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Clc02G01220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G01220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationClcChr02:1266078..1267001
RNA-Seq ExpressionClc02G01220
SyntenyClc02G01220
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572355.1 Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4376.67Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQE
        MK STWFSI+FIAFLLFP PISS+RIS QNSRH HHRK+A             E+ A+GRKG +TVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQE
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQE

Query:  AETCPMTYRCMCNNKSYPVP
        AETCPM YRCMCNNKSYP+P
Subjt:  AETCPMTYRCMCNNKSYPVP

XP_004136818.1 protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus]7.3e-4885.6Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAM-VVKEKVA----IGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVC
        MKP T FSILFIAFLLF  PISSRRISQQNSRHGHHRK A A +SGKAAM VVKEK A    +GRKG +TVEVAGSSLPDCSHACGSCSPCRLVMISFVC
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAM-VVKEKVA----IGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVC

Query:  ASLQEAETCPMTYRCMCNNKSYPVP
        ASLQEAETCPM YRCMCNNKSYPVP
Subjt:  ASLQEAETCPMTYRCMCNNKSYPVP

XP_008455333.1 PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]1.5e-4582.26Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAM-VVKEKV---AIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCA
        MKP T FSI+FI FLL   PISSRRISQQNSRHGHHRK   A +SGKAAM VV EKV    +GRKG +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCA
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAM-VVKEKV---AIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCA

Query:  SLQEAETCPMTYRCMCNNKSYPVP
        SLQEAETCPM YRCMCNNKSYPVP
Subjt:  SLQEAETCPMTYRCMCNNKSYPVP

XP_022930814.1 uncharacterized protein LOC111437184 [Cucurbita moschata]2.5e-4071.32Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKV------ATAITSGKAAMVVKEKVA---IGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMI
        MK    FS++FIAFLLFPIPISSRRISQ NSR GHH K       A     GK+   V + VA   +GRKG +TVEVAGSSLPDCSHACGSCSPCRLVMI
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKV------ATAITSGKAAMVVKEKVA---IGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMI

Query:  SFVCASLQEAETCPMTYRCMCNNKSYPVP
        SFVCA+L EAETCPM YRCMCNNKSYPVP
Subjt:  SFVCASLQEAETCPMTYRCMCNNKSYPVP

XP_038888568.1 protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]1.1e-4680.83Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQE
        M PSTWFSILFIAF LFP PISSR ISQ+NS HGHHRK+AT     K     K K  IGRKGA TVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQE
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQE

Query:  AETCPMTYRCMCNNKSYPVP
        AETCPM YRCMCNNKSYP+P
Subjt:  AETCPMTYRCMCNNKSYPVP

TrEMBL top hitse value%identityAlignment
A0A0A0K5P8 Epidermal patterning factor-like protein3.5e-4885.6Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAM-VVKEKVA----IGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVC
        MKP T FSILFIAFLLF  PISSRRISQQNSRHGHHRK A A +SGKAAM VVKEK A    +GRKG +TVEVAGSSLPDCSHACGSCSPCRLVMISFVC
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAM-VVKEKVA----IGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVC

Query:  ASLQEAETCPMTYRCMCNNKSYPVP
        ASLQEAETCPM YRCMCNNKSYPVP
Subjt:  ASLQEAETCPMTYRCMCNNKSYPVP

A0A1S3C0N9 Epidermal patterning factor-like protein7.3e-4682.26Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAM-VVKEKV---AIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCA
        MKP T FSI+FI FLL   PISSRRISQQNSRHGHHRK   A +SGKAAM VV EKV    +GRKG +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCA
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAM-VVKEKV---AIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCA

Query:  SLQEAETCPMTYRCMCNNKSYPVP
        SLQEAETCPM YRCMCNNKSYPVP
Subjt:  SLQEAETCPMTYRCMCNNKSYPVP

A0A6J1ESJ9 Epidermal patterning factor-like protein1.2e-4071.32Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKV------ATAITSGKAAMVVKEKVA---IGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMI
        MK    FS++FIAFLLFPIPISSRRISQ NSR GHH K       A     GK+   V + VA   +GRKG +TVEVAGSSLPDCSHACGSCSPCRLVMI
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKV------ATAITSGKAAMVVKEKVA---IGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMI

Query:  SFVCASLQEAETCPMTYRCMCNNKSYPVP
        SFVCA+L EAETCPM YRCMCNNKSYPVP
Subjt:  SFVCASLQEAETCPMTYRCMCNNKSYPVP

A0A6J1GMI9 Epidermal patterning factor-like protein7.4e-3870Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQE
        MK STWFSI+FIAFLLFP PISS+RIS QNS                      ++ A+GRKG +TVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQE
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQE

Query:  AETCPMTYRCMCNNKSYPVP
        AETCPM YRCMCNNKSYP+P
Subjt:  AETCPMTYRCMCNNKSYPVP

A0A6J1JEL1 Epidermal patterning factor-like protein2.7e-4073.55Show/hide
Query:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVAT-AITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQ
        MK    FS++FIAFLLFPIPISSRRISQ NSR GHH K A  ++ + +AA       A+ RKG +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L 
Subjt:  MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVAT-AITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQ

Query:  EAETCPMTYRCMCNNKSYPVP
        EAETCPM YRCMCNNKSYPVP
Subjt:  EAETCPMTYRCMCNNKSYPVP

SwissProt top hitse value%identityAlignment
C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 74.3e-1151.85Show/hide
Query:  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP
        + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Subjt:  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.3e-0429.6Show/hide
Query:  FSILFIAFLLFPI---------PISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKG-----AKTVEVAGSSLPDCSHACGSCSPCRLVMIS
        FS+ ++  L F +         P S+     +NS  G       A   GK+ +V+K+   IG +       + +   GSS P CS  CG C+PC+ V + 
Subjt:  FSILFIAFLLFPI---------PISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKG-----AKTVEVAGSSLPDCSHACGSCSPCRLVMIS

Query:  FVCASLQEAETCPMTYRCMCNNKSY
            +   AE  P  +RC C NK Y
Subjt:  FVCASLQEAETCPMTYRCMCNNKSY

Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 22.5e-1151.47Show/hide
Query:  KVAIGRKGAKTVEV--AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP
        K  I + G   +E+   GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Subjt:  KVAIGRKGAKTVEV--AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP

Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 15.3e-2581.97Show/hide
Query:  RKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP
        R+   TV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPM Y+CMCNNKSYPVP
Subjt:  RKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP

Arabidopsis top hitse value%identityAlignment
AT1G34245.1 Putative membrane lipoprotein1.8e-1251.47Show/hide
Query:  KVAIGRKGAKTVEV--AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP
        K  I + G   +E+   GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Subjt:  KVAIGRKGAKTVEV--AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP

AT1G71866.1 LOCATED IN: endomembrane system3.1e-1251.85Show/hide
Query:  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP
        + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Subjt:  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP

AT2G20875.1 epidermal patterning factor 13.7e-2681.97Show/hide
Query:  RKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP
        R+   TV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPM Y+CMCNNKSYPVP
Subjt:  RKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP

AT2G30370.1 allergen-related5.6e-0633.75Show/hide
Query:  ITSGKAAMVVKEKVAIGRKG-----AKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSY
        +  GK+ +V+K+   IG +       + +   GSS P CS  CG C+PC+ V +     +   AE  P  +RC C NK Y
Subjt:  ITSGKAAMVVKEKVAIGRKG-----AKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSY

AT2G30370.2 allergen-related9.6e-0629.6Show/hide
Query:  FSILFIAFLLFPI---------PISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKG-----AKTVEVAGSSLPDCSHACGSCSPCRLVMIS
        FS+ ++  L F +         P S+     +NS  G       A   GK+ +V+K+   IG +       + +   GSS P CS  CG C+PC+ V + 
Subjt:  FSILFIAFLLFPI---------PISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKG-----AKTVEVAGSSLPDCSHACGSCSPCRLVMIS

Query:  FVCASLQEAETCPMTYRCMCNNKSY
            +   AE  P  +RC C NK Y
Subjt:  FVCASLQEAETCPMTYRCMCNNKSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTTCCACTTGGTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCCATACCCATTTCCTCCAGACGCATTTCTCAACAAAACTCACGTCATGGCCACCACCG
CAAGGTAGCAACAGCAATAACCTCTGGCAAAGCGGCAATGGTGGTGAAAGAGAAGGTTGCGATAGGGAGAAAAGGGGCAAAGACGGTTGAAGTAGCGGGGTCGAGCTTGC
CGGATTGTTCACATGCGTGTGGCTCATGTTCGCCGTGTAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTACAAGAGGCTGAAACATGCCCAATGACTTATAGATGC
ATGTGTAATAACAAGTCCTATCCTGTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAACCTCTTTTCTTCAACTTATAGTCTCAAACCATGAAGCCTTCCACTTGGTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCCATACCCATTTCCTCC
AGACGCATTTCTCAACAAAACTCACGTCATGGCCACCACCGCAAGGTAGCAACAGCAATAACCTCTGGCAAAGCGGCAATGGTGGTGAAAGAGAAGGTTGCGATAGGGAG
AAAAGGGGCAAAGACGGTTGAAGTAGCGGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGTTCGCCGTGTAGATTAGTGATGATAAGCTTTGTGTGTGCTT
CACTACAAGAGGCTGAAACATGCCCAATGACTTATAGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGATCCAAATCCTTTTCTTAATTTCAACTTTTAGGAAGA
TTGGGATGTAGATGGAAGGAAAAAACGTATATCCATGATTTAGAAGGTACTAACTACAATGTGTCGTACAAATATATCGATCAATTGTAGCACTAGTAACCCCTCCTCTT
GTTTTGGTATATTATTCTTTTTAGTCTTTTCTTTCTTGACTTTTTCTTGTGCGCATTAGAGTTGTAATCAAAGAGCTTCCTAATAACATTTTAACAACTTAGATACATAT
AATATTCGTGTGAATCGCAATGTTAGTGCTAATGATTCTAATATTATTTACAAAGTTTAATTAGTATTATATTGTTGTATTGTTTTCAATTACATGATTAGGAGGCTTGA
AGAATTTGATCCACCCAAACTCATTTATATTTTTTTCTATTTATAATGATTTTC
Protein sequenceShow/hide protein sequence
MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRC
MCNNKSYPVP