CuGenDBv2

Gene ID	Clc01G26500
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Transmembrane protein
Genome location	ClcChr01:36550053..36551758
RNA-Seq Expression	Clc01G26500
Synteny	Clc01G26500
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052430.1 uncharacterized protein E6C27_scaffold120G00260 [Cucumis melo var. makuwa]

1.3e-80

85.25

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNPSLACNY R+DLKRMA GHLRSIGRRNNG+RKLTVF+VTEGSAKSSESEETIPSWAK DSEEPPPW +EE KE+G  QGFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

XP_004153846.1 uncharacterized protein LOC101218426 isoform X2 [Cucumis sativus]

7.6e-81

85.25

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNPSL CNYGR+DLKRMA GHLRS GRRNNGYRKLTVF+VTEGSAKSSESEETIPSWAK DSEEPPPW +EEGKE G  QGFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSILYAP+LGFFA TGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

XP_016899276.1 PREDICTED: uncharacterized protein LOC103484254 [Cucumis melo]

1.3e-80

85.25

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNPSLACNY R+DLKRMA GHLRSIGRRNNG+RKLTVF+VTEGSAKSSESEETIPSWAK DSEEPPPW +EE KE+G  QGFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

XP_023518065.1 uncharacterized protein LOC111781610 [Cucurbita pepo subsp. pepo]

1.1e-79

83.61

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNP LACNYGR++ +R AFGHLR IGRR+NGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPW REEGKE+G+  GFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSI YAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

XP_038881100.1 uncharacterized protein LOC120072709 isoform X2 [Benincasa hispida]

1.1e-82

86.89

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNPSLACNYGR+D K MAFGHLRSIG RNNGYRKLTVF+VTEGSAKSSESEETIPSWAKPDSEEPPPW REEGKE G  QGFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIJ8 Uncharacterized protein

3.7e-81

85.25

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNPSL CNYGR+DLKRMA GHLRS GRRNNGYRKLTVF+VTEGSAKSSESEETIPSWAK DSEEPPPW +EEGKE G  QGFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSILYAP+LGFFA TGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

A0A1S4DTF9 uncharacterized protein LOC103484254

6.3e-81

85.25

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNPSLACNY R+DLKRMA GHLRSIGRRNNG+RKLTVF+VTEGSAKSSESEETIPSWAK DSEEPPPW +EE KE+G  QGFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

A0A5A7UB84 Uncharacterized protein

6.3e-81

85.25

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNPSLACNY R+DLKRMA GHLRSIGRRNNG+RKLTVF+VTEGSAKSSESEETIPSWAK DSEEPPPW +EE KE+G  QGFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

A0A6J1EDF6 uncharacterized protein LOC111433301

7.7e-79

83.52

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSY NPSLACNYG++D KR+AFG LRSIGRRNNG+R LTVF+ TEGSAKSSESEETIPSWAKPDSEEPPPW REEGKE G +QGFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSI YAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY

A0A6J1KQE7 uncharacterized protein LOC111497315

1.7e-78

83.06

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Query:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA
        MSATLLSYCNP LACNYGR++ +R AFGHLR IGRR NGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPW REE KE+G+  GFQVPFY+YLLA
Subjt:  MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLA

Query:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAA           IGS+FEYVNQKPVFG+INSDSI YAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51510.1 unknown protein

8.5e-46

59.62

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Query:  GHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLIGSIFEYV
        GHL    R  +  R+L V + TEGS KS ESE   PSWA PDS+EPPPW R EG+ S + + F+VPF++YLLAS+ITAIAA           IGS+FEY 
Subjt:  GHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLIGSIFEYV

Query:  NQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        ++ PVFG++ SDSI Y PVLGFFA TGIPT+ FLWFKSVE ANKEA++QD+RDG+L
Subjt:  NQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

Sequences

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CDS sequence

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ATGTCTGCGACGCTGTTGTCTTATTGCAATCCAAGTCTAGCTTGTAATTACGGGAGGGTGGATTTGAAACGCATGGCTTTCGGACATTTACGGTCTATTGGAAGGAGAAA
CAATGGCTATCGCAAGCTTACTGTGTTTTCCGTTACAGAAGGATCTGCAAAATCGAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAACCTGATTCGGAGGAGCCCC
CTCCTTGGACAAGGGAAGAAGGCAAGGAAAGTGGAAACAATCAGGGCTTTCAGGTCCCTTTCTATATTTACTTGCTCGCCTCATCTATCACTGCAATTGCAGCTGTAAGC
TTCCCTCTAACTGGAGACTTGTTTTTGATAGGTTCCATATTCGAGTACGTCAACCAGAAGCCTGTCTTTGGACTTATAAATTCAGACAGCATATTGTACGCTCCAGTGCT
TGGATTTTTCGCATTTACTGGCATTCCTACTGCTGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGT
AG

mRNA sequence

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Protein sequence

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MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVS
FPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

Clc01G26500 (gene) of Watermelon (cordophanus) v2 genome