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Clc02G00715 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G00715
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein IDA-LIKE 2
Genome locationClcChr02:641670..645981
RNA-Seq ExpressionClc02G00715
SyntenyClc02G00715
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KMT09205.1 hypothetical protein BVRB_6g133070 [Beta vulgaris subsp. vulgaris]4.6e-0555.1Show/hide
Query:  SHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        +H    N  P      HF GFFPKR  P+PSS PSRKHND+G Q W SP
Subjt:  SHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
TKY73857.1 IDA 2 [Spatholobus suberectus]6.0e-0565Show/hide
Query:  PTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        P S    HF+GFFP+R IPIP S+PS+KHNDIG Q+W SP
Subjt:  PTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
XP_019092499.1 PREDICTED: protein IDA-LIKE 4 [Camelina sativa]2.1e-0551.85Show/hide
Query:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        +SSV     N+++N  ++ + HF GFFP R  P+P+S PSRKHNDIG Q W SP
Subjt:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
XP_019096306.1 PREDICTED: protein IDA-LIKE 4-like [Camelina sativa]4.6e-0550Show/hide
Query:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        ++SV     N+++N  ++ + HF GFFP R  P+P+S PSRKHNDIG Q W SP
Subjt:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
XP_019096717.1 PREDICTED: protein IDA-LIKE 4-like [Camelina sativa]7.8e-0550Show/hide
Query:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        +SSV     N++++  ++ + HF GFFP R  P+P+S PSRKHNDIG Q W SP
Subjt:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
TrEMBL top hitse value%identityAlignment
A0A0A0LK15 Uncharacterized protein6.9e-1577.36Show/hide
Query:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPS
        +S  SS+FS + NN    TKPHFYGFFPKR IPIPSSTPSRKHNDIGFQTWPS
Subjt:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPS
A0A151TLA3 Protein IDA-LIKE 26.4e-0565Show/hide
Query:  PTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        P S    HF+GF PKR +PIP STPSRKHNDIG ++W SP
Subjt:  PTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
A0A165XM75 Uncharacterized protein6.4e-0548.28Show/hide
Query:  SSVSSHFSNHNNNPTSLTKPH-----FYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        S ++SH  N+ ++ +S   P      F GF P+R IP+P+S+PSRKHNDIG Q+W SP
Subjt:  SSVSSHFSNHNNNPTSLTKPH-----FYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
A0A7C8Z397 Uncharacterized protein2.2e-0557.78Show/hide
Query:  HNNNPTSLTKPHFY-GFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        H    TS    HF+ GFFPKR  P+P+S PSRKHND+G Q W SP
Subjt:  HNNNPTSLTKPHFY-GFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
A0A7C8Z3J5 Uncharacterized protein2.2e-0557.78Show/hide
Query:  HNNNPTSLTKPHFY-GFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        H    TS    HF+ GFFPKR  P+P+S PSRKHND+G Q W SP
Subjt:  HNNNPTSLTKPHFY-GFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
SwissProt top hitse value%identityAlignment
Q6DUW6 Protein IDA-LIKE 41.3e-0546.3Show/hide
Query:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        +SSV     N++++  ++ + HF GF P R +P+P+S PSRKHNDIG Q   SP
Subjt:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
Q6DUW9 Protein IDA-LIKE 23.1e-0451.06Show/hide
Query:  SSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTW
        S     HN+  +S TK  F GF P R  P+P+S PSRKHNDIG  +W
Subjt:  SSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTW
Arabidopsis top hitse value%identityAlignment
AT3G18715.1 inflorescence deficient in abscission (IDA)-like 48.9e-0746.3Show/hide
Query:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
        +SSV     N++++  ++ + HF GF P R +P+P+S PSRKHNDIG Q   SP
Subjt:  ASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTWPSP
AT5G64667.1 inflorescence deficient in abscission (IDA)-like 22.2e-0551.06Show/hide
Query:  SSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTW
        S     HN+  +S TK  F GF P R  P+P+S PSRKHNDIG  +W
Subjt:  SSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSRKHNDIGFQTW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGCAGTAGTAGAGAGGGAGTTAAGAGGAGGAGAAAGAAAATTGAGTGTGGAGATGAACCAGCGACCGATAATGGCAGCGATGGAGAGGGAGAAGGGAGAAGA
AAGAAATCAAATATGGTGGCAAATTTGGAGTTGGCCATTGGCAGTGGTTGCCAAAGTTGGCCTCGTTGGAGGTGGTCACGTGAAGTTGGTCATCGGAGCTTCTTCTGTTT
CTTCACATTTCTCCAATCACAACAACAACCCAACATCACTAACGAAACCCCATTTCTATGGCTTCTTTCCCAAAAGGATAATTCCAATCCCTTCTTCAACTCCTTCAAGA
AAACACAATGATATTGGCTTCCAAACCTGGCCATCCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTGCAGTAGTAGAGAGGGAGTTAAGAGGAGGAGAAAGAAAATTGAGTGTGGAGATGAACCAGCGACCGATAATGGCAGCGATGGAGAGGGAGAAGGGAGAAGA
AAGAAATCAAATATGGTGGCAAATTTGGAGTTGGCCATTGGCAGTGGTTGCCAAAGTTGGCCTCGTTGGAGGTGGTCACGTGAAGTTGGTCATCGGAGCTTCTTCTGTTT
CTTCACATTTCTCCAATCACAACAACAACCCAACATCACTAACGAAACCCCATTTCTATGGCTTCTTTCCCAAAAGGATAATTCCAATCCCTTCTTCAACTCCTTCAAGA
AAACACAATGATATTGGCTTCCAAACCTGGCCATCCCCTTAA
Protein sequenceShow/hide protein sequence
MEFAVVERELRGGERKLSVEMNQRPIMAAMEREKGEERNQIWWQIWSWPLAVVAKVGLVGGGHVKLVIGASSVSSHFSNHNNNPTSLTKPHFYGFFPKRIIPIPSSTPSR
KHNDIGFQTWPSP