; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G01685 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G01685
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein family
Genome locationClcChr02:1582564..1583631
RNA-Seq ExpressionClc02G01685
SyntenyClc02G01685
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135919.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Momordica charantia]2.4e-7267.58Show/hide
Query:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF
        V    E WA L+S+      RL   RN++     ++      + RT P     Y  +  IYAA KQWT  EKVR TMR+HGLKKPAGYSLIELDSQVH F
Subjt:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF

Query:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-
        FVGD+SHQQTKDIYAKLKDI+  LKE+G+KPDTS VLYDV EEQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV KLISKLMDREI  
Subjt:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-

Query:  ----RFHHFIDGLCSCGDY
            RFHHFIDG+CSCGD+
Subjt:  ----RFHHFIDGLCSCGDY

XP_022135920.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X2 [Momordica charantia]2.4e-7267.58Show/hide
Query:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF
        V    E WA L+S+      RL   RN++     ++      + RT P     Y  +  IYAA KQWT  EKVR TMR+HGLKKPAGYSLIELDSQVH F
Subjt:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF

Query:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-
        FVGD+SHQQTKDIYAKLKDI+  LKE+G+KPDTS VLYDV EEQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV KLISKLMDREI  
Subjt:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-

Query:  ----RFHHFIDGLCSCGDY
            RFHHFIDG+CSCGD+
Subjt:  ----RFHHFIDGLCSCGDY

XP_022968999.1 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucurbita maxima]1.2e-7177.4Show/hide
Query:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE
        + RT P     Y  +  IYAA+KQWT  EKVR TMR +GLKKPAGYSLIELDSQVH FFVGDKSHQQTKDIYAKLKDI+  LKE G+KPDTS +LYDV+E
Subjt:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE

Query:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI-----FRFHHFIDGLCSCGDY
        EQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV KLISKLMDREI      RFHHFIDG+CSCGD+
Subjt:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI-----FRFHHFIDGLCSCGDY

XP_023554404.1 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita pepo subsp. pepo]2.1e-7177.4Show/hide
Query:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE
        + RT P     Y  +  IYAA+KQWT  EKVR TMR +GLKKPAGYSLIELDSQVH FFVGDKSHQQTKDIYAKLKDI+  LKE G+KPDTS +LYDV E
Subjt:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE

Query:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI-----FRFHHFIDGLCSCGDY
        EQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV KLISKLMDREI      RFHHFIDG+CSCGD+
Subjt:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI-----FRFHHFIDGLCSCGDY

XP_038887372.1 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benincasa hispida]1.1e-7266.67Show/hide
Query:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF
        V    + WA L+S+      RL   RN++     ++      + RT P     Y  +  IYAA+KQWT  EKVR TMRK GLKKPAGYSLIELDSQ+H F
Subjt:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF

Query:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI--
        FVGDKSHQ+TKDIYAKLKDI+  LKE+GYKPDTS VLYDV+EEQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV K ISKLMDREI  
Subjt:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI--

Query:  ---FRFHHFIDGLCSCGDY
            RFHHFIDG+CSCGD+
Subjt:  ---FRFHHFIDGLCSCGDY

TrEMBL top hitse value%identityAlignment
A0A2P6S2G8 Putative tetratricopeptide-like helical domain, DYW domain-containing protein5.1e-6065.73Show/hide
Query:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH
        K+    PE  G Y  +  IYAA K+W   E+VR  +RK GLKKP G + +ELD  VH F VGDKSH QT+DIYAKLKD+N  L+E GYKPDT+ VLYDV 
Subjt:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH

Query:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        EE KEK+LWDHSERLAIAFAL+NT PGT IRITKNLR+CVDCHTV K+ISK   REI      RFHHF DG CSCGDY
Subjt:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

A0A6J1C2E2 pentatricopeptide repeat-containing protein At3g12770-like isoform X21.2e-7267.58Show/hide
Query:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF
        V    E WA L+S+      RL   RN++     ++      + RT P     Y  +  IYAA KQWT  EKVR TMR+HGLKKPAGYSLIELDSQVH F
Subjt:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF

Query:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-
        FVGD+SHQQTKDIYAKLKDI+  LKE+G+KPDTS VLYDV EEQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV KLISKLMDREI  
Subjt:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-

Query:  ----RFHHFIDGLCSCGDY
            RFHHFIDG+CSCGD+
Subjt:  ----RFHHFIDGLCSCGDY

A0A6J1C2U5 pentatricopeptide repeat-containing protein At3g12770-like isoform X11.2e-7267.58Show/hide
Query:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF
        V    E WA L+S+      RL   RN++     ++      + RT P     Y  +  IYAA KQWT  EKVR TMR+HGLKKPAGYSLIELDSQVH F
Subjt:  VNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTF

Query:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-
        FVGD+SHQQTKDIYAKLKDI+  LKE+G+KPDTS VLYDV EEQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV KLISKLMDREI  
Subjt:  FVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-

Query:  ----RFHHFIDGLCSCGDY
            RFHHFIDG+CSCGD+
Subjt:  ----RFHHFIDGLCSCGDY

A0A6J1GMH0 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial1.4e-7076.27Show/hide
Query:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE
        + RT P     Y  +  IYAA+KQWT  EKVR TMR +GLKKPAGYS IELDSQVH FFVGDKSHQQTKDIYAKLKDI+  LKE G+KPDTS +LYDV+E
Subjt:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE

Query:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI-----FRFHHFIDGLCSCGDY
        EQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV KLISKL DREI      RFHHFIDG+CSCGD+
Subjt:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI-----FRFHHFIDGLCSCGDY

A0A6J1I1A3 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like5.8e-7277.4Show/hide
Query:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE
        + RT P     Y  +  IYAA+KQWT  EKVR TMR +GLKKPAGYSLIELDSQVH FFVGDKSHQQTKDIYAKLKDI+  LKE G+KPDTS +LYDV+E
Subjt:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE

Query:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI-----FRFHHFIDGLCSCGDY
        EQKEK+LWDHSERLAIAFALLNT PGTKIRITKNLRVC DCHTV KLISKLMDREI      RFHHFIDG+CSCGD+
Subjt:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREI-----FRFHHFIDGLCSCGDY

SwissProt top hitse value%identityAlignment
Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic1.3e-4449.72Show/hide
Query:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE
        L++  PE PG Y  +  IYA+  +W    K R  +   G+KK  G S IE+DS VH F +GDK H + ++IY  L+++  LL++ G+ PDTS VL ++ E
Subjt:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE

Query:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        E KE  L  HSE+LAIAF L++T PGTK+ I KNLRVC +CH   KLISK+  REI      RFHHF DG+CSC DY
Subjt:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

Q9LNU6 Pentatricopeptide repeat-containing protein At1g202301.1e-4346.07Show/hide
Query:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH
        KL    PE PG Y  +  IYAA   WT  + +R  M   GLKK  G S I++ ++V+T   GDKSH Q   I  K+ +I+  +++ G++P+    L+DV 
Subjt:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH

Query:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        E+++E++LW HSE+LA+ F LLNT  GT +++ KNLR+C DCH V K IS    REIF     RFHHF DG+CSCGD+
Subjt:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

Q9LW32 Pentatricopeptide repeat-containing protein At3g26782, mitochondrial1.1e-4351.79Show/hide
Query:  GLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWD
        G Y  +  IYA   +W   E+VR  M+  GL KP G+SL+EL+ +VH F +GD+ H Q + IY  L ++N  L E GY  +TS V +DV EE+KE  L  
Subjt:  GLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWD

Query:  HSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        HSE+LAIAF ++NT PG+ + + KNLRVC DCH V KLISK++DRE       RFHHF DG CSCGDY
Subjt:  HSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

Q9SMZ2 Pentatricopeptide repeat-containing protein At4g331707.2e-4345.7Show/hide
Query:  ESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDT
        E+   +  KLL   P     Y  +  +YAA  +W   +  R  M+ H +KK  G+S IE+ +++H F V D+S++QT+ IY K+KD+   +K++GY P+T
Subjt:  ESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDT

Query:  SLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
           L DV EE+KE+ L+ HSE+LA+AF LL+T P T IR+ KNLRVC DCH   K I+K+ +REI      RFH F DG+CSCGDY
Subjt:  SLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

Q9SUH6 Pentatricopeptide repeat-containing protein At4g307002.6e-4550.56Show/hide
Query:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH
        KL    P+  G +  +  I++A + +  A  VR T +K  L K  GY+LIE+    H F  GD+SH Q K+IY KL+ +   ++E GY+P+T L L+DV 
Subjt:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH

Query:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        EE++E ++  HSERLAIAF L+ T PGT+IRI KNLRVC+DCHTV KLISK+ +R I      RFHHF DG+CSCGDY
Subjt:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.3e-4649.72Show/hide
Query:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE
        L++  PE PG Y  +  IYA+  +W    K R  +   G+KK  G S IE+DS VH F +GDK H + ++IY  L+++  LL++ G+ PDTS VL ++ E
Subjt:  LLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHE

Query:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        E KE  L  HSE+LAIAF L++T PGTK+ I KNLRVC +CH   KLISK+  REI      RFHHF DG+CSC DY
Subjt:  EQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein7.9e-4546.07Show/hide
Query:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH
        KL    PE PG Y  +  IYAA   WT  + +R  M   GLKK  G S I++ ++V+T   GDKSH Q   I  K+ +I+  +++ G++P+    L+DV 
Subjt:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH

Query:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        E+++E++LW HSE+LA+ F LLNT  GT +++ KNLR+C DCH V K IS    REIF     RFHHF DG+CSCGD+
Subjt:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.9e-4551.79Show/hide
Query:  GLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWD
        G Y  +  IYA   +W   E+VR  M+  GL KP G+SL+EL+ +VH F +GD+ H Q + IY  L ++N  L E GY  +TS V +DV EE+KE  L  
Subjt:  GLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWD

Query:  HSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        HSE+LAIAF ++NT PG+ + + KNLRVC DCH V KLISK++DRE       RFHHF DG CSCGDY
Subjt:  HSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-4650.56Show/hide
Query:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH
        KL    P+  G +  +  I++A + +  A  VR T +K  L K  GY+LIE+    H F  GD+SH Q K+IY KL+ +   ++E GY+P+T L L+DV 
Subjt:  KLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVH

Query:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
        EE++E ++  HSERLAIAF L+ T PGT+IRI KNLRVC+DCHTV KLISK+ +R I      RFHHF DG+CSCGDY
Subjt:  EEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY

AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.1e-4445.7Show/hide
Query:  ESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDT
        E+   +  KLL   P     Y  +  +YAA  +W   +  R  M+ H +KK  G+S IE+ +++H F V D+S++QT+ IY K+KD+   +K++GY P+T
Subjt:  ESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHGLKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDT

Query:  SLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY
           L DV EE+KE+ L+ HSE+LA+AF LL+T P T IR+ KNLRVC DCH   K I+K+ +REI      RFH F DG+CSCGDY
Subjt:  SLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLISKLMDREIF-----RFHHFIDGLCSCGDY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGGAAGAAGCTGGGGTATTATGATATATCATTTTCTGTTTCACTTGATCTCCTCTATCACTCTTGATAACCAAGCCTTGGTTAATGACCAAATTGAGGAATG
GGCTAACCTAATGTCTTCCTTACTGAATCCTTACTGGAGGCTTGATAGCAGAAGAAACCTAAAGTGCATTGGCTTTGAAAGTGAATTGAATATTCTATACAAACTCCTTC
GCACAAGGCCGGAAACTCCAGGCCTATATGCATACATCATTAGGATTTACGCTGCTATTAAACAATGGACTGTTGCGGAAAAGGTGAGGCCTACGATGAGAAAACATGGA
TTGAAAAAACCTGCGGGCTATAGTTTAATTGAGCTTGATAGCCAGGTTCATACGTTCTTTGTTGGAGACAAATCACACCAACAGACAAAAGATATATATGCCAAATTGAA
GGATATAAATTCGCTACTCAAGGAGGATGGGTACAAGCCCGATACAAGTCTGGTGTTATATGATGTCCATGAAGAACAAAAAGAGAAGATTCTTTGGGATCATAGTGAGC
GGTTGGCCATTGCTTTTGCTCTTCTAAATACCTCTCCAGGCACTAAAATTAGGATAACTAAGAATCTTCGAGTATGTGTAGATTGCCACACGGTAGCAAAATTAATATCA
AAACTCATGGATCGAGAAATCTTCAGGTTTCACCATTTTATTGATGGCCTTTGTTCTTGTGGTGATTACATAACTTTGTTTCATATCAAATTTATTCAAAAACAAGAGGT
TTCACCATTTTATAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTGGAAGAAGCTGGGGTATTATGATATATCATTTTCTGTTTCACTTGATCTCCTCTATCACTCTTGATAACCAAGCCTTGGTTAATGACCAAATTGAGGAATG
GGCTAACCTAATGTCTTCCTTACTGAATCCTTACTGGAGGCTTGATAGCAGAAGAAACCTAAAGTGCATTGGCTTTGAAAGTGAATTGAATATTCTATACAAACTCCTTC
GCACAAGGCCGGAAACTCCAGGCCTATATGCATACATCATTAGGATTTACGCTGCTATTAAACAATGGACTGTTGCGGAAAAGGTGAGGCCTACGATGAGAAAACATGGA
TTGAAAAAACCTGCGGGCTATAGTTTAATTGAGCTTGATAGCCAGGTTCATACGTTCTTTGTTGGAGACAAATCACACCAACAGACAAAAGATATATATGCCAAATTGAA
GGATATAAATTCGCTACTCAAGGAGGATGGGTACAAGCCCGATACAAGTCTGGTGTTATATGATGTCCATGAAGAACAAAAAGAGAAGATTCTTTGGGATCATAGTGAGC
GGTTGGCCATTGCTTTTGCTCTTCTAAATACCTCTCCAGGCACTAAAATTAGGATAACTAAGAATCTTCGAGTATGTGTAGATTGCCACACGGTAGCAAAATTAATATCA
AAACTCATGGATCGAGAAATCTTCAGGTTTCACCATTTTATTGATGGCCTTTGTTCTTGTGGTGATTACATAACTTTGTTTCATATCAAATTTATTCAAAAACAAGAGGT
TTCACCATTTTATAGATAG
Protein sequenceShow/hide protein sequence
MATGRSWGIMIYHFLFHLISSITLDNQALVNDQIEEWANLMSSLLNPYWRLDSRRNLKCIGFESELNILYKLLRTRPETPGLYAYIIRIYAAIKQWTVAEKVRPTMRKHG
LKKPAGYSLIELDSQVHTFFVGDKSHQQTKDIYAKLKDINSLLKEDGYKPDTSLVLYDVHEEQKEKILWDHSERLAIAFALLNTSPGTKIRITKNLRVCVDCHTVAKLIS
KLMDREIFRFHHFIDGLCSCGDYITLFHIKFIQKQEVSPFYR