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Clc02G00990 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G00990
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRoot meristem growth factor 9-like protein
Genome locationClcChr02:1012671..1014082
RNA-Seq ExpressionClc02G00990
SyntenyClc02G00990
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR039337 - Protein GOLVEN 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045905.1 Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa]6.9e-1867.78Show/hide
Query:  MAMLPCKRI-VVFVLVLIFLCCFSNMTIAARNLGVPQIKSD-THNQKV--INDDL-KVH---DEEH-FSSTDDLGAMDYTPASKKPPIHN
        MAMLPCKRI ++F+L+LI L CFSN  IAAR++GV ++K++ +  +KV  INDD+ KVH   DEEH FSSTDDLGAMDYTPASKKPPIHN
Subjt:  MAMLPCKRI-VVFVLVLIFLCCFSNMTIAARNLGVPQIKSD-THNQKV--INDDL-KVH---DEEH-FSSTDDLGAMDYTPASKKPPIHN

KAB2597277.1 hypothetical protein D8674_000197 [Pyrus ussuriensis x Pyrus communis]3.6e-0648.15Show/hide
Query:  MAMLPCKRIVVFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN
        MA LPCK +VV   V  FL CF ++T   R+LGV   ++    QK  +D   V  +E    ++DL AMDYTPA KKPPIHN
Subjt:  MAMLPCKRIVVFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN

KAG6571377.1 hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sororia]9.6e-2077.46Show/hide
Query:  VFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN
        V VLVL+ LC FSN  IA R+LGVPQIK D H  K  NDDL VH+EEHFSSTDDLGAMDYTPASKKPPIHN
Subjt:  VFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN

KAG6605281.1 hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1565.85Show/hide
Query:  MLPCKRIVVFVLV-LIFLCCFSNMTIAARNL--GVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN
        M PCKR+V+ +LV L+ L CFSN  I AR+L  GVPQIK D H+ KV + DL V DEEHF ST DL AMDYT ASKKPPIHN
Subjt:  MLPCKRIVVFVLV-LIFLCCFSNMTIAARNL--GVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN

KGN62102.1 hypothetical protein Csa_006036 [Cucumis sativus]3.0e-2170.45Show/hide
Query:  MAMLPCKRIV-VFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVIN---DDLKVH--DEEH-FSSTDDLGAMDYTPASKKPPIHN
        MAMLPCKRI+ +FVL+L+ LCCFSN  IAAR++GV ++K+++ N+KVIN   D  KVH  DEEH FSSTDDLGAMDYTPASKKPPIHN
Subjt:  MAMLPCKRIV-VFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVIN---DDLKVH--DEEH-FSSTDDLGAMDYTPASKKPPIHN

TrEMBL top hitse value%identityAlignment
A0A0A0LMV6 Uncharacterized protein1.5e-2170.45Show/hide
Query:  MAMLPCKRIV-VFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVIN---DDLKVH--DEEH-FSSTDDLGAMDYTPASKKPPIHN
        MAMLPCKRI+ +FVL+L+ LCCFSN  IAAR++GV ++K+++ N+KVIN   D  KVH  DEEH FSSTDDLGAMDYTPASKKPPIHN
Subjt:  MAMLPCKRIV-VFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVIN---DDLKVH--DEEH-FSSTDDLGAMDYTPASKKPPIHN

A0A1S2YFC4 uncharacterized protein LOC1015068753.8e-0645.07Show/hide
Query:  FVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDL-KVHDEEHFSSTDDLGAMDYTPASKKPPIHN
        F+LV+ FL CF +    AR L      +DT N K + D++ K  +E+H +  DD+ +MDYTPA +KPPIHN
Subjt:  FVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDL-KVHDEEHFSSTDDLGAMDYTPASKKPPIHN

A0A5A7TWX6 Root meristem growth factor 9-like protein3.3e-1867.78Show/hide
Query:  MAMLPCKRI-VVFVLVLIFLCCFSNMTIAARNLGVPQIKSD-THNQKV--INDDL-KVH---DEEH-FSSTDDLGAMDYTPASKKPPIHN
        MAMLPCKRI ++F+L+LI L CFSN  IAAR++GV ++K++ +  +KV  INDD+ KVH   DEEH FSSTDDLGAMDYTPASKKPPIHN
Subjt:  MAMLPCKRI-VVFVLVLIFLCCFSNMTIAARNLGVPQIKSD-THNQKV--INDDL-KVH---DEEH-FSSTDDLGAMDYTPASKKPPIHN

A0A5N5F2S8 Uncharacterized protein1.7e-0648.15Show/hide
Query:  MAMLPCKRIVVFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN
        MA LPCK +VV   V  FL CF ++T   R+LGV   ++    QK  +D   V  +E    ++DL AMDYTPA KKPPIHN
Subjt:  MAMLPCKRIVVFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN

A0A6J5WGE6 Uncharacterized protein8.6e-0644.83Show/hide
Query:  MAMLPCKRIVVFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKV--INDDLKVHDEEHF----SSTDDLGAMDYTPASKKPPIHN
        MA +P K +   +LV   L CF ++T   R+LGV    SD  +QK   ++D  K  +E+H       ++DL AMDYTPASKKPPIHN
Subjt:  MAMLPCKRIVVFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKV--INDDLKVHDEEHF----SSTDDLGAMDYTPASKKPPIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGCTTCCATGCAAACGCATCGTCGTCTTCGTCCTCGTCCTCATCTTTCTTTGTTGTTTCTCAAACATGACTATAGCTGCAAGAAATTTGGGAGTACCTCAGAT
TAAAAGTGATACTCATAATCAAAAAGTAATTAATGATGATCTTAAAGTTCATGATGAAGAACATTTCTCAAGCACTGATGATTTGGGTGCAATGGATTATACTCCAGCCT
CCAAGAAGCCTCCAATTCACAACTAG
mRNA sequenceShow/hide mRNA sequence
AAAAACAAAGCTTCCTTTTTTTGTCATCACAATAACAAATCAAACACAAAGCACAAAAGTCCCTCCAATGGCTATGCTTCCATGCAAACGCATCGTCGTCTTCGTCCTCG
TCCTCATCTTTCTTTGTTGTTTCTCAAACATGACTATAGCTGCAAGAAATTTGGGAGTACCTCAGATTAAAAGTGATACTCATAATCAAAAAGTAATTAATGATGATCTT
AAAGTTCATGATGAAGAACATTTCTCAAGCACTGATGATTTGGGTGCAATGGATTATACTCCAGCCTCCAAGAAGCCTCCAATTCACAACTAGGATTTTATTTGTACAAT
ACCCAAAAATCCAAACACTTCTATTTCTTTATTATTAATTTGTATGATATTTTTACATCTGCCTTTCTCTTTTTATTTTTGGTTAAAATGAAGCTTCGAGTAATGAATTA
TACAGAAATGGAAGATATGAGCAAAATGTGAAATAATGGGTGGTTTCATACATGTTCAACTGTTTC
Protein sequenceShow/hide protein sequence
MAMLPCKRIVVFVLVLIFLCCFSNMTIAARNLGVPQIKSDTHNQKVINDDLKVHDEEHFSSTDDLGAMDYTPASKKPPIHN