protein kinase family protein
Genome locationClcChr01:34990038..34990564
RNA-Seq ExpressionClc01G24480
SyntenyClc01G24480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647723.1 hypothetical protein Csa_003961 [Cucumis sativus]8.3e-3684.85Show/hide
Query:  MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR
        MSIPELPFSPSN        PKVQRVSKSTSDRLLQKFFDATEFGFDYE SGLWSPPLQR+VYL+SSGQ+ NQTDLHTKLQTVLNSRSR H KSCFKFR
Subjt:  MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR

KAG6581370.1 hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia]3.5e-3478.79Show/hide
Query:  MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR
        MSIPELPFSPSNFIA S+ TP VQ+VSK+TSDRLLQKFFDATEFGFDYE SGLWSPPLQRSVYLS+SG++FNQ DLH KL++VL+SR +R  K  FKFR
Subjt:  MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR

KAG7026513.1 hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2471.59Show/hide
Query:  ASNTTPK-VQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFRENL
        ++  TPK VQRV KSTSDRLLQKF DATEFGFDY+TSGLWSPPLQR+VYLSSSG++FN TDL  KL+ VL+S   R   SCFKFR+ L
Subjt:  ASNTTPK-VQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFRENL

KAG7034657.1 hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-3765.69Show/hide
Query:  MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR-
        MSIPELPFSPSNFIA S+ TP VQ+VSK+TSDRLLQKFFDATEFGFDYE SGLWSPPLQRSVYLS+SG++FNQ DLH KL++VL+SR +R  K  FKFR 
Subjt:  MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR-

Query:  -------------------ENLKAVIFSAMLPSFLNG
                            NLKA IF+AMLP F  G
Subjt:  -------------------ENLKAVIFSAMLPSFLNG

XP_038892892.1 uncharacterized protein LOC120081796 [Benincasa hispida]1.0e-4193Show/hide
Query:  MSIPELPFSPSNFIAAS-NTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR
        MSIP+LPFSPSNFIA S N TPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQ+FNQTDLHTKLQTVLNSR RRH KSCFKFR
Subjt:  MSIPELPFSPSNFIAAS-NTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ8 Uncharacterized protein4.0e-3684.85Show/hide
Query:  MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR
        MSIPELPFSPSN        PKVQRVSKSTSDRLLQKFFDATEFGFDYE SGLWSPPLQR+VYL+SSGQ+ NQTDLHTKLQTVLNSRSR H KSCFKFR
Subjt:  MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFR

A0A2I4H1F6 uncharacterized protein LOC109012687 isoform X37.6e-1952Show/hide
Query:  MSIPELPFSPSNFIAA--SNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVL--NSRSRRHNKSCF
        MSIPE PFS S+   +    ++ +V+ VSK  SDRL+QKF+D +EFGFDYE SGLWSPP+QR+V++SSSG++F + D+ +KL++ L  + R R+H   CF
Subjt:  MSIPELPFSPSNFIAA--SNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVL--NSRSRRHNKSCF

A0A2I4H1H1 uncharacterized protein LOC109012687 isoform X27.6e-1952Show/hide
Query:  MSIPELPFSPSNFIAA--SNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVL--NSRSRRHNKSCF
        MSIPE PFS S+   +    ++ +V+ VSK  SDRL+QKF+D +EFGFDYE SGLWSPP+QR+V++SSSG++F + D+ +KL++ L  + R R+H   CF
Subjt:  MSIPELPFSPSNFIAA--SNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVL--NSRSRRHNKSCF

A0A2I4H1I2 uncharacterized protein LOC109012687 isoform X17.6e-1952Show/hide
Query:  MSIPELPFSPSNFIAA--SNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVL--NSRSRRHNKSCF
        MSIPE PFS S+   +    ++ +V+ VSK  SDRL+QKF+D +EFGFDYE SGLWSPP+QR+V++SSSG++F + D+ +KL++ L  + R R+H   CF
Subjt:  MSIPELPFSPSNFIAA--SNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVL--NSRSRRHNKSCF

A0A540M7J9 Uncharacterized protein1.7e-1858.23Show/hide
Query:  TTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFK
        T+P VQ V KSTSDRLLQKFFDA EF FDYE SGLWSPP++R+V+LSS G++F + ++  +L T+ ++   RH+K+CF+
Subjt:  TTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCCCCGAACTGCCATTTTCACCTTCTAATTTCATTGCCGCTTCCAATACAACTCCAAAGGTTCAGAGAGTATCCAAATCCACTTCAGACAGATTGCTTCAGAA
ATTCTTCGACGCCACAGAATTTGGTTTTGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTAAGCTCTTCGGGTCAACTTTTCAATCAAA
CGGATTTGCATACGAAACTTCAGACAGTGTTGAATTCTCGTAGTAGAAGACATAATAAAAGTTGTTTCAAATTCAGAGAAAATCTGAAAGCTGTCATCTTTAGTGCTATG
CTTCCATCTTTCCTTAATGGGGATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATCCCCGAACTGCCATTTTCACCTTCTAATTTCATTGCCGCTTCCAATACAACTCCAAAGGTTCAGAGAGTATCCAAATCCACTTCAGACAGATTGCTTCAGAA
ATTCTTCGACGCCACAGAATTTGGTTTTGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTAAGCTCTTCGGGTCAACTTTTCAATCAAA
CGGATTTGCATACGAAACTTCAGACAGTGTTGAATTCTCGTAGTAGAAGACATAATAAAAGTTGTTTCAAATTCAGAGAAAATCTGAAAGCTGTCATCTTTAGTGCTATG
CTTCCATCTTTCCTTAATGGGGATGGATGA
Protein sequenceShow/hide protein sequence
MSIPELPFSPSNFIAASNTTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQLFNQTDLHTKLQTVLNSRSRRHNKSCFKFRENLKAVIFSAM
LPSFLNGDG