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Clc02G01810 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G01810
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionB box-type domain-containing protein
Genome locationClcChr02:1660322..1660914
RNA-Seq ExpressionClc02G01810
SyntenyClc02G01810
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572307.1 B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5075.56Show/hide
Query:  MCKGVEQDETQAAVRQQRTTE--EVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSI
        MCKGV Q+ETQA V+++RTTE     GGG DP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLPSI
Subjt:  MCKGVEQDETQAAVRQQRTTE--EVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSI

Query:  VSRSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL
        VS S +E NFQNYHC SD + +N SQ+L+ PCLFL
Subjt:  VSRSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL

KGN43541.1 hypothetical protein Csa_020490 [Cucumis sativus]7.3e-5785.19Show/hide
Query:  MCKGVEQDE-TQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL-PSI
        MCKGVEQ+E TQ AVRQ+RTT++   GG DPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL PS+
Subjt:  MCKGVEQDE-TQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL-PSI

Query:  VSRSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL
        VSR   E NF NYHCDSD FV+NCSQVLK PCLFL
Subjt:  VSRSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL

XP_008455408.1 PREDICTED: B-box zinc finger protein 21 [Cucumis melo]9.5e-5783.46Show/hide
Query:  MCKGVEQDETQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS
        MCKGVEQ+ET+A VRQ+ TT++    G DPVRCELCGSRASLYCEADEAYLCGKCDKSVH+ANFLALRHVRCLLCNTCQSHTQRYLLGASMEVV+PSIVS
Subjt:  MCKGVEQDETQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS

Query:  RSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL
        R   E NF NYHCDSD FV+NCSQVLK PCLFL
Subjt:  RSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL

XP_022953004.1 B-box domain protein 30 [Cucurbita moschata]1.6e-4380.73Show/hide
Query:  GGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVETNFQNYHCDSDYFVRNCSQ
        GGG DP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLPSIVS SS+E NFQNYHC SD + +N SQ
Subjt:  GGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVETNFQNYHCDSDYFVRNCSQ

Query:  VLKIPCLFL
        +L+ PCLFL
Subjt:  VLKIPCLFL

XP_023511647.1 B-box domain protein 30-like [Cucurbita pepo subsp. pepo]1.7e-5075.56Show/hide
Query:  MCKGVEQDETQAAVRQQRTTE--EVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSI
        MCKGV Q++TQA V+++RTTE     GGG DP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RY+LGASMEVVLPSI
Subjt:  MCKGVEQDETQAAVRQQRTTE--EVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSI

Query:  VSRSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL
        VS SS+E NFQNYHC SD + +N SQ+LK PCLFL
Subjt:  VSRSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K6V9 B box-type domain-containing protein3.5e-5785.19Show/hide
Query:  MCKGVEQDE-TQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL-PSI
        MCKGVEQ+E TQ AVRQ+RTT++   GG DPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL PS+
Subjt:  MCKGVEQDE-TQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVL-PSI

Query:  VSRSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL
        VSR   E NF NYHCDSD FV+NCSQVLK PCLFL
Subjt:  VSRSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL

A0A1S3C0U6 B-box zinc finger protein 214.6e-5783.46Show/hide
Query:  MCKGVEQDETQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS
        MCKGVEQ+ET+A VRQ+ TT++    G DPVRCELCGSRASLYCEADEAYLCGKCDKSVH+ANFLALRHVRCLLCNTCQSHTQRYLLGASMEVV+PSIVS
Subjt:  MCKGVEQDETQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS

Query:  RSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL
        R   E NF NYHCDSD FV+NCSQVLK PCLFL
Subjt:  RSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL

A0A5A7TAC0 B-box zinc finger protein 214.6e-5783.46Show/hide
Query:  MCKGVEQDETQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS
        MCKGVEQ+ET+A VRQ+ TT++    G DPVRCELCGSRASLYCEADEAYLCGKCDKSVH+ANFLALRHVRCLLCNTCQSHTQRYLLGASMEVV+PSIVS
Subjt:  MCKGVEQDETQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVS

Query:  RSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL
        R   E NF NYHCDSD FV+NCSQVLK PCLFL
Subjt:  RSSVETNFQNYHCDSDYFVRNCSQVLKIPCLFL

A0A6J1GNE7 B-box domain protein 307.6e-4480.73Show/hide
Query:  GGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVETNFQNYHCDSDYFVRNCSQ
        GGG DP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLPSIVS SS+E NFQNYHC SD + +N SQ
Subjt:  GGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVETNFQNYHCDSDYFVRNCSQ

Query:  VLKIPCLFL
        +L+ PCLFL
Subjt:  VLKIPCLFL

A0A6J1HUR8 B-box domain protein 301.5e-3977.98Show/hide
Query:  GGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVETNFQNYHCDSDYFVRNCSQ
        GGG DP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLPSIVS SS++ NFQN   DSD + +N SQ
Subjt:  GGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVETNFQNYHCDSDYFVRNCSQ

Query:  VLKIPCLFL
        +LK  CLFL
Subjt:  VLKIPCLFL

SwissProt top hitse value%identityAlignment
Q1G3I2 B-box domain protein 305.7e-2044.74Show/hide
Query:  MCKGVEQDETQAAVR---QQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPS
        MC+G E++E + +     Q+  TE        PV CELCG  A++YCEAD A+LC KCD+ VHSANFLA RH+R ++C TC+  T+R L+G +  VVLP 
Subjt:  MCKGVEQDETQAAVR---QQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPS

Query:  IVSRSSVETNFQNY
        I   + +E +  ++
Subjt:  IVSRSSVETNFQNY

Q39057 Zinc finger protein CONSTANS1.3e-0840Show/hide
Query:  QRTTEEVGGGGDDPVR-CELCGSRA-SLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGA
        ++ + ++G G ++  R C+ C S A ++YC AD AYLC  CD  VHSAN +A RH R  +C +C+     +L  A
Subjt:  QRTTEEVGGGGDDPVR-CELCGSRA-SLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGA

Q96502 Zinc finger protein CONSTANS-LIKE 22.9e-0844.29Show/hide
Query:  EEVGGGGDDPVRCELCGSRA-SLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGA
        EE    G     C+ C S A ++YCEAD AYLC  CD  VH+AN +A RH R  +C +C+S    +L  A
Subjt:  EEVGGGGDDPVRCELCGSRA-SLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGA

Q9LJB7 B-box zinc finger protein 323.7e-1150Show/hide
Query:  CELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG
        CELCG+ A L+C AD A+LC  CD   H++NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG

Q9LRM4 B-box domain protein 314.1e-1845.69Show/hide
Query:  MCKGVEQDETQAAVRQQRTTEEVGGGG--------DDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG-ASM
        MC+G+  +E++ +           GGG          PVRCELC   AS++CEAD A+LC KCD+ VH ANFLA RHVR +LC +CQ  T+R L+G    
Subjt:  MCKGVEQDETQAAVRQQRTTEEVGGGG--------DDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG-ASM

Query:  EVVLPSI--VSRSSVE
         VVLPS+  V  ++VE
Subjt:  EVVLPSI--VSRSSVE

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 322.6e-1250Show/hide
Query:  CELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG
        CELCG+ A L+C AD A+LC  CD   H++NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG

AT3G21890.1 B-box type zinc finger family protein2.9e-1945.69Show/hide
Query:  MCKGVEQDETQAAVRQQRTTEEVGGGG--------DDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG-ASM
        MC+G+  +E++ +           GGG          PVRCELC   AS++CEAD A+LC KCD+ VH ANFLA RHVR +LC +CQ  T+R L+G    
Subjt:  MCKGVEQDETQAAVRQQRTTEEVGGGG--------DDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG-ASM

Query:  EVVLPSI--VSRSSVE
         VVLPS+  V  ++VE
Subjt:  EVVLPSI--VSRSSVE

AT4G15248.1 B-box type zinc finger family protein4.0e-2144.74Show/hide
Query:  MCKGVEQDETQAAVR---QQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPS
        MC+G E++E + +     Q+  TE        PV CELCG  A++YCEAD A+LC KCD+ VHSANFLA RH+R ++C TC+  T+R L+G +  VVLP 
Subjt:  MCKGVEQDETQAAVR---QQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPS

Query:  IVSRSSVETNFQNY
        I   + +E +  ++
Subjt:  IVSRSSVETNFQNY

AT4G27310.1 B-box type zinc finger family protein4.0e-1356.86Show/hide
Query:  RCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHT
        +C+LC   A +YCE+D+A LC  CD  VH ANFL  +H RCLLC+ CQS T
Subjt:  RCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHT

AT5G54470.1 B-box type zinc finger family protein1.6e-1460.78Show/hide
Query:  RCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHT
        +CELC   A +YCE+D+A LC  CD  VH ANFL  +H+RCLLC+ CQSHT
Subjt:  RCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAAGGAGTAGAACAAGACGAAACCCAAGCCGCCGTCCGGCAGCAGCGGACCACCGAGGAGGTGGGGGGCGGCGGAGACGATCCAGTACGGTGCGAGCTGTGCGG
TTCGAGAGCGTCGCTATATTGCGAAGCCGACGAAGCGTATTTGTGCGGAAAGTGCGACAAGTCGGTTCACAGCGCGAATTTCTTGGCGCTGCGGCACGTGCGGTGCTTGC
TGTGCAACACGTGCCAGAGCCACACGCAACGCTATCTATTGGGAGCGTCCATGGAAGTTGTGCTTCCGAGTATTGTGAGTCGTTCATCGGTGGAGACGAATTTCCAGAAT
TACCACTGTGATTCAGATTATTTTGTTCGGAATTGCTCCCAAGTTTTGAAAATTCCTTGTCTCTTTCTGTAA
mRNA sequenceShow/hide mRNA sequence
GCCTTGACAATCAAGCTTCCAAGAAACAATTTTTTAAAGAAAAAGAAAAAAAAAAAAGATGTGCAAAGGAGTAGAACAAGACGAAACCCAAGCCGCCGTCCGGCAGCAGC
GGACCACCGAGGAGGTGGGGGGCGGCGGAGACGATCCAGTACGGTGCGAGCTGTGCGGTTCGAGAGCGTCGCTATATTGCGAAGCCGACGAAGCGTATTTGTGCGGAAAG
TGCGACAAGTCGGTTCACAGCGCGAATTTCTTGGCGCTGCGGCACGTGCGGTGCTTGCTGTGCAACACGTGCCAGAGCCACACGCAACGCTATCTATTGGGAGCGTCCAT
GGAAGTTGTGCTTCCGAGTATTGTGAGTCGTTCATCGGTGGAGACGAATTTCCAGAATTACCACTGTGATTCAGATTATTTTGTTCGGAATTGCTCCCAAGTTTTGAAAA
TTCCTTGTCTCTTTCTGTAATTTCCTCCTTTGGTGTTGTTTATTATTATCATTATAATTGAAAACGTCTCCAATTTTGTGAGATCGTGTCCTCTCTCCCACTCCTATCCT
TATTTTGTATTATTTATTTATTTATTTATTTTTTAAATGGTAT
Protein sequenceShow/hide protein sequence
MCKGVEQDETQAAVRQQRTTEEVGGGGDDPVRCELCGSRASLYCEADEAYLCGKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPSIVSRSSVETNFQN
YHCDSDYFVRNCSQVLKIPCLFL