; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G01530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G01530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein TIC 20
Genome locationClcChr02:1499114..1501641
RNA-Seq ExpressionClc02G01530
SyntenyClc02G01530
Gene Ontology termsGO:0045037 - protein import into chloroplast stroma (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005691 - Chloroplast protein import component Tic20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011953.1 Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-15580.8Show/hide
Query:  CPIKYDIRDVPYSCMQSNTALPSASLFPSARKT------GKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRL
        CPIKY+IRDVPYSCM S TAL +ASLF    +T      GKMFAV PS+ ARL CNSPNPLL   P  T A  +SVRY++V LK CFKPSQVV+PQCRRL
Subjt:  CPIKYDIRDVPYSCMQSNTALPSASLFPSARKT------GKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRL

Query:  GSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVP
        G ANL T LVLSI+NTKQE CKELK SSS GMLIS +SAAASP L GEQGSLFHKLPLLPPR  AGKSP+AFRDDSYSVKR+S VT+KPEWWWRTLACVP
Subjt:  GSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVP

Query:  YLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQY
        YLMALQMSSTAYYLLPLLEHL+VDNLIFYVPG+VQ LPWWFP LYFNLAYFGVVRNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQY
Subjt:  YLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQY

Query:  WGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF
        W AVGFIYISIL +CIR SLLGTYAKIPFI ENALIHTFFS GRY+RPF
Subjt:  WGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

XP_004144571.2 protein TIC 20-IV, chloroplastic [Cucumis sativus]7.4e-14983.59Show/hide
Query:  MQSNTAL-PSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQEL
        MQSNTAL  SASLFP ARKTGKMFA                     PT TA GAS+RY  VFLKRCFKPS VV PQCRRLGSANLDTKL LSI  TKQ+ 
Subjt:  MQSNTAL-PSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQEL

Query:  CKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEH
        CKELK SSSRGM IS ISAAASP+LSGEQGSLFHKLPLLPPR  A K PRAFRDDSYSVKR SGVTQKP+WW RTLACVPYLMALQMSSTAYYL+PLLEH
Subjt:  CKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEH

Query:  LDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSL
        LDVDNLIFYVPGSVQ+LPWWFPMLYFNLAYFGVVRNKELPHF+RFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW AV FIYIS LLVCIRSSL
Subjt:  LDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSL

Query:  LGTYAKIPFIFENALIHTFFSIGRYYRPF
        LGTYAKIPFIFENALIHTFF+IGRYYRPF
Subjt:  LGTYAKIPFIFENALIHTFFSIGRYYRPF

XP_022952618.1 protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata]1.5e-14479.7Show/hide
Query:  MQSNTALPSASLF------PSARKTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSIT
        M S TAL +AS F          K GKM AV PS+ ARL CNS NPLL + P TT A  +SVRY++V LK CFKPSQVV+PQCRRL  ANL T LVLSI+
Subjt:  MQSNTALPSASLF------PSARKTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSIT

Query:  NTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYL
        NTKQE CKELK SSSRGMLIS +SAAASP L GEQGSLFHKLPLLPPR  AGKSP+ FRDDSY VKR+S VT+KPEWWWRTLACVPYLMALQMSSTAYYL
Subjt:  NTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYL

Query:  LPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV
        LPLLEHL+VDNLIFYVPG+VQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +
Subjt:  LPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV

Query:  CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF
        CIRSSLLGTYAKIPFI ENALIHTFFS GRY+RPF
Subjt:  CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

XP_023554543.1 protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]2.6e-14680.3Show/hide
Query:  MQSNTALPSASLFPSARKT------GKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSIT
        M S TAL +ASLF    +T      GKMFAV PS+ ARL CNSPNPLL + P TT A  +SVRY++V LK CFKPSQVV+PQCRRL  ANL T LVLSI+
Subjt:  MQSNTALPSASLFPSARKT------GKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSIT

Query:  NTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYL
        NTKQE CKELK SSSRGML+S +SAAASP L GEQGSLFHKLPLLPPR  A KSP+AFRDDSY VKR+S VT+KPEWWWRTLACVPYLMALQMSSTAYYL
Subjt:  NTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYL

Query:  LPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV
        LPLLEHL+VDNLIFYVPG+VQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +
Subjt:  LPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV

Query:  CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF
        CIRSSLLGTYAKIPFI ENALIHTFFS GRY+RPF
Subjt:  CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

XP_038888476.1 protein TIC 20-IV, chloroplastic [Benincasa hispida]7.4e-16591.99Show/hide
Query:  RKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQI
        +KTGKMFAVGPSNARLHCNSPNPLLP PP T TA GASVRYK+VFLKRCFKPSQVV+PQC R GS+NLDTKLVLSITNTKQE  KELK SSS+G+LISQ+
Subjt:  RKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQI

