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Clc01G24490 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G24490
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPrecursor of CEP14
Genome locationClcChr01:34995899..34996287
RNA-Seq ExpressionClc01G24490
SyntenyClc01G24490
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFQ06984.1 hypothetical protein PHJA_002842500 [Phtheirospermum japonicum]2.0e-0762.07Show/hide
Query:  MPSP-NTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHL------VESVPSPGVGH
        +PSP ++L++AALPKGTVP STPSKK HA   D  L ARHL      + SVPSPGVGH
Subjt:  MPSP-NTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHL------VESVPSPGVGH

KAG7026512.1 Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2276.19Show/hide
Query:  RFTLITCSLILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVESVPSPGVGH
        RFTLITC L+L LLFASS  TS AARL   LPT PSP++LFLAALPKGTVP+S PSKK HA  LD  LTARHLVESVPSPG+GH
Subjt:  RFTLITCSLILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVESVPSPGVGH

KAG7034658.1 Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1869.77Show/hide
Query:  MPRFTLITCSLILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVESVPSPGVGH
        M  F LIT  LIL LLFASS PTS AARLLR        ++LFLAALPKGTVP+STPSKK HA  LD  LTARHLV+SVPSPG+GH
Subjt:  MPRFTLITCSLILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVESVPSPGVGH

PLY74640.1 hypothetical protein LSAT_7X25601 [Lactuca sativa]2.0e-0750.62Show/hide
Query:  ILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLV------ESVPSPGVGH
        I+ +LF SS   S   +LL      P   +L+L ALPKGTVP STPSKK HA   D  L  RHL+       SVPSPGVGH
Subjt:  ILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLV------ESVPSPGVGH

XP_028764797.1 precursor of CEP14 [Prosopis alba]9.6e-1052.04Show/hide
Query:  MPRFTLITCSLILALLFAS--SFPTSRAARL----LRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLV------ESVPSPGVGH
        M RF   T  LI ++L AS  SF  +R  R+     RP+ T PS ++LFL+ALPKGTVP+STPSKK HA  +D  L ARHL+       SVPSPG GH
Subjt:  MPRFTLITCSLILALLFAS--SFPTSRAARL----LRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLV------ESVPSPGVGH

TrEMBL top hitse value%identityAlignment
A0A0A0KKF2 Uncharacterized protein2.7e-2681.4Show/hide
Query:  MPRFTLITCSLILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVESVPSPGVGH
        MPRFT IT SLILALLFA S PTS AARLL P  TMPSPNTLFL ALPKGT+PTS+PSKKVH+  L HNLTARHLV+SVPSPGVGH
Subjt:  MPRFTLITCSLILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVESVPSPGVGH

A0A2J6KHS4 Uncharacterized protein9.7e-0850.62Show/hide
Query:  ILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLV------ESVPSPGVGH
        I+ +LF SS   S   +LL      P   +L+L ALPKGTVP STPSKK HA   D  L  RHL+       SVPSPGVGH
Subjt:  ILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLV------ESVPSPGVGH

A0A7N2LQP2 Uncharacterized protein9.7e-0864.15Show/hide
Query:  NTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVE------SVPSPGVGH
        ++LFL+ALPKGTVP+STPSKK HA  +D  L ARHL+       SVPSPGVGH
Subjt:  NTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVE------SVPSPGVGH

K7L653 Uncharacterized protein1.7e-0748.86Show/hide
Query:  TCSLILALLFASSFPTSRAARLLRPLPTMPSP--NTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLV-------ESVPSPGVGH
        T  L+  LLFAS      A +L+      PS   ++LFL+ALPKGTVP S+PSKK H+  +D  L ARHL+        SVPSPGVGH
Subjt:  TCSLILALLFASSFPTSRAARLLRPLPTMPSP--NTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLV-------ESVPSPGVGH

M1CRR9 Uncharacterized protein1.3e-0747.73Show/hide
Query:  TCSLILALLFASSFPTSRAARLL---RPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHL------VESVPSPGVGH
        T  L++ +LF +SF +S  AR L     +  +P+  +L+L ALPKG VP STPSKK H+   D  L ARHL      + SVPSPGVGH
Subjt:  TCSLILALLFASSFPTSRAARLL---RPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHL------VESVPSPGVGH

SwissProt top hitse value%identityAlignment
Q52K95 Precursor of CEP142.3e-0655.77Show/hide
Query:  TLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHL------VESVPSPGVGH
        T  L+ALPKG +P STPSKK HA      L +RHL      + SVPSPGVGH
Subjt:  TLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHL------VESVPSPGVGH

Arabidopsis top hitse value%identityAlignment
AT1G29290.1 unknown protein1.6e-0755.77Show/hide
Query:  TLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHL------VESVPSPGVGH
        T  L+ALPKG +P STPSKK HA      L +RHL      + SVPSPGVGH
Subjt:  TLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHL------VESVPSPGVGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCTTCACACTCATCACTTGCTCTCTCATTTTGGCTCTTCTATTCGCATCCTCTTTTCCCACTTCACGCGCCGCCAGACTCCTCCGGCCACTCCCAACC
ATGCCCTCTCCCAACACCCTCTTTCTCGCCGCCCTTCCCAAGGGCACCGTCCCCACTTCCACTCCCAGCAAGAAAGTTCATGCCCGGCCTCTCGACCACAACCTC
ACCGCCCGCCACCTTGTAGAGTCCGTTCCAAGCCCCGGCGTCGGCCATTAG
mRNA sequenceShow/hide mRNA sequence
CTATAAATAACCAACCCTCCACACCTCTCTCCATATTTCAACCAATTTCACCACTATTCTCTCCTTCTATACCTCTCCTTATTATTTTATTTTGATCTCCATGCC
TCGCTTCACACTCATCACTTGCTCTCTCATTTTGGCTCTTCTATTCGCATCCTCTTTTCCCACTTCACGCGCCGCCAGACTCCTCCGGCCACTCCCAACCATGCC
CTCTCCCAACACCCTCTTTCTCGCCGCCCTTCCCAAGGGCACCGTCCCCACTTCCACTCCCAGCAAGAAAGTTCATGCCCGGCCTCTCGACCACAACCTCACCGC
CCGCCACCTTGTAGAGTCCGTTCCAAGCCCCGGCGTCGGCCATTAGGTCACCACCACCAACAACATCTTACAAA
Protein sequenceShow/hide protein sequence
MPRFTLITCSLILALLFASSFPTSRAARLLRPLPTMPSPNTLFLAALPKGTVPTSTPSKKVHARPLDHNLTARHLVESVPSPGVGH