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Clc02G00570 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G00570
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Genome locationClcChr02:561823..562527
RNA-Seq ExpressionClc02G00570
SyntenyClc02G00570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605318.1 hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia]6.5e-3383.33Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECKAIED+DS M+N CHEEEVDEL  LY+L DIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
XP_008460897.1 PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo]4.8e-3688.04Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI--EDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
        MGSIDRKSSIENEPRTLKM+QIQFAREAALYV+NTTTIEEAMKIFTEGL+PVECKAI  EDKDSIM+NW H+EE+DELQP  QLRDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI--EDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
XP_011649401.1 uncharacterized protein LOC105434623 [Cucumis sativus]6.3e-3689.13Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI-EDKDSIMENWCHEEEVDE-LQPLYQLRDIVSAPF
        MGSIDRKSSIENEPRTLKMHQIQFAREAALYV+NT TIEEAMKIFTEGLQPVECKAI EDKDSI++NW H+EE+DE LQP YQLRDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI-EDKDSIMENWCHEEEVDE-LQPLYQLRDIVSAPF
XP_022947894.1 uncharacterized protein LOC111451648 [Cucurbita moschata]7.2e-3281.11Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECK IED+DS M+N CHEEEVDEL   Y+L DIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
XP_038902606.1 uncharacterized protein LOC120089256 [Benincasa hispida]4.8e-3690Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
        MG+IDRKSSIENEPRTL+MHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI+DKDSIM N+ HEEE DELQ LYQ RDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
TrEMBL top hitse value%identityAlignment
A0A0A0LQ89 Uncharacterized protein3.0e-3689.13Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI-EDKDSIMENWCHEEEVDE-LQPLYQLRDIVSAPF
        MGSIDRKSSIENEPRTLKMHQIQFAREAALYV+NT TIEEAMKIFTEGLQPVECKAI EDKDSI++NW H+EE+DE LQP YQLRDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI-EDKDSIMENWCHEEEVDE-LQPLYQLRDIVSAPF
A0A1R3GDT9 Uncharacterized protein1.2e-1656.52Show/hide
Query:  SIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEE----EVDELQPLYQLRDIVSAPF
        +IDRKSSIE+EPRTL  HQIQ AREAA+YV++T +IEEAM IFTEGL+PV   A  D          +E    E++E Q L++ RD+VSAPF
Subjt:  SIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEE----EVDELQPLYQLRDIVSAPF
A0A1S3CDH2 uncharacterized protein LOC1034996382.3e-3688.04Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI--EDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
        MGSIDRKSSIENEPRTLKM+QIQFAREAALYV+NTTTIEEAMKIFTEGL+PVECKAI  EDKDSIM+NW H+EE+DELQP  QLRDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAI--EDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
A0A6J1DBC1 uncharacterized protein LOC1110189153.4e-2770.65Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDK--DSIMENWCHEEEVDELQPLYQLRDIVSAPF
        MG IDRKSSIENEPRTLKMHQIQFAREAALY++NTTTI+EAM+IFTEGL+ VECKA  D+  +   +   +EEE+ +L+PLY+ RDIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDK--DSIMENWCHEEEVDELQPLYQLRDIVSAPF
A0A6J1G887 uncharacterized protein LOC1114516483.5e-3281.11Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECK IED+DS M+N CHEEEVDEL   Y+L DIVSAPF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33467.1 unknown protein1.1e-0939.58Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQL------RDIVSAPF
        M  ++R+SSIE EP TL + Q++ ARE ALYV+ T T+EEAM IFT+       +A E++     N   EE+ D+ +    +       DI +APF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQL------RDIVSAPF
AT4G33467.2 unknown protein2.4e-0942.27Show/hide
Query:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFT----EGLQPVE---CKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF
        M  ++R+SSIE EP TL + Q++ ARE ALYV+ T T+EEAM IFT    EGL+  E    + I  KD   ++   +E +  + P     DI +APF
Subjt:  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFT----EGLQPVE---CKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCATTGATAGAAAATCATCTATTGAAAATGAGCCAAGGACTCTCAAAATGCATCAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTGATAAACACAACCAC
CATAGAAGAAGCAATGAAGATTTTCACAGAGGGATTACAACCAGTGGAATGTAAAGCAATTGAAGATAAAGATTCAATAATGGAAAATTGGTGCCATGAAGAAGAAGTTG
ATGAGTTACAACCTCTGTATCAACTTAGAGACATTGTCTCTGCCCCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
AAAGCACCCTGTTTTTAATAAAAATTAAAAAAACAAATAAAAAATAAAACAGTTAGAAGCCATTTTCGACCCGTCGTTTCTAGAGCTGTGTGTTGGGACGACTTGTCGTA
GAAGAAGTTTGAAGAAGAAGGATAAGGTTTGAAAGTTTGAAGGAATAATAATGGGAAGCATTGATAGAAAATCATCTATTGAAAATGAGCCAAGGACTCTCAAAATGCAT
CAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTGATAAACACAACCACCATAGAAGAAGCAATGAAGATTTTCACAGAGGGATTACAACCAGTGGAATGTAAAGCAAT
TGAAGATAAAGATTCAATAATGGAAAATTGGTGCCATGAAGAAGAAGTTGATGAGTTACAACCTCTGTATCAACTTAGAGACATTGTCTCTGCCCCTTTTTAG
Protein sequenceShow/hide protein sequence
MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF