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Clc02G00400 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G00400
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein
Genome locationClcChr02:406965..407282
RNA-Seq ExpressionClc02G00400
SyntenyClc02G00400
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605336.1 hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3485.42Show/hide
Query:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV
        MET ++K ED L+  +SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLRQRYEAEQ SAKQSA SV
Subjt:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV
XP_004147347.1 uncharacterized protein LOC101213780 [Cucumis sativus]3.9e-3778.1Show/hide
Query:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA
        ++ EEE GEDKL+G +SSSGF GKLE KYREIKENAE YPYVWGSYIVVYGG  LW GYRWRKLRKTEDRVR+LQEKLR+ YEA++SS KQSA SVDK +
Subjt:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA

Query:  LPSKQ
         PSKQ
Subjt:  LPSKQ
XP_008460875.1 PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo]3.9e-3780Show/hide
Query:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA
        ++ EEEKG DKL+G SSSS F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKLRKTEDRVR+LQEKLRQ YEAEQSS KQSA SVDKN+
Subjt:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA

Query:  LPSKQ
         PSKQ
Subjt:  LPSKQ
XP_023007268.1 uncharacterized protein LOC111499806 [Cucurbita maxima]1.8e-3486.96Show/hide
Query:  EEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV
        ++K ED L+  +SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQ SAKQSA SV
Subjt:  EEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV
XP_038900834.1 uncharacterized protein LOC120087898 [Benincasa hispida]9.8e-4188.57Show/hide
Query:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA
        +E EEEK EDKL G +SS GFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSA SV KN 
Subjt:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA

Query:  LPSKQ
          SKQ
Subjt:  LPSKQ
TrEMBL top hitse value%identityAlignment
A0A1S3CCY7 uncharacterized protein LOC1034996201.9e-3780Show/hide
Query:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA
        ++ EEEKG DKL+G SSSS F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKLRKTEDRVR+LQEKLRQ YEAEQSS KQSA SVDKN+
Subjt:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA

Query:  LPSKQ
         PSKQ
Subjt:  LPSKQ
A0A5D3BSB4 Uncharacterized protein1.9e-3780Show/hide
Query:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA
        ++ EEEKG DKL+G SSSS F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKLRKTEDRVR+LQEKLRQ YEAEQSS KQSA SVDKN+
Subjt:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA

Query:  LPSKQ
         PSKQ
Subjt:  LPSKQ
A0A6J1D6P5 uncharacterized protein LOC1110174445.3e-3274.29Show/hide
Query:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA
        MET  +K ED+++  ++SSGF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLR+RYEAEQS++  S  SV+K+ 
Subjt:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNA

Query:  LPSKQ
           KQ
Subjt:  LPSKQ
A0A6J1G8F0 uncharacterized protein LOC1114518211.1e-3485.42Show/hide
Query:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV
        MET ++K ED L+  +SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLRQRYEAEQ SAKQSA SV
Subjt:  METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV
A0A6J1L783 uncharacterized protein LOC1114998068.7e-3586.96Show/hide
Query:  EEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV
        ++K ED L+  +SSSGFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQ SAKQSA SV
Subjt:  EEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09270.1 unknown protein5.2e-2455.96Show/hide
Query:  METEEEKGEDKLSGGSS-SSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSATSVD
        M TE    ED+ S  S  + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+TEDRVR LQ KLR+  E EQ+  +A +SA SVD
Subjt:  METEEEKGEDKLSGGSS-SSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSATSVD

Query:  K-NALPSKQ
        K +++P K+
Subjt:  K-NALPSKQ
AT5G09270.2 unknown protein5.2e-2455.96Show/hide
Query:  METEEEKGEDKLSGGSS-SSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSATSVD
        M TE    ED+ S  S  + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+TEDRVR LQ KLR+  E EQ+  +A +SA SVD
Subjt:  METEEEKGEDKLSGGSS-SSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQS--SAKQSATSVD

Query:  K-NALPSKQ
        K +++P K+
Subjt:  K-NALPSKQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTGAGGAGGAAAAGGGAGAAGATAAGTTAAGTGGTGGTAGTAGTTCGAGTGGATTTTTGGGTAAATTGGAAGAAAAGTACAGAGAAATCAAAGAGAATGCAGA
AACATATCCTTATGTATGGGGCTCATACATTGTTGTCTATGGCGGATTCGCTCTTTGGACTGGCTATAGATGGAGGAAGCTTCGGAAGACGGAGGACAGAGTACGCGTTT
TACAGGAGAAGCTTCGACAGCGTTACGAAGCAGAACAATCCTCCGCCAAACAATCAGCAACTTCGGTTGATAAAAATGCACTTCCTTCCAAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTGAGGAGGAAAAGGGAGAAGATAAGTTAAGTGGTGGTAGTAGTTCGAGTGGATTTTTGGGTAAATTGGAAGAAAAGTACAGAGAAATCAAAGAGAATGCAGA
AACATATCCTTATGTATGGGGCTCATACATTGTTGTCTATGGCGGATTCGCTCTTTGGACTGGCTATAGATGGAGGAAGCTTCGGAAGACGGAGGACAGAGTACGCGTTT
TACAGGAGAAGCTTCGACAGCGTTACGAAGCAGAACAATCCTCCGCCAAACAATCAGCAACTTCGGTTGATAAAAATGCACTTCCTTCCAAGCAGTAG
Protein sequenceShow/hide protein sequence
METEEEKGEDKLSGGSSSSGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSATSVDKNALPSKQ