; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G00210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G00210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionacyl-coenzyme A thioesterase 13
Genome locationClcChr02:232761..234690
RNA-Seq ExpressionClc02G00210
SyntenyClc02G00210
Gene Ontology termsGO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0047617 - acyl-CoA hydrolase activity (molecular function)
InterPro domainsIPR006683 - Thioesterase domain
IPR029069 - HotDog domain superfamily
IPR039298 - Acyl-coenzyme A thioesterase 13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063086.1 putative esterase F42H10.6 [Cucumis melo var. makuwa]1.2e-5879.49Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        M KTKG V      D+D K+ S MDDLPF+F+QFFVMTALRIDL+QPGR+LCSLK      N+NNSMR+GASALLVDCLGHAAVKTL PSSTGVSLE+N+
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        SFFDAA LDEEIEIDS VLRMGKTIAVVN+EFRKKSNGKIIAQGRLTTY+PVSSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

XP_004147338.1 putative esterase F42H10.6 [Cucumis sativus]1.0e-5777.56Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        M  TKG V       +D KL SAMDDLPFRF+QFFVM+ LRIDL+QPGRILCSLKVP RL+N+NNS+R GAS  LVD LGHAAVKTLGP STGVSLE+N+
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        SFFDAA LDEEIEIDS VLR+GKTIAVVN+E RKKSNGKIIAQGRLT Y PVSSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

XP_008460848.1 PREDICTED: putative esterase F42H10.6 [Cucumis melo]3.6e-6382.69Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        M KTKG V      D+D K+ S MDDLPF+F+QFFVMTALRIDL+QPGR+LCSLKVP RLLN+NNSMR+GASALLVDCLGHAAVKTL PSSTGVSLE+N+
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        SFFDAA LDEEIEIDS VLRMGKTIAVVN+EFRKKSNGKIIAQGRLTTY+PVSSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

XP_022158814.1 acyl-coenzyme A thioesterase 13 isoform X1 [Momordica charantia]2.7e-5572.44Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        MEKTK  +EKH D  DDR LASA+DDLP RFY+ FVMT LR+DLI+PGR++CSLKVP RLLNENNS+  GA+A LVDC+G AA+KT G S+TGVS+EIN+
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        S+ DAA LDE+IEI+SKVLRMGKTIAVVN+E RKKSNGKI+AQGR T Y+ +SSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

XP_038901328.1 putative esterase F42H10.6 [Benincasa hispida]1.2e-7190.38Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        MEKTKG VEKH+DSDDDRK+A AMDDLPFRF+QFFV+ ALRIDLIQPGRILCSLKVPDRLLNENNS+REGASALLVDCLGHAAVKTLGPSSTGVSLE+NL
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        SF DAA  DEEIEIDSKVLRMGKTIAVVN+EFRKK NGKIIAQGRLTTY+PVSSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

TrEMBL top hitse value%identityAlignment
A0A0A0LQE5 4HBT domain-containing protein4.9e-5877.56Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        M  TKG V       +D KL SAMDDLPFRF+QFFVM+ LRIDL+QPGRILCSLKVP RL+N+NNS+R GAS  LVD LGHAAVKTLGP STGVSLE+N+
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        SFFDAA LDEEIEIDS VLR+GKTIAVVN+E RKKSNGKIIAQGRLT Y PVSSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

A0A1S3CEJ6 putative esterase F42H10.61.7e-6382.69Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        M KTKG V      D+D K+ S MDDLPF+F+QFFVMTALRIDL+QPGR+LCSLKVP RLLN+NNSMR+GASALLVDCLGHAAVKTL PSSTGVSLE+N+
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        SFFDAA LDEEIEIDS VLRMGKTIAVVN+EFRKKSNGKIIAQGRLTTY+PVSSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

A0A5D3BUX4 Putative esterase F42H10.65.8e-5979.49Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        M KTKG V      D+D K+ S MDDLPF+F+QFFVMTALRIDL+QPGR+LCSLK      N+NNSMR+GASALLVDCLGHAAVKTL PSSTGVSLE+N+
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        SFFDAA LDEEIEIDS VLRMGKTIAVVN+EFRKKSNGKIIAQGRLTTY+PVSSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

A0A6J1E0I3 acyl-coenzyme A thioesterase 13 isoform X11.3e-5572.44Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        MEKTK  +EKH D  DDR LASA+DDLP RFY+ FVMT LR+DLI+PGR++CSLKVP RLLNENNS+  GA+A LVDC+G AA+KT G S+TGVS+EIN+
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        S+ DAA LDE+IEI+SKVLRMGKTIAVVN+E RKKSNGKI+AQGR T Y+ +SSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

A0A6J1ICC5 acyl-coenzyme A thioesterase 131.1e-5471.79Show/hide
Query:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL
        MEKTK  +EKH D DDDRK+AS +D LPFRFY+ FVMT +R+DLI+PGRI+CSLKVP RLLNENNS+  GASA LVDC+G  A+ TLG ++TGVSLEINL
Subjt:  MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINL

Query:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
        S+ DAA LDEEIEID+KVLR+GKTIAV+N+E R+K NGKIIAQGR T Y+ +SSKL
Subjt:  SFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

SwissProt top hitse value%identityAlignment
P34419 Putative esterase F42H10.69.9e-0829.13Show/hide
Query:  IQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQG
        +   +++C + V  + LN   ++  G +A L D +   AV          S+E+ +S+     + + +EI + VL++G+T+A  + EFR+KS+GK+ A+G
Subjt:  IQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQG

Query:  RLT
        + T
Subjt:  RLT

P87304 Putative esterase C31F10.021.3e-0731.03Show/hide
Query:  VMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDA-ACLDEEIEIDSKVLRMGKTIAVVNIEFRK
        V++ ++I    PG + CSLK+    LN   ++  G  A L D  G  A+ + G   +GVS+++N +F  +   L   I + +K  R+G  IA  +++F  
Subjt:  VMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDA-ACLDEEIEIDSKVLRMGKTIAVVNIEFRK

Query:  KSNGKIIAQGRLTTYI
         SN ++ A+GR T ++
Subjt:  KSNGKIIAQGRLTTYI

Q5R833 Acyl-coenzyme A thioesterase 132.7e-1334.62Show/hide
Query:  PGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRL
        PG+++C +KV +   N   ++  G +A LVD +   A+      + GVS+++N+++   A L E+I I + VL+ GKT+A  +++   K+ GK+IAQGR 
Subjt:  PGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRL

Query:  TTYI
        T ++
Subjt:  TTYI

Q9CQR4 Acyl-coenzyme A thioesterase 136.0e-1332.69Show/hide
Query:  PGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRL
        P +++C +KV ++  N+  ++  G +A LVD +   A+      + GVS+++N+++   A + EEI I + +L+ GKT+A  +++   K+ GK+IAQGR 
Subjt:  PGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRL

Query:  TTYI
        T ++
Subjt:  TTYI

Q9NPJ3 Acyl-coenzyme A thioesterase 132.7e-1334.62Show/hide
Query:  PGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRL
        PG+++C +KV +   N   ++  G +A LVD +   A+      + GVS+++N+++   A L E+I I + VL+ GKT+A  +++   K+ GK+IAQGR 
Subjt:  PGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRL

Query:  TTYI
        T ++
Subjt:  TTYI

Arabidopsis top hitse value%identityAlignment
AT1G04290.1 Thioesterase superfamily protein4.2e-3853.33Show/hide
Query:  VEKHSDSDDDRKLASAM-DDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAA
        V+K+ + D+D K    M   LP RF + FV   L++DLI+PGRI+CS+K+P  LLN    +  GA+A LVD +G A + T G S +GVS+EIN+S+ DAA
Subjt:  VEKHSDSDDDRKLASAM-DDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAA

Query:  CLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
         LDEEIEI+SK LR+GK +AVV++E RKK+ GKIIAQGR T Y    S L
Subjt:  CLDEEIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL

AT1G52191.1 Thioesterase superfamily protein3.2e-0929.2Show/hide
Query:  FVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVL-RMGKTIAVVNIEFR
        F++  L++  +  G + C L V   +LNE+ ++   A  +L++ +G  A+ + G S T  S+++N S +  A + EEI+I+++V+ +  + +    IE R
Subjt:  FVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDEEIEIDSKVL-RMGKTIAVVNIEFR

Query:  KKSNGKIIAQGRL
        ++   ++IA GRL
Subjt:  KKSNGKIIAQGRL

AT2G29590.1 Thioesterase superfamily protein9.5e-1437.8Show/hide
Query:  FYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLG-PSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVN
        FY+ F +  +R++ ++PG I CS KVP RL + + ++  GA A LVD +G A V   G P S  VS++++++F   A L EE+EI S++L          
Subjt:  FYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLG-PSSTGVSLEINLSFFDAACLDEEIEIDSKVLRMGKTIAVVN

Query:  IEFRKKSNGKIIAQGRLTTYIPVSSKL
        +  R K  G+IIA+GR + +   +SKL
Subjt:  IEFRKKSNGKIIAQGRLTTYIPVSSKL

AT3G61200.1 Thioesterase superfamily protein3.5e-0827.21Show/hide
Query:  SAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSL-EINLSFFDAACLDEEIEIDSKVLR
        S  D   F  +        R   I  GR+ CS+ V   + N    +  GA A + + +  A VKT+      + + E+++S+  +A +  E+ ++  V+R
Subjt:  SAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSL-EINLSFFDAACLDEEIEIDSKVLR

Query:  MGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL
         G+ ++VV +EF+ K   K+    R T Y    SKL
Subjt:  MGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACAAAGGGATGCGTAGAGAAGCATAGTGATAGTGATGATGATCGGAAGCTTGCTTCCGCCATGGATGACCTTCCTTTCAGATTTTACCAATTCTTCGTCAT
GACTGCTCTTCGCATTGATCTCATTCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGATCGTTTGCTTAACGAGAATAATTCCATGCGCGAAGGAGCCTCCGCGT
TACTCGTCGATTGTCTAGGTCATGCAGCGGTAAAGACTTTGGGCCCTTCCTCCACCGGAGTCTCCCTCGAAATCAACCTCTCCTTCTTCGATGCTGCTTGTCTCGACGAG
GAGATTGAGATTGACAGCAAGGTTTTGCGAATGGGAAAGACCATTGCAGTAGTCAATATTGAATTTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTAAC
CACATACATACCCGTCTCAAGCAAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGACAAAGGGATGCGTAGAGAAGCATAGTGATAGTGATGATGATCGGAAGCTTGCTTCCGCCATGGATGACCTTCCTTTCAGATTTTACCAATTCTTCGTCAT
GACTGCTCTTCGCATTGATCTCATTCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGATCGTTTGCTTAACGAGAATAATTCCATGCGCGAAGGAGCCTCCGCGT
TACTCGTCGATTGTCTAGGTCATGCAGCGGTAAAGACTTTGGGCCCTTCCTCCACCGGAGTCTCCCTCGAAATCAACCTCTCCTTCTTCGATGCTGCTTGTCTCGACGAG
GAGATTGAGATTGACAGCAAGGTTTTGCGAATGGGAAAGACCATTGCAGTAGTCAATATTGAATTTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTAAC
CACATACATACCCGTCTCAAGCAAGTTGTAG
Protein sequenceShow/hide protein sequence
MEKTKGCVEKHSDSDDDRKLASAMDDLPFRFYQFFVMTALRIDLIQPGRILCSLKVPDRLLNENNSMREGASALLVDCLGHAAVKTLGPSSTGVSLEINLSFFDAACLDE
EIEIDSKVLRMGKTIAVVNIEFRKKSNGKIIAQGRLTTYIPVSSKL