Query:  SAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKL
        SAAASPHLSGEQGSLFHKLPLLPPRNCAGKSP+AFRDDSYSVKR+SGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFY+PG VQKL
Subjt:  SAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKL

Query:  PWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIH
        PWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLET LDI+WY+SNFMPLIHYNGTYAMQYW AVGFIYIS LLVCIRSSLLGTYAKIPFIFENALIH
Subjt:  PWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIH

Query:  TFFSIGRYYRPF
        TFFSIGRYYRPF
Subjt:  TFFSIGRYYRPF

TrEMBL top hitse value%identityAlignment
A0A0A0K289 Protein TIC 208.9e-15683.14Show/hide
Query:  KCPIKYDIRDVPYSCMQSNTAL-PSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANL
        K  IKY+IRDV YSCMQSNTAL  SASLFP ARKTGKMFA                     PT TA GAS+RY  VFLKRCFKPS VV PQCRRLGSANL
Subjt:  KCPIKYDIRDVPYSCMQSNTAL-PSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANL

Query:  DTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMAL
        DTKL LSI  TKQ+ CKELK SSSRGM IS ISAAASP+LSGEQGSLFHKLPLLPPR  A K PRAFRDDSYSVKR SGVTQKP+WW RTLACVPYLMAL
Subjt:  DTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMAL

Query:  QMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVG
        QMSSTAYYL+PLLEHLDVDNLIFYVPGSVQ+LPWWFPMLYFNLAYFGVVRNKELPHF+RFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW AV 
Subjt:  QMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVG

Query:  FIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF
        FIYIS LLVCIRSSLLGTYAKIPFIFENALIHTFF+IGRYYRPF
Subjt:  FIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

A0A1S3C1G8 Protein TIC 201.5e-14289.72Show/hide
Query:  TTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGK
        T  A GASVRY +VFLKRCFKPS VVMPQCRRL SANLDTKL LSIT  KQ+ CKELK SSSRGMLIS IS+AASPHLSGEQG LFHKLPL PPRN A K
Subjt:  TTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGK

Query:  SPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHV
         PRAFRDDSYSVKR SGVTQKPEWW RTLACVPYLMA+QMSSTAYYL+PLLEHLDVDNLIFYVPGSVQ+LPWWFPMLYFNLAYFGVVRNKELPHF RFHV
Subjt:  SPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHV

Query:  MMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF
        MMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW AVGFIYIS LLVCIRSSLLGTYAKIPFIFENALIHTFF+IGRYYRPF
Subjt:  MMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

A0A6J1GL44 Protein TIC 207.0e-14579.7Show/hide
Query:  MQSNTALPSASLF------PSARKTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSIT
        M S TAL +AS F          K GKM AV PS+ ARL CNS NPLL + P TT A  +SVRY++V LK CFKPSQVV+PQCRRL  ANL T LVLSI+
Subjt:  MQSNTALPSASLF------PSARKTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSIT

Query:  NTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYL
        NTKQE CKELK SSSRGMLIS +SAAASP L GEQGSLFHKLPLLPPR  AGKSP+ FRDDSY VKR+S VT+KPEWWWRTLACVPYLMALQMSSTAYYL
Subjt:  NTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYL

Query:  LPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV
        LPLLEHL+VDNLIFYVPG+VQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +
Subjt:  LPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV

Query:  CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF
        CIRSSLLGTYAKIPFI ENALIHTFFS GRY+RPF
Subjt:  CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

A0A6J1GMA4 Protein TIC 204.6e-14483.01Show/hide
Query:  KTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQI
        K GKM AV PS+ ARL CNS NPLL + P TT A  +SVRY++V LK CFKPSQVV+PQCRRL  ANL T LVLSI+NTKQE CKELK SSSRGMLIS +
Subjt:  KTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQI

Query:  SAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKL
        SAAASP L GEQGSLFHKLPLLPPR  AGKSP+ FRDDSY VKR+S VT+KPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHL+VDNLIFYVPG+VQ L
Subjt:  SAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKL

Query:  PWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIH
        PWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +CIRSSLLGTYAKIPFI ENALIH
Subjt:  PWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIH

Query:  TFFSIGRYYRPF
        TFFS GRY+RPF
Subjt:  TFFSIGRYYRPF

A0A6J1HZ71 Protein TIC 204.6e-14478.81Show/hide
Query:  MQSNTALPSASLFPSARKT------GKMFAVGP-SNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSIT
        M S TAL +ASLF    +T      GKMFAV P S+ARL CNSPNPLL + P T  A  +SVRY++V LK CFKPSQVV+PQCRRLG ANL   LVL I+
Subjt:  MQSNTALPSASLFPSARKT------GKMFAVGP-SNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSIT

