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Clc01G26430 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G26430
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMitochondrial import inner membrane translocase subunit TIM22-4-like
Genome locationClcChr01:36497038..36499928
RNA-Seq ExpressionClc01G26430
SyntenyClc01G26430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039024.1 uncharacterized protein E6C27_scaffold84G001110 [Cucumis melo var. makuwa]4.1e-2254.9Show/hide
Query:  FTKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKTFGMLYIRHRSASVMIKEILLNLPFGEKGHFLWMAGVCAI
        FT  +LE HPFRLGRRDVRVWS NPLEGFS KSF + +V+PS  G LV+S++ R+K+ RKTF + Y  HR   VMI+++L N P  E  HFL  + VC +
Subjt:  FTKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKTFGMLYIRHRSASVMIKEILLNLPFGEKGHFLWMAGVCAI

Query:  LY
         +
Subjt:  LY

KAA0043240.1 zinc finger protein ZPR1-like [Cucumis melo var. makuwa]1.9e-1144.95Show/hide
Query:  LLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT------------FGMLYIRHRSASVMIKEILLNLPFGEKGHFL
        LLEG  FR GRRDVRVWS NP      KS F  L+DPSP    V+ V+ R K+P+K              G  + R RS    I+E LL+L F +KG F 
Subjt:  LLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT------------FGMLYIRHRSASVMIKEILLNLPFGEKGHFL

Query:  WMAGVCAIL
        W+A V  IL
Subjt:  WMAGVCAIL

KAA0060009.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo var. makuwa]6.5e-1239.85Show/hide
Query:  TKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT--------------------FGMLYIR--------HRSAS
        T   +    FRLGRRDVRVWS NP+EGFS KSFFR LV+ S +   V+ VL  +KIP+K+                    FG  + +         R+  
Subjt:  TKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT--------------------FGMLYIR--------HRSAS

Query:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG
        +MI E LL+  F  KGHFL   GVC +++  CG
Subjt:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG

TYJ97267.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo var. makuwa]6.5e-1239.85Show/hide
Query:  TKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT--------------------FGMLYIR--------HRSAS
        T   +    FRLGRRDVRVWS NP+EGFS KSFFR LV+ S +   V+ VL  +KIP+K+                    FG  + +         R+  
Subjt:  TKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT--------------------FGMLYIR--------HRSAS

Query:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG
        +MI E LL+  F  KGHFL   GVC +++  CG
Subjt:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]4.7e-1845.11Show/hide
Query:  LLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRK-------------------------------TFGMLYIRHRSAS
        LLE H FRLGRRDV VWS  PLEGF  KSFF+CLV+ +P    V S++ RIK+PRK                               TFG+ Y RHR   
Subjt:  LLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRK-------------------------------TFGMLYIRHRSAS

Query:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG
          ++E LLN P GE+G FLW A V A L G  G
Subjt:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG

TrEMBL top hitse value%identityAlignment
A0A5A7T6A8 Uncharacterized protein2.0e-2254.9Show/hide
Query:  FTKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKTFGMLYIRHRSASVMIKEILLNLPFGEKGHFLWMAGVCAI
        FT  +LE HPFRLGRRDVRVWS NPLEGFS KSF + +V+PS  G LV+S++ R+K+ RKTF + Y  HR   VMI+++L N P  E  HFL  + VC +
Subjt:  FTKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKTFGMLYIRHRSASVMIKEILLNLPFGEKGHFLWMAGVCAI

Query:  LY
         +
Subjt:  LY

A0A5A7TIU4 Zinc finger protein ZPR1-like9.2e-1244.95Show/hide
Query:  LLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT------------FGMLYIRHRSASVMIKEILLNLPFGEKGHFL
        LLEG  FR GRRDVRVWS NP      KS F  L+DPSP    V+ V+ R K+P+K              G  + R RS    I+E LL+L F +KG F 
Subjt:  LLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT------------FGMLYIRHRSASVMIKEILLNLPFGEKGHFL

Query:  WMAGVCAIL
        W+A V  IL
Subjt:  WMAGVCAIL

A0A5A7V2G8 Mitochondrial import inner membrane translocase subunit TIM22-4-like3.2e-1239.85Show/hide
Query:  TKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT--------------------FGMLYIR--------HRSAS
        T   +    FRLGRRDVRVWS NP+EGFS KSFFR LV+ S +   V+ VL  +KIP+K+                    FG  + +         R+  
Subjt:  TKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT--------------------FGMLYIR--------HRSAS

Query:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG
        +MI E LL+  F  KGHFL   GVC +++  CG
Subjt:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG

A0A5D3BDR8 Mitochondrial import inner membrane translocase subunit TIM22-4-like3.2e-1239.85Show/hide
Query:  TKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT--------------------FGMLYIR--------HRSAS
        T   +    FRLGRRDVRVWS NP+EGFS KSFFR LV+ S +   V+ VL  +KIP+K+                    FG  + +         R+  
Subjt:  TKDLLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKT--------------------FGMLYIR--------HRSAS

Query:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG
        +MI E LL+  F  KGHFL   GVC +++  CG
Subjt:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG

A0A5D3CI74 Calpain-type cysteine protease DEK12.3e-1845.11Show/hide
Query:  LLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRK-------------------------------TFGMLYIRHRSAS
        LLE H FRLGRRDV VWS  PLEGF  KSFF+CLV+ +P    V S++ RIK+PRK                               TFG+ Y RHR   
Subjt:  LLEGHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRK-------------------------------TFGMLYIRHRSAS

Query:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG
          ++E LLN P GE+G FLW A V A L G  G
Subjt:  VMIKEILLNLPFGEKGHFLWMAGVCAILYGSCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATGGCGGCAAAACCTCCAGTCTGCCCCCGCACACGTGATCCTCCAGCGAAACTCTTGCTTATCTCTCATCGCCACTCTTTCAATTCATTTTATAAAATTAAAAT
GTCTTTTAAAATCAACAAGGAACAAACAGGAAGAAGCAGAGGATCTGTTGTTATTGGAGATCAGCGAAGGAAGAGGAAAATGAAAGGGATTAAAAACCCAGAAAGGGAAG
CAATTGATTTGGTGAATTGTGATTGTGAGAAGAAAAGAGGTTGTTTGTTTGTTCTTAGGTCTGTGTACTGTTGGGGAAAGAAAGGGAGGGAGGAGGGGAGAAGGGAAGGA
AGGAAAAAGGAAAAAGGAAAAGGAAAGTGGGGGAAACTGAAGGGTGAAGCGAAAAAGTCTACGTTTGCAGCATTGGGTGCTTGTGAGATTCTGGGATTGTGGCCTGATGA
TGAGAGCAAAAGGTGCCCTTTTATGGGTGGTAGGCTAACTCTTACCCGTTCGGTTGTTTACACTTTTACCTATTTGCTTCACCTTTTTATGGTAGCTCAAGGGATTGGAA
GGGAATGGGGAATTTCTTGCAAGATGAAGGAACGAGGGATCATAGAGTGGATCAAAAATTGGTTGTTGGTTTTTGAGTATAAATGGGGATTTACGAAAGACTTACTTGAG
GGTCACCCCTTTAGATTAGGGAGAAGGGATGTTCGTGTTTGGAGCGCCAATCCTTTGGAAGGGTTTTCTGGAAAGTCTTTCTTTCGGTGTTTGGTTGATCCCTCTCCCTT
AGGTGTGTTGGTTTATTCGGTTCTTTCGAGGATTAAGATTCCTAGGAAGACGTTTGGCATGTTGTATATTCGTCATAGAAGTGCTAGTGTTATGATCAAGGAGATCCTTC
TCAATTTGCCTTTCGGGGAAAAGGGTCACTTTTTATGGATGGCGGGGGTGTGTGCAATTTTATATGGGTCTTGTGGGGTGAGCGGAACAATAGGGTGTTTAAGGGGATGG
ATAGGGATCCTAGGGAGATTTTACCCCTTGCCTGCTTTCATGCTCTTCGTGGACTTCGATTTGAAAGACCTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTATGGCGGCAAAACCTCCAGTCTGCCCCCGCACACGTGATCCTCCAGCGAAACTCTTGCTTATCTCTCATCGCCACTCTTTCAATTCATTTTATAAAATTAAAAT
GTCTTTTAAAATCAACAAGGAACAAACAGGAAGAAGCAGAGGATCTGTTGTTATTGGAGATCAGCGAAGGAAGAGGAAAATGAAAGGGATTAAAAACCCAGAAAGGGAAG
CAATTGATTTGGTGAATTGTGATTGTGAGAAGAAAAGAGGTTGTTTGTTTGTTCTTAGGTCTGTGTACTGTTGGGGAAAGAAAGGGAGGGAGGAGGGGAGAAGGGAAGGA
AGGAAAAAGGAAAAAGGAAAAGGAAAGTGGGGGAAACTGAAGGGTGAAGCGAAAAAGTCTACGTTTGCAGCATTGGGTGCTTGTGAGATTCTGGGATTGTGGCCTGATGA
TGAGAGCAAAAGGTGCCCTTTTATGGGTGGTAGGCTAACTCTTACCCGTTCGGTTGTTTACACTTTTACCTATTTGCTTCACCTTTTTATGGTAGCTCAAGGGATTGGAA
GGGAATGGGGAATTTCTTGCAAGATGAAGGAACGAGGGATCATAGAGTGGATCAAAAATTGGTTGTTGGTTTTTGAGTATAAATGGGGATTTACGAAAGACTTACTTGAG
GGTCACCCCTTTAGATTAGGGAGAAGGGATGTTCGTGTTTGGAGCGCCAATCCTTTGGAAGGGTTTTCTGGAAAGTCTTTCTTTCGGTGTTTGGTTGATCCCTCTCCCTT
AGGTGTGTTGGTTTATTCGGTTCTTTCGAGGATTAAGATTCCTAGGAAGACGTTTGGCATGTTGTATATTCGTCATAGAAGTGCTAGTGTTATGATCAAGGAGATCCTTC
TCAATTTGCCTTTCGGGGAAAAGGGTCACTTTTTATGGATGGCGGGGGTGTGTGCAATTTTATATGGGTCTTGTGGGGTGAGCGGAACAATAGGGTGTTTAAGGGGATGG
ATAGGGATCCTAGGGAGATTTTACCCCTTGCCTGCTTTCATGCTCTTCGTGGACTTCGATTTGAAAGACCTTTTGTAA
Protein sequenceShow/hide protein sequence
MVMAAKPPVCPRTRDPPAKLLLISHRHSFNSFYKIKMSFKINKEQTGRSRGSVVIGDQRRKRKMKGIKNPEREAIDLVNCDCEKKRGCLFVLRSVYCWGKKGREEGRREG
RKKEKGKGKWGKLKGEAKKSTFAALGACEILGLWPDDESKRCPFMGGRLTLTRSVVYTFTYLLHLFMVAQGIGREWGISCKMKERGIIEWIKNWLLVFEYKWGFTKDLLE
GHPFRLGRRDVRVWSANPLEGFSGKSFFRCLVDPSPLGVLVYSVLSRIKIPRKTFGMLYIRHRSASVMIKEILLNLPFGEKGHFLWMAGVCAILYGSCGVSGTIGCLRGW
IGILGRFYPLPAFMLFVDFDLKDLL