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Clc01G26640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G26640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSET domain-containing protein
Genome locationClcChr01:36654445..36656156
RNA-Seq ExpressionClc01G26640
SyntenyClc01G26640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134518.1 uncharacterized protein LOC101221511 [Cucumis sativus]2.0e-4588.33Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP+TSN STMDVA  STS+AADAAMDV++DDCS S+ LKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_008439430.1 PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo]1.8e-4690Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP TSN STMDVA ASTS+A DAAMDV+MDDCS SN LKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_022978967.1 uncharacterized protein LOC111478758 [Cucurbita maxima]3.2e-4387.5Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQEAALAAPKLPVRPSP TSN STMDVA+AS ST AD+AMDVEM++   S  LK VGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_023544802.1 uncharacterized protein LOC111804285 [Cucurbita pepo subsp. pepo]1.6e-4286.67Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQ+AALAAPKLPVRPSP TSN STMDVA+AS ST AD+AMDVEM+    S  LK VGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_038877484.1 uncharacterized protein LOC120069761 [Benincasa hispida]2.1e-4793.33Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVR SP TSN STMDVA ASTST AD AMDVEMDDCS SN LKPVGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
TrEMBL top hitse value%identityAlignment
A0A0A0KJ42 Uncharacterized protein9.6e-4688.33Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP+TSN STMDVA  STS+AADAAMDV++DDCS S+ LKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A1S3AZE5 uncharacterized protein LOC1034842418.7e-4790Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP TSN STMDVA ASTS+A DAAMDV+MDDCS SN LKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A5A7UG11 Uncharacterized protein8.7e-4790Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP TSN STMDVA ASTS+A DAAMDV+MDDCS SN LKPVGG+GKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A6J1EC45 uncharacterized protein LOC1114329821.3e-4286.67Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQ+AALAAPKLPVRPSP TSN STMDVA+AS ST AD+AMDVEM+    S  LK VGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A6J1IMI5 uncharacterized protein LOC1114787581.5e-4387.5Show/hide
Query:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK
        MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQEAALAAPKLPVRPSP TSN STMDVA+AS ST AD+AMDVEM++   S  LK VGGIGKKSKRK
Subjt:  MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30880.1 unknown protein1.1e-1451.2Show/hide
Query:  MAKSMRSKREKRLRAIRREMV--DPFYDKKDAAKLAAQEAALAAPKLPVRPSPITS----NTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIG
        MAKSMR KR KRLRAIRRE+V  + F   ++ AK AA EAALAAPKLPVR +P++      T + + A+AST+ A D+  D EMDD   +  LKP   IG
Subjt:  MAKSMRSKREKRLRAIRREMV--DPFYDKKDAAKLAAQEAALAAPKLPVRPSPITS----NTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIG

Query:  KKSKRKFKVGKAKRRGKCKIKRNRH
        KK K+KFK+G   RR K  ++  R+
Subjt:  KKSKRKFKVGKAKRRGKCKIKRNRH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGGGCCATCAGGAGAGAGATGGTTGACCCTTTTTACGATAAGAAAGACGCTGCCAAGCTCGCTGCTCAAGA
GGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCCTCTCCTATCACCTCCAATACTTCTACTATGGACGTCGCAACAGCCTCTACTTCTACCGCCGCCGACGCTGCTA
TGGATGTGGAGATGGATGATTGCAGTGGAAGCAACAGGCTGAAGCCTGTAGGTGGAATTGGCAAGAAATCCAAAAGAAAATTCAAGGTTGGCAAGGCTAAGCGCCGGGGT
AAGTGCAAGATAAAGAGGAATCGCCACATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGGGCCATCAGGAGAGAGATGGTTGACCCTTTTTACGATAAGAAAGACGCTGCCAAGCTCGCTGCTCAAGA
GGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCCTCTCCTATCACCTCCAATACTTCTACTATGGACGTCGCAACAGCCTCTACTTCTACCGCCGCCGACGCTGCTA
TGGATGTGGAGATGGATGATTGCAGTGGAAGCAACAGGCTGAAGCCTGTAGGTGGAATTGGCAAGAAATCCAAAAGAAAATTCAAGGTTGGCAAGGCTAAGCGCCGGGGT
AAGTGCAAGATAAAGAGGAATCGCCACATTTAA
Protein sequenceShow/hide protein sequence
MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRG
KCKIKRNRHI