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Clc01G25100 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G25100
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:35376942..35377373
RNA-Seq ExpressionClc01G25100
SyntenyClc01G25100
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR62900.1 hypothetical protein CICLE_v10017350mg [Citrus clementina]3.4e-0960Show/hide
Query:  KTKKRRTFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF
        K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A FFFLCCG  F
Subjt:  KTKKRRTFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF

KAG6581417.1 hypothetical protein SDJN03_21419, partial [Cucurbita argyrosperma subsp. sororia]8.4e-2488.24Show/hide
Query:  MDDAIDMKKTKKRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFF
        MDDAID KKTKKRR FS QRLRDSWKWKFL+DFKWKRLNL IGF DAIIFRI SLFEAIAL+GIAGFF
Subjt:  MDDAIDMKKTKKRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFF

KAG7034699.1 hypothetical protein SDJN02_04429, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2789.04Show/hide
Query:  MDDAIDMKKTKKRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCG
        MDDAID KKTKKRR FS QRLRDSWKWKFL+DFKWKRLNL IGF DAIIFRI SLFEAIAL+GIAGFFFLCCG
Subjt:  MDDAIDMKKTKKRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCG

KGN49382.1 hypothetical protein Csa_004198 [Cucumis sativus]6.8e-2685.33Show/hide
Query:  MDDAIDMKKTK--KRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCG
        MDDAID KKTK  K+R FSFQRLRDSWKWKFL++FKWKRLNLQ+GFFDAIIFRIVSLFE +ALVGIA FFFLCCG
Subjt:  MDDAIDMKKTK--KRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCG

XP_030972441.1 uncharacterized protein LOC115992393 [Quercus lobata]1.5e-0957.97Show/hide
Query:  KKRRTFSFQRLR--DSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF
        KK R   F+RLR   +W+WKFL   FKWKRLNLQ+ F D ++FRI+S+FEAI LV    FF+LCCG  F
Subjt:  KKRRTFSFQRLR--DSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF

TrEMBL top hitse value%identityAlignment
A0A067GHI9 Uncharacterized protein1.7e-0960Show/hide
Query:  KTKKRRTFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF
        K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A FFFLCCG  F
Subjt:  KTKKRRTFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF

A0A0A0KLX9 Uncharacterized protein3.3e-2685.33Show/hide
Query:  MDDAIDMKKTK--KRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCG
        MDDAID KKTK  K+R FSFQRLRDSWKWKFL++FKWKRLNLQ+GFFDAIIFRIVSLFE +ALVGIA FFFLCCG
Subjt:  MDDAIDMKKTK--KRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCG

A0A1R3FVP9 Uncharacterized protein2.8e-0948.05Show/hide
Query:  MDDAIDMKKTKKRRTFSFQRLRDSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF
        MD       + KR     + +++SW+WKFL   FKWKRLN+Q+ FFD ++FRI S+ EAI LV    FF+LCCG  F
Subjt:  MDDAIDMKKTKKRRTFSFQRLRDSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF

A0A7N2LSF8 Uncharacterized protein7.4e-1057.97Show/hide
Query:  KKRRTFSFQRLR--DSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF
        KK R   F+RLR   +W+WKFL   FKWKRLNLQ+ F D ++FRI+S+FEAI LV    FF+LCCG  F
Subjt:  KKRRTFSFQRLR--DSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF

V4UFE9 Uncharacterized protein1.7e-0960Show/hide
Query:  KTKKRRTFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF
        K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A FFFLCCG  F
Subjt:  KTKKRRTFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G46295.1 unknown protein1.4e-0542.03Show/hide
Query:  KKTKKRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF
        K TK+R    F  L            KWKRLNL++ F + + +RI+S+ EA+ LV    FFFLCCG  F
Subjt:  KKTKKRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGCAATTGACATGAAGAAGACGAAGAAGAGGAGAACATTCAGCTTCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTCCTTAGAGATTTCAAGTGGAAGAG
ATTGAATCTCCAGATCGGTTTCTTTGATGCTATAATTTTCCGAATCGTTTCTCTGTTTGAGGCCATTGCGTTAGTAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCG
TATTTTTTTTCAAGTCATTCTTAATTCGTTCATTAATTCTGTCTCTCGCTAAGCACTCTGCAAGCGAAAATAATGTCGAATTACGCTTCTCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGCAATTGACATGAAGAAGACGAAGAAGAGGAGAACATTCAGCTTCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTCCTTAGAGATTTCAAGTGGAAGAG
ATTGAATCTCCAGATCGGTTTCTTTGATGCTATAATTTTCCGAATCGTTTCTCTGTTTGAGGCCATTGCGTTAGTAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCG
TATTTTTTTTCAAGTCATTCTTAATTCGTTCATTAATTCTGTCTCTCGCTAAGCACTCTGCAAGCGAAAATAATGTCGAATTACGCTTCTCTTTGTGA
Protein sequenceShow/hide protein sequence
MDDAIDMKKTKKRRTFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGVFFFKSFLIRSLILSLAKHSASENNVELRFSL