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Clc02G00530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G00530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:517687..518203
RNA-Seq ExpressionClc02G00530
SyntenyClc02G00530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
J3NFD9 Uncharacterized protein8.4e-0537.89Show/hide
Query:  FDILHTYDRASLSSRPPKNNGVALFDATRFKPF-KPRWTRIPTEQGALANTFWLTNLNAGFVASIPPSTV-LLMEWDDYEGNRLSSAKLHMSSCI
        FD+      AS SS PP N       A     F +PR TR+PTE GA  +TFW T+ +  + AS+ PS + LL           SSA++ MS C+
Subjt:  FDILHTYDRASLSSRPPKNNGVALFDATRFKPF-KPRWTRIPTEQGALANTFWLTNLNAGFVASIPPSTV-LLMEWDDYEGNRLSSAKLHMSSCI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGTTGTCTCCTCGCCGTTGTTCAGCACACTCTCCGTGTAATGATGAATCGCATTACGGTTAAGCTCACTCCTAGATATTTTGACATTCTCCATACGTATGATAG
GGCTTCTCTATCATCTCGTCCACCAAAGAACAACGGAGTTGCCTTGTTTGATGCGACTCGATTCAAGCCGTTTAAGCCTCGATGGACTAGGATTCCAACGGAGCAAGGGG
CATTGGCTAACACATTTTGGTTAACCAATCTAAATGCTGGATTTGTGGCTTCCATTCCTCCATCGACTGTTTTGCTTATGGAATGGGATGATTATGAAGGCAACCGTTTA
TCCTCGGCTAAATTGCATATGTCTTCGTGCATTGTGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGTTGTCTCCTCGCCGTTGTTCAGCACACTCTCCGTGTAATGATGAATCGCATTACGGTTAAGCTCACTCCTAGATATTTTGACATTCTCCATACGTATGATAG
GGCTTCTCTATCATCTCGTCCACCAAAGAACAACGGAGTTGCCTTGTTTGATGCGACTCGATTCAAGCCGTTTAAGCCTCGATGGACTAGGATTCCAACGGAGCAAGGGG
CATTGGCTAACACATTTTGGTTAACCAATCTAAATGCTGGATTTGTGGCTTCCATTCCTCCATCGACTGTTTTGCTTATGGAATGGGATGATTATGAAGGCAACCGTTTA
TCCTCGGCTAAATTGCATATGTCTTCGTGCATTGTGGAGTAA
Protein sequenceShow/hide protein sequence
MLGCLLAVVQHTLRVMMNRITVKLTPRYFDILHTYDRASLSSRPPKNNGVALFDATRFKPFKPRWTRIPTEQGALANTFWLTNLNAGFVASIPPSTVLLMEWDDYEGNRL
SSAKLHMSSCIVE