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Clc02G01410 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G01410
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionWound-responsive family protein
Genome locationClcChr02:1401879..1410833
RNA-Seq ExpressionClc02G01410
SyntenyClc02G01410
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031600.1 wound-responsive family protein [Cucumis melo var. makuwa]2.6e-4195.65Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG G VRSCDVDER+AQ+EDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG

KAE8645762.1 hypothetical protein Csa_020269 [Cucumis sativus]2.6e-4195.65Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG G VRSCDVDER+AQ+EDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG

KAG6572339.1 hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4094.57Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSLVGSEGPG VR+ D DERMAQTEDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG

KAG6589197.1 hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3686.96Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKS RQGR+LLSSGEN ADLRPLSSLVGSEGP  V+S D  ER+AQ+E+SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG

KAG7011951.1 hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-4195.65Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSLVGSEGPG VRS D DERMAQTEDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG

TrEMBL top hitse value%identityAlignment
A0A0A0K1Q6 Uncharacterized protein7.3e-2685.39Show/hide
Query:  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNN-CGVRAFSSHPNKLSSSSS----SSASVMADSSEVKRELDHSKAKQSEESLRTSLRL
        MCAGKSWTTAAAASIGAVEALKDQGHLWRLNN  GVRA SSH NKLSSSSS    SSASV+ADSSEVKRELDHSK KQSEESLRT + L
Subjt:  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNN-CGVRAFSSHPNKLSSSSS----SSASVMADSSEVKRELDHSKAKQSEESLRTSLRL

A0A0A0K6Z3 Uncharacterized protein1.2e-4195.65Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG G VRSCDVDER+AQ+EDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG

A0A5A7SLJ2 Wound-responsive family protein1.2e-4195.65Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG G VRSCDVDER+AQ+EDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG

A0A5D3C541 Uncharacterized protein1.9e-2687.5Show/hide
Query:  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNN-CGVRAFSSHPNKLSSSSS---SSASVMADSSEVKRELDHSKAKQSEESLRTSLRL
        MCAGKSWTTAAAASIGAVEALKDQGHLWRLNN  GVRA SSH NKLSSSSS   SSASVMADSSEVKRELDHSK KQSEESLRT + L
Subjt:  MCAGKSWTTAAAASIGAVEALKDQGHLWRLNN-CGVRAFSSHPNKLSSSSS---SSASVMADSSEVKRELDHSKAKQSEESLRTSLRL

A0A5N6RB28 Uncharacterized protein2.0e-2364.13Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNR+ MAASVAV QGHT+ G K K GLKSL+ G+R   SG +SADLRP+S ++G +  G + S D DER  Q E+SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28240.1 Wound-responsive family protein1.0e-1146.81Show/hide
Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSS--LVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLN+V MAAS    QG+ + G K KSGL S  + +R LSS     DLRPL++  L G   P   R        +  ++SLR+VMYLNCW QG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSS--LVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCCGGAAAAAGTTGGACAACGGCGGCCGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGGCATTTGTGGAGGCTGAATAATTGTGGTGTGAGGGC
ATTTTCGTCTCATCCCAACAAACTTTCTTCTTCTTCTTCTTCTTCAGCTTCTGTCATGGCGGATTCGAGTGAAGTTAAAAGGGAATTAGATCATAGTAAAGCCAAACAGT
CTGAAGAGTCTCTTAGAACTAGCTTGAGGTTGAAGATGAGTTACCTGAACAGAGTTGGAATGGCGGCGAGTGTGGCGGTGGCTCAAGGCCACACGGAGATCGGACACAAG
TGGAAATCTGGACTCAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGTGAAAATTCGGCGGATCTCCGTCCACTTTCCAGTTTGGTTGGATCGGAAGGTCCTGG
AGGTGTCCGGAGCTGTGACGTTGACGAGCGGATGGCGCAAACGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCCGGAAAAAGTTGGACAACGGCGGCCGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGGCATTTGTGGAGGCTGAATAATTGTGGTGTGAGGGC
ATTTTCGTCTCATCCCAACAAACTTTCTTCTTCTTCTTCTTCTTCAGCTTCTGTCATGGCGGATTCGAGTGAAGTTAAAAGGGAATTAGATCATAGTAAAGCCAAACAGT
CTGAAGAGTCTCTTAGAACTAGCTTGAGGTTGAAGATGAGTTACCTGAACAGAGTTGGAATGGCGGCGAGTGTGGCGGTGGCTCAAGGCCACACGGAGATCGGACACAAG
TGGAAATCTGGACTCAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGTGAAAATTCGGCGGATCTCCGTCCACTTTCCAGTTTGGTTGGATCGGAAGGTCCTGG
AGGTGTCCGGAGCTGTGACGTTGACGAGCGGATGGCGCAAACGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGGTGA
Protein sequenceShow/hide protein sequence
MCAGKSWTTAAAASIGAVEALKDQGHLWRLNNCGVRAFSSHPNKLSSSSSSSASVMADSSEVKRELDHSKAKQSEESLRTSLRLKMSYLNRVGMAASVAVAQGHTEIGHK
WKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGGVRSCDVDERMAQTEDSLRRVMYLNCWGQG