Query:  NTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYL
        NTKQE CKELK SSSRGM+IS +SAAASP L GEQGSLFHKLPLLPPR  A KSP+AFRDDSY VKR+S +T+KPEWWWRTLACVPYLMALQMSSTAYYL
Subjt:  NTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYL

Query:  LPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV
        LPLLEHL+VDNLIFYVPG+VQ LPWWFPMLY NLAYFGVVRNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +
Subjt:  LPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV

Query:  CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF
        CIRSSL+GTYAKIPFI ENALIHTFFS GRY+RPF
Subjt:  CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

SwissProt top hitse value%identityAlignment
Q8GZ79 Protein TIC 20-I, chloroplastic4.2e-4649.06Show/hide
Query:  SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVD
        SRG+ +S +SA++S  L+GEQGSL   LP+LP R     +PRA +D   S  R+  +T+KP+WWWRTLAC+PYLM L      + TAY+L P LE  D +
Subjt:  SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVD

Query:  NLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTY
         L +   G++ +LP WF M YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV F Y+  +L  IR +L G Y
Subjt:  NLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTY

Query:  AKIPFIFENALI
        A IPF+ + A I
Subjt:  AKIPFIFENALI

Q9ZQZ9 Protein TIC 20-IV, chloroplastic2.7e-5342.91Show/hide
Query:  NLDT--KLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGE------QGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRT
        N+D+  KL LS ++  +   +E+   S+   +    +A +S  L          G   H+ P+ P         R  +DD + +K    + ++PEWWWRT
Subjt:  NLDT--KLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGE------QGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRT

Query:  LACVPYLMALQMSSTAYYLLPLLE-HLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNG
        LACVPYL++LQ+S   +Y+ P LE H  + ++I+++PG++ + P WF M+Y  L Y  VV+NKELPH++RFH+MMGMLLET+L +IW  SNF PLIH+ G
Subjt:  LACVPYLMALQMSSTAYYLLPLLE-HLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNG

Query:  TYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRP
         + M YW A+GF YI +LL CIR +L G YA+IPF+ + A IHT F++G + RP
Subjt:  TYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRP

Q9ZST8 Protein TIC 20, chloroplastic2.3e-3633.96Show/hide
Query:  GASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAF
        G +V   +V    C  P++V +   R     +L+ K                     RGM  + +SA +S  LSG Q  L   +P+LP  + +  +PRA 
Subjt:  GASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAF

Query:  RDDSYSVKRYSGVTQKPEWWWRTLACVPYLM----ALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVM
        +D S    R+  +T+KP WWWRTL+C+PYL+    A   + TAY+L P + +       F +  ++  LP W  + YF +AY  +VR KE PHF RFHV 
Subjt:  RDDSYSVKRYSGVTQKPEWWWRTLACVPYLM----ALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVM

Query:  MGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALI
        +GML+E +L +    S +MP   Y G   M +W    F+++   + CIR +L+G YA +PF+ + A I
Subjt:  MGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALI

Arabidopsis top hitse value%identityAlignment
AT1G04940.1 translocon at the inner envelope membrane of chloroplasts 203.0e-4749.06Show/hide
Query:  SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVD
        SRG+ +S +SA++S  L+GEQGSL   LP+LP R     +PRA +D   S  R+  +T+KP+WWWRTLAC+PYLM L      + TAY+L P LE  D +
Subjt:  SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVD

Query:  NLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTY
         L +   G++ +LP WF M YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV F Y+  +L  IR +L G Y
Subjt:  NLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTY

Query:  AKIPFIFENALI
        A IPF+ + A I
Subjt:  AKIPFIFENALI

AT1G04945.3 HIT-type Zinc finger family protein1.0e-4248.98Show/hide
Query:  SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVD
        SRG+ +S +SA++S  L+GEQGSL   LP+LP R     +PRA +D   S  R+  +T+KP+WWWRTLAC+PYLM L      + TAY+L P LE  D +
Subjt:  SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVD

Query:  NLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSL
         L +   G++ +LP WF M YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV F Y+  +L  IR +L
Subjt:  NLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSL

AT4G03320.1 translocon at the inner envelope membrane of chloroplasts 20-IV1.9e-5442.91Show/hide
Query:  NLDT--KLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGE------QGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRT
        N+D+  KL LS ++  +   +E+   S+   +    +A +S  L          G   H+ P+ P         R  +DD + +K    + ++PEWWWRT
Subjt:  NLDT--KLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGE------QGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRT

