CuGenDBv2

Gene ID	Clc02G00390
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Genome location	ClcChr02:405274..405726
RNA-Seq Expression	Clc02G00390
Synteny	Clc02G00390
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040748.1 hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa]

2.7e-60

82.78

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFWLLTFFYRVISRACG+RVSLG G +VG NN N NNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NA-SAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
        NA SAESP+ DVG+R NE+++N DQR+SNSSSNNS+ SRESEMPLAITM S
Subjt:  NA-SAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

KAE8651991.1 hypothetical protein Csa_016945 [Cucumis sativus]

2.6e-50

73.33

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFWLLTFFYRV+SRACGFRVSLGIG +               
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
                 DVG+R NE+++N DQR SNSSSNNS+ SRESEMPLAITM S
Subjt:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

XP_008460874.1 PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]

4.6e-60

82.78

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFWLLTFFYRVISRACG+RVSLG G +VG NN N NNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NA-SAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
        NA SAESP+ DVG+R NE+++N DQR+SNSSSNNS+ SRESEMPLAITM S
Subjt:  NA-SAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

XP_011649431.1 putative uncharacterized protein DDB_G0284715 [Cucumis sativus]

2.2e-62

85.33

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFWLLTFFYRV+SRACGFRVSLGIG +V +NNANANNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
         +SAES Q DVG+R NE+++N DQR SNSSSNNS+ SRESEMPLAITM S
Subjt:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

XP_038900833.1 uncharacterized protein LOC120087896 [Benincasa hispida]

1.0e-67

92.72

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVS+GIGV+VGA+NANANNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDVGDRANEE-DDNGDQRRSNSSSNNSVASRESEMPLAITMGS
        NASAESP+ D GDR +EE DDNGDQRRSNSSSNNS+ASRESEMPLAITMGS
Subjt:  NASAESPQCDVGDRANEE-DDNGDQRRSNSSSNNSVASRESEMPLAITMGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJX6 Uncharacterized protein

1.1e-62

85.33

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFWLLTFFYRV+SRACGFRVSLGIG +V +NNANANNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
         +SAES Q DVG+R NE+++N DQR SNSSSNNS+ SRESEMPLAITM S
Subjt:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

A0A1S3CDW9 Uncharacterized protein

2.2e-60

82.78

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFWLLTFFYRVISRACG+RVSLG G +VG NN N NNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NA-SAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
        NA SAESP+ DVG+R NE+++N DQR+SNSSSNNS+ SRESEMPLAITM S
Subjt:  NA-SAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

A0A5A7TCV0 Uncharacterized protein

1.3e-60

82.78

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFFWLLTFFYRVISRACG+RVSLG G +VG NN N NNNNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NA-SAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
        NA SAESP+ DVG+R NE+++N DQR+SNSSSNNS+ SRESEMPLAITM S
Subjt:  NA-SAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

A0A6J1EV39 uncharacterized protein LOC111438319

7.5e-48

70.67

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPETE+TAWLPVAGLSLVCLPWFFW+LTFFYRVISRACGFRVSL +     AN+ N ++NNNNN
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
        N+S ESP+CD   +A E+ +N DQRRSN SSNNS+ SRESE+P AI+MGS
Subjt:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

A0A6J1G7P7 uncharacterized protein LOC111451588

1.2e-45

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        MSLV+PS GR  IWIVT  LF S++SGGGCLLMY+ LPETE TAWLPVAGLSLVCLPWFFW LTF YR+ISRACGFRVSLG+ V   A  A  NN N +N
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
        N   ESPQ D G +AN+ED  G+QR+SNSSSN+S ASRESE PLAITMGS
Subjt:  NASAESPQCDVGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30770.1 Putative membrane lipoprotein

1.7e-23

44.79

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Query:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN
        M + +P AG+AFI ++T FLF SI  GGGCL+ Y ILP      WL   G+  VCLPWFFW+LTF YR++SR  GFR+ +G     G NN NAN      
Subjt:  MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNN

Query:  N-----ASAESPQCD--------VGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS
        +      S ESP  D         G      + N  ++R ++SSN+++AS ESEMPLAI+M S
Subjt:  N-----ASAESPQCD--------VGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

Sequences

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CDS sequence

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ATGTCTTTGGTGAATCCCTCAGCTGGACGTGCATTCATATGGATCGTCACTTGCTTTCTCTTCTTTTCCATTGTCAGCGGCGGTGGTTGTCTTTTGATGTACATGATCCT
CCCTGAGACCGAAACTACCGCTTGGCTACCCGTCGCCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTCTTAACTTTCTTCTATAGAGTCATCTCACGTGCAT
GTGGTTTTAGAGTCTCCCTTGGTATTGGTGTGGAGGTAGGTGCAAATAACGCAAATGCCAATAATAATAATAATAACAATAATGCATCTGCTGAATCCCCTCAATGCGAT
GTGGGAGATCGAGCTAATGAGGAGGACGACAATGGTGATCAAAGGCGAAGCAATTCGTCATCCAACAACTCAGTAGCATCTCGTGAGAGTGAAATGCCATTAGCCATAAC
AATGGGGTCGTAA

mRNA sequence

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Protein sequence

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MSLVNPSAGRAFIWIVTCFLFFSIVSGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSLGIGVEVGANNANANNNNNNNNASAESPQCD
VGDRANEEDDNGDQRRSNSSSNNSVASRESEMPLAITMGS

Clc02G00390 (gene) of Watermelon (cordophanus) v2 genome