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Clc01G25710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G25710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPSI-K
Genome locationClcChr01:35865536..35867189
RNA-Seq ExpressionClc01G25710
SyntenyClc01G25710
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017493 - Photosystem I reaction centre subunit PsaK, chloroplastic
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic
IPR035982 - Photosystem I reaction centre subunit PsaK superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581462.1 ABC transporter C family member 12, partial [Cucurbita argyrosperma subsp. sororia]2.1e-6199.22Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MAATMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGS
        FTLADTLACGSVGHIIGVGVVLGLKSIGS
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGS

KAG7034753.1 Photosystem I reaction center subunit psaK, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.6e-6198.46Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MAATMMTSIPQF GLRPT+SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

XP_022977533.1 photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita maxima]6.2e-6197.69Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEAR+SGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

XP_023543618.1 photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp. pepo]2.1e-6198.46Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

XP_038883621.1 photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida]9.6e-6298.46Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MAATMMTSIPQFNGLRPTVS+APVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

TrEMBL top hitse value%identityAlignment
A0A1S3AZR1 PSI-K3.9e-6196.92Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MAATMMT +PQFNGLRPT SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLK IGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

A0A5A7U9C9 PSI-K3.9e-6196.92Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MAATMMT +PQFNGLRPT SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLK IGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

A0A6J1CZY3 PSI-K5.1e-6196.92Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MA TMMTSIPQF+GL+PTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

A0A6J1EJV0 PSI-K5.1e-6197.69Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGG ALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

A0A6J1IQ95 PSI-K3.0e-6197.69Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG
        MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEAR+SGLQTGDPAG
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAG

Query:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL
        FTLADTLACGSVGHIIGVGVVLGLKSIGSL
Subjt:  FTLADTLACGSVGHIIGVGVVLGLKSIGSL

SwissProt top hitse value%identityAlignment
P14225 Photosystem I reaction center subunit psaK, chloroplastic5.5e-2050Show/hide
Query:  AVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKL--EARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKS
        A++P +     ++  R   +IGS TNLIMV ST+  L A RFGLAP+  + +TAGLKL      +G+ + DPAGFT+ D LA G+ GH +GVG+VLGLK 
Subjt:  AVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKL--EARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKS

Query:  IGSL
        IG+L
Subjt:  IGSL

P36886 Photosystem I reaction center subunit psaK, chloroplastic1.1e-3971.2Show/hide
Query:  MTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLAD
        MTS+PQF+GLR   + +  RS+  +  LRRR    +  RC DYIGS TNLIMV +T+LMLFAGRFGLAPSANRK+TAGLKLEAR+SGLQTGDPAGFTLAD
Subjt:  MTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLAD

Query:  TLACGSVGHIIGVGVVLGLKSIGSL
        TLACG+VGHI+GVG+VLGLK+ G L
Subjt:  TLACGSVGHIIGVGVVLGLKSIGSL

P42051 Photosystem I reaction center subunit psaK, chloroplastic (Fragment)6.8e-1096.88Show/hide
Query:  DYIGSPTNLIMVISTSLMLFAGRFGLAPSANR
        DYIGSPTN+IMVISTSLMLFAGRFGLAPSANR
Subjt:  DYIGSPTNLIMVISTSLMLFAGRFGLAPSANR

Q9SUI5 Photosystem I reaction center subunit psaK, chloroplastic2.1e-5179.39Show/hide
Query:  MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPA
        MA+TMMT++PQFNGLR T +S APV+ L +VQP+RR+G GAL A+C D+IGS TNLIMV ST+LMLFAGRFGLAPSANRK+TAGL+LEARDSGLQTGDPA
Subjt:  MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPA

Query:  GFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GFTLADTLACG+VGHIIGVGVVLGLK+IG++
Subjt:  GFTLADTLACGSVGHIIGVGVVLGLKSIGSL

Q9ZT05 Photosystem I reaction center subunit psaK, chloroplastic6.9e-4775Show/hide
Query:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPL-RRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPA
        MA +MMT++PQF GLRP +  +P++ LVA QP+ RR+G GAL  RC D+IGS TN+IMV ST+LMLFAGRFGLAPSANRK+TAGLKLE RDSGLQTGDPA
Subjt:  MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPL-RRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPA

Query:  GFTLADTLACGSVGHIIGVGVVLGLKSI
        GFTLADTLACG+VGHIIGVGVVLGL+++
Subjt:  GFTLADTLACGSVGHIIGVGVVLGLKSI

Arabidopsis top hitse value%identityAlignment
AT1G30380.1 photosystem I subunit K1.5e-5279.39Show/hide
Query:  MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPA
        MA+TMMT++PQFNGLR T +S APV+ L +VQP+RR+G GAL A+C D+IGS TNLIMV ST+LMLFAGRFGLAPSANRK+TAGL+LEARDSGLQTGDPA
Subjt:  MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPA

Query:  GFTLADTLACGSVGHIIGVGVVLGLKSIGSL
        GFTLADTLACG+VGHIIGVGVVLGLK+IG++
Subjt:  GFTLADTLACGSVGHIIGVGVVLGLKSIGSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTACCATGATGACTTCGATCCCTCAGTTTAATGGGCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGCCTGGTGGCGGTGCAACCGCTGAGGCGGAGGGG
CGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCCACCAACTTGATAATGGTGATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTC
CATCCGCAAACAGAAAATCAACGGCGGGGCTGAAGCTGGAGGCGAGGGACTCCGGGTTACAGACGGGTGACCCAGCGGGTTTCACCCTTGCTGATACTTTGGCATGTGGC
AGCGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGAGCATTGGTTCACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTACCATGATGACTTCGATCCCTCAGTTTAATGGGCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGCCTGGTGGCGGTGCAACCGCTGAGGCGGAGGGG
CGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCCACCAACTTGATAATGGTGATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTC
CATCCGCAAACAGAAAATCAACGGCGGGGCTGAAGCTGGAGGCGAGGGACTCCGGGTTACAGACGGGTGACCCAGCGGGTTTCACCCTTGCTGATACTTTGGCATGTGGC
AGCGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGAGCATTGGTTCACTGTAA
Protein sequenceShow/hide protein sequence
MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACG
SVGHIIGVGVVLGLKSIGSL