Query:  LACVPYLMALQMSSTAYYLLPLLE-HLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNG
        LACVPYL++LQ+S   +Y+ P LE H  + ++I+++PG++ + P WF M+Y  L Y  VV+NKELPH++RFH+MMGMLLET+L +IW  SNF PLIH+ G
Subjt:  LACVPYLMALQMSSTAYYLLPLLE-HLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNG

Query:  TYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRP
         + M YW A+GF YI +LL CIR +L G YA+IPF+ + A IHT F++G + RP
Subjt:  TYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAAACGACCCCAAAGGTTTTGGGTATTTCCTATTAAGTGCCCAATAAAATATGATATTAGAGATGTACCCTATTCTTGCATGCAAAGTAACACGGCCCTACCCTC
CGCCTCACTTTTCCCTTCTGCGCGAAAAACAGGAAAGATGTTTGCGGTTGGTCCGAGCAACGCCCGACTCCACTGCAACTCACCGAATCCGCTCCTCCCGCTGCCGCCGC
CGACAACGACGGCGATAGGCGCATCCGTACGGTACAAGAATGTGTTTCTGAAAAGATGTTTCAAGCCCAGCCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCT
AACTTGGACACAAAACTTGTTTTATCTATTACCAATACTAAACAGGAACTTTGTAAAGAACTGAAGCTTTCTTCTTCTAGAGGAATGTTGATATCACAGATTTCTGCAGC
AGCATCCCCACATCTATCTGGGGAACAAGGCAGTCTATTCCACAAACTTCCACTTTTACCTCCACGAAATTGTGCTGGAAAGAGTCCTCGAGCATTCAGAGACGACTCTT
ACAGTGTAAAACGCTACTCTGGGGTCACCCAAAAACCAGAATGGTGGTGGAGAACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTAC
CTCTTGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCTGGATCTGTTCAGAAGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTCGCATA
CTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTAGACATCATATGGTATGCAAGCAATTTCA
TGCCACTCATACATTACAATGGTACATATGCAATGCAGTATTGGGGAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGTATAAGGAGTTCTCTCTTGGGGACT
TATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACATTCTTTAGTATAGGACGATATTATCGACCATTCTAG
mRNA sequenceShow/hide mRNA sequence
GTAACCCTCACCGAGCACCGTCAGGCCAAAATGCAAAATGCTAAAACGACCCCAAAGGTTTTGGGTATTTCCTATTAAGTGCCCAATAAAATATGATATTAGAGATGTAC
CCTATTCTTGCATGCAAAGTAACACGGCCCTACCCTCCGCCTCACTTTTCCCTTCTGCGCGAAAAACAGGAAAGATGTTTGCGGTTGGTCCGAGCAACGCCCGACTCCAC
TGCAACTCACCGAATCCGCTCCTCCCGCTGCCGCCGCCGACAACGACGGCGATAGGCGCATCCGTACGGTACAAGAATGTGTTTCTGAAAAGATGTTTCAAGCCCAGCCA
AGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTGGACACAAAACTTGTTTTATCTATTACCAATACTAAACAGGAACTTTGTAAAGAACTGAAGCTTTCTT
CTTCTAGAGGAATGTTGATATCACAGATTTCTGCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGTCTATTCCACAAACTTCCACTTTTACCTCCACGAAATTGT
GCTGGAAAGAGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCTACTCTGGGGTCACCCAAAAACCAGAATGGTGGTGGAGAACTTTGGCTTGTGTTCCATA
TTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCTTGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCTGGATCTGTTCAGAAGTTAC
CGTGGTGGTTCCCCATGTTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTATTAGAA
ACCTCGCTAGACATCATATGGTATGCAAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAGTATTGGGGAGCAGTGGGGTTCATCTACATTTCCAT
CTTGTTGGTGTGTATAAGGAGTTCTCTCTTGGGGACTTATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACATTCTTTAGTATAGGACGATATTATCGAC
CATTCTAGACTAGAGTGAGGTATGTTGTATGAGTTAGAGTCTTAGCGGTAGAGAATAAAGAACCAGAGAGCAAGCTCTTGATCGAGTCTGATGTCGTTTGGGAGATGTTT
GTTAATTTTTATGAGTGGGAACTGGAGTGTAAGATCTTATACTCTTTTAGTTTTTCCTTTAGTCTAGAGTATGTATTTTGCAGATTTGATCAGTGTTTTATTTAAGGGAG
ACAAGAACTTGCTGAACTCCTGCAGTGTGCACAATATTCAATCATATGGCTTCCAAGTTCTCAATGGAAAAATTTTCTTGTGAAA
Protein sequenceShow/hide protein sequence
MLKRPQRFWVFPIKCPIKYDIRDVPYSCMQSNTALPSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSA
NLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYY
LLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGT
YAKIPFIFENALIHTFFSIGRYYRPF