; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G01950 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G01950
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L6
Genome locationClcChr02:1770597..1773835
RNA-Seq ExpressionClc02G01950
SyntenyClc02G01950
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR002358 - Ribosomal protein L6, conserved site
IPR019906 - Ribosomal protein L6, bacterial-type
IPR020040 - Ribosomal protein L6, alpha-beta domain
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572299.1 50S ribosomal protein L6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-11390.13Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MAVSSTP L   SL+   NNFRSTFLGEKNGF +S MPV H G+LRKTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRM IP+G+QVKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_004144493.1 50S ribosomal protein L6, chloroplastic [Cucumis sativus]1.1e-12194.85Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS PSLQPP+ +H+PNNFRSTFLGEKNGF VSAMP CHIGLLRKTIECKESRIGKQPIQVPS+VTITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRM IPDGIQ+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_008455431.1 PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo]9.3e-12496.57Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS PSLQPPSL+H+PNNFRSTFLGEKNGF VSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRM IPDGIQ+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_022952947.1 50S ribosomal protein L6, chloroplastic-like [Cucurbita moschata]1.1e-11390.56Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MAVSSTP L   SL+   NNFRSTFLGEKNGF +S MPV H G+LRKTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRM IP+G+QVKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_038888704.1 50S ribosomal protein L6, chloroplastic [Benincasa hispida]3.5e-12395.28Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MAVSSTPSLQPPSLMHT NNFRSTFLGE+NGFYVSAMPVCHIG+LRKTIECKESRIGKQPI VPSNVTI+LQGQDLKVKGPLGELSILYPRE+KIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPV+M IPDGIQVKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0K3K9 Uncharacterized protein5.5e-12294.85Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS PSLQPP+ +H+PNNFRSTFLGEKNGF VSAMP CHIGLLRKTIECKESRIGKQPIQVPS+VTITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRM IPDGIQ+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A1S3C0W5 50S ribosomal protein L6, chloroplastic4.5e-12496.57Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS PSLQPPSL+H+PNNFRSTFLGEKNGF VSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRM IPDGIQ+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1C3Z5 50S ribosomal protein L6, chloroplastic7.4e-11193.02Show/hide
Query:  NNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMH
        +NFRSTFLGEKNGF VS MPVCHIGLLRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELSILYPREVKIEREDSGI++VKKA+ETRRA QMH
Subjt:  NNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMH

Query:  GLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRM IPDG+QVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEIVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEIVRRKEGKAGKKK

A0A6J1GLT4 50S ribosomal protein L6, chloroplastic-like5.5e-11490.56Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MAVSSTP L   SL+   NNFRSTFLGEKNGF +S MPV H G+LRKTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRM IP+G+QVKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1HVU0 50S ribosomal protein L6, chloroplastic-like7.9e-11389.7Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MAVSSTP L   SL+   NNFRSTFLGEKNGF +S MPV H G+LRKTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSI+YPREVKIEREDS
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        GI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPV M IP+G+QVKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

SwissProt top hitse value%identityAlignment
B0C1E7 50S ribosomal protein L64.4e-5259.22Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG
        SRIGK PI +P  V +T++GQ + VKGP GELS     EV IE+ D+ ++ V +  E+R A Q HGL RTL  NMV GVSKGFEKKLQ+ GVGYRA V+G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG

Query:  KDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
        ++L+LN+G+S+PV +  P+G+QV VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B1WQS5 50S ribosomal protein L62.9e-5155.87Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG
        SRIGK+PI +P+ VTI ++GQ + VKGP G L +  P EV + +E    ++V++  ++R A + HGLFRTL  NM+ GVS+GFEK+L + GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG

Query:  KDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV MT+P GI V VE NT++ VSG DK  +G  AA IR  RPPEPYKGKG++Y DE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B7KI01 50S ribosomal protein L61.9e-5055.31Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG
        SRIGK+PI +P+ VT+ + G  + VKGP GEL    P  V +E +D G+++V +  ++R A Q HGL RTL  NMV GVSKGFEK+L++ GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEG

Query:  KDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV M +P GI V VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  E+VRRK GK GKK
Subjt:  KDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

O23049 50S ribosomal protein L6, chloroplastic2.7e-9473.82Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA S   S QP          RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNVTI L+GQDLKVKGPLGEL++ YPREV++ +E+S
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        G ++VKK +ETRRANQMHGLFRTLTDNMVVGVSKGFEKKL L+GVGYRA V+GK+LVLNLGFSHPV+M IPD ++VKVEENTRITVSGYDK  IGQFAA+
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        +R+WRPPEPYKGKGVKY+DEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

P82193 50S ribosomal protein L6, chloroplastic4.8e-9174.54Show/hide
Query:  PNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQM
        P++ +S FLG K     S +PV  IG  RK+++CKESRIGKQPI VP+NV I ++GQDLKVKGPLGELSI YPREV +E+++SG ++V+KA+ETRRANQM
Subjt:  PNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQM

Query:  HGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKY
        HGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA VEGKDL+L+LGFSHPVRM IPD +QVKVEENT++TVSG DK  +GQFAA+IR WRPPEPYKGKGV+Y
Subjt:  HGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKY

Query:  ADEIVRRKEGKAGKKK
         DE+VRRKEGKAGKKK
Subjt:  ADEIVRRKEGKAGKKK

Arabidopsis top hitse value%identityAlignment
AT1G05190.1 Ribosomal protein L6 family1.9e-9573.82Show/hide
Query:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA S   S QP          RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNVTI L+GQDLKVKGPLGEL++ YPREV++ +E+S
Subjt:  MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS
        G ++VKK +ETRRANQMHGLFRTLTDNMVVