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Clc02G01880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G01880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUbiquitin-like domain-containing protein
Genome locationClcChr02:1711731..1712063
RNA-Seq ExpressionClc02G01880
SyntenyClc02G01880
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589175.1 hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3673.79Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDG SLVDFG+RDGS IY+FFCPLDD   DDL+ARQLFF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

KGN43536.1 hypothetical protein Csa_020453 [Cucumis sativus]3.8e-3779.44Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAH---HNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFT-
        MKLVVQNLTGSLF+VEVEDDATV DLRTQI AH   HNLPS RLIFIPDHN +RLI   DDGISLVDFG+RDGSHIYIFF PL D+DGDD+EAR+ FFT 
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAH---HNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFT-

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

XP_022136124.1 uncharacterized protein LOC111007894 [Momordica charantia]7.9e-2761.4Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHN--LPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLD-----DNDGDDLE----
        MKL V+NLTGSLF+++V+DDATV DL+ +I+AHHN  LPSDRLIFI D N  R I   DDG SLVD GV+DGSHIYIFF PLD     D+ GDD +    
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHN--LPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLD-----DNDGDDLE----

Query:  ARQLFFTCPDLLLF
        +R  FFTC ++LLF
Subjt:  ARQLFFTCPDLLLF

XP_022930696.1 uncharacterized protein LOC111437093 [Cucurbita moschata]4.2e-3672.82Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDG SLVDFG+RDGS IY+FFCPLD+   DDL+ARQLFF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

XP_022989504.1 uncharacterized protein LOC111486561 [Cucurbita maxima]5.9e-3875.73Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDGISLVDFG+RDGS IYIFFCPLDD+ GDD++ARQLFF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

TrEMBL top hitse value%identityAlignment
A0A0A0K6V6 Ubiquitin-like domain-containing protein1.8e-3779.44Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAH---HNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFT-
        MKLVVQNLTGSLF+VEVEDDATV DLRTQI AH   HNLPS RLIFIPDHN +RLI   DDGISLVDFG+RDGSHIYIFF PL D+DGDD+EAR+ FFT 
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAH---HNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFT-

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

A0A2N9FN61 Ubiquitin-like domain-containing protein4.5e-2057.95Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDL
        M++VV+NLTG+LFY+E+ +DAT+ DL+ +I    NLPSDRLI I D NR   + D  DG+SLVD GV+DGSHIY+FF PLDD    D+
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDL

A0A6J1C3E5 uncharacterized protein LOC1110078943.8e-2761.4Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHN--LPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLD-----DNDGDDLE----
        MKL V+NLTGSLF+++V+DDATV DL+ +I+AHHN  LPSDRLIFI D N  R I   DDG SLVD GV+DGSHIYIFF PLD     D+ GDD +    
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHN--LPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLD-----DNDGDDLE----

Query:  ARQLFFTCPDLLLF
        +R  FFTC ++LLF
Subjt:  ARQLFFTCPDLLLF

A0A6J1ERN4 uncharacterized protein LOC1114370932.0e-3672.82Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDG SLVDFG+RDGS IY+FFCPLD+   DDL+ARQLFF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

A0A6J1JPI4 uncharacterized protein LOC1114865612.8e-3875.73Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL
        MKLV +NLTGSLFYVEV+D ATV DLRT+I++  +LPSDRL+F+PDH+R RLI   DDGISLVDFG+RDGS IYIFFCPLDD+ GDD++ARQLFF CPDL
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDL

Query:  LLF
        LLF
Subjt:  LLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32360.1 Ubiquitin-like superfamily protein3.6e-0939.74Show/hide
Query:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIF-IPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFF
        MK+ V+ +TG+    +V +DATV  ++ +I     LP  RLI  I D    RL+ + +D + L D GV + SHIY+FF
Subjt:  MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIF-IPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTCTGTTCTACGTCGAGGTTGAAGACGATGCGACTGTTTATGATCTTCGAACTCAGATCACTGCCCATCACAACCTCCC
TTCTGACCGTCTGATCTTCATTCCCGACCACAATCGTGACCGTCTGATCTGCGACGGCGATGATGGAATCTCGCTCGTTGATTTCGGTGTCCGAGATGGGTCCCACATTT
ACATCTTTTTCTGTCCGCTTGATGATAATGACGGCGATGATCTTGAAGCTCGCCAACTGTTCTTTACTTGTCCCGATCTTCTTCTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
AATTAATCTAAAATCGTAAGGATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTCTGTTCTACGTCGAGGTTGAAGACGATGCGACTGTTTATGATCTTCGAACTCAGAT
CACTGCCCATCACAACCTCCCTTCTGACCGTCTGATCTTCATTCCCGACCACAATCGTGACCGTCTGATCTGCGACGGCGATGATGGAATCTCGCTCGTTGATTTCGGTG
TCCGAGATGGGTCCCACATTTACATCTTTTTCTGTCCGCTTGATGATAATGACGGCGATGATCTTGAAGCTCGCCAACTGTTCTTTACTTGTCCCGATCTTCTTCTCTTT
TAG
Protein sequenceShow/hide protein sequence
MKLVVQNLTGSLFYVEVEDDATVYDLRTQITAHHNLPSDRLIFIPDHNRDRLICDGDDGISLVDFGVRDGSHIYIFFCPLDDNDGDDLEARQLFFTCPDLLLF