CuGenDBv2

Gene ID	Clc02G00280
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Eukaryotic translation initiation factor 6
Genome location	ClcChr02:305512..308634
RNA-Seq Expression	Clc02G00280
Synteny	Clc02G00280
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022147757.1 eukaryotic translation initiation factor 6-2 [Momordica charantia]

3.5e-129

97.14

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

1.5e-129

97.14

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

5.3e-130

97.55

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_038880643.1 eukaryotic translation initiation factor 6-2-like [Benincasa hispida]

1.1e-130

98.78

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FETELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

5.7e-132

99.59

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

1.7e-129

97.14

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1F0A8 Eukaryotic translation initiation factor 6

7.5e-130

97.14

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1G8F7 Eukaryotic translation initiation factor 6

8.3e-129

96.33

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1I8L9 Eukaryotic translation initiation factor 6

2.6e-130

97.55

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1L2F0 Eukaryotic translation initiation factor 6

8.3e-129

96.33

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

1.4e-101

74.9

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

1.4e-101

75.31

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

4.1e-101

74.49

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

8.6e-123

87.76

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYS FE+EL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

Q9TU47 Eukaryotic translation initiation factor 6

4.9e-102

75.31

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RN LPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

1.3e-94

68.42

Show/hide

Query:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ
        MATRL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +E++L GVIP+V TSI G+  IG LC GNKNGLL+ HT TDQELQHLR+SLPD+VVVQRI+
Subjt:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ

Query:  ERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLT
        E + ALGN IACND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T+VE++ EL+ L+QVPLVAGTVNRGS+VI+AGLT
Subjt:  ERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLT

Query:  ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
         NDWTAFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSLID+YV
Subjt:  ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

AT3G55620.1 Translation initiation factor IF6

6.1e-124

87.76

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Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYS FE+EL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

Sequences

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CDS sequence

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ATGGCCACTAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTAC
GTTCGAAACTGAATTAGGTGGTGTCATTCCGGTCGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCAC
ACACCACTACTGACCAAGAACTTCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACCATTGCTTGT
AATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTCCT
TGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTGTTGAAGATCTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTG
GAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGATTGGACCGCGTTTTGTGGTTCAGACACCACGGCCACCGAGTTATCGGTCATCGAGAGC
GTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACGTATGA

mRNA sequence

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GCCGCATCCAACTTCCTTCACTTTGTAGCGGTTGCATTGCAAAGGGAACTTGAATTTATCTTCGAGGGAGCTTCTTCTTGATTTTTCAAAGGTTTATCCTCTGCTTAGTT
ATGGCCACTAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTAC
GTTCGAAACTGAATTAGGTGGTGTCATTCCGGTCGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCAC
ACACCACTACTGACCAAGAACTTCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACCATTGCTTGT
AATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTCCT
TGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTGTTGAAGATCTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTG
GAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGATTGGACCGCGTTTTGTGGTTCAGACACCACGGCCACCGAGTTATCGGTCATCGAGAGC
GTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACGTATGAGGAGTCACTTCTACTATACTATACTTAAGATC
T

Protein sequence

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MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIAC
NDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIES
VFKLREAQPSSIVEEMRKSLIDSYV

Clc02G00280 (gene) of Watermelon (cordophanus) v2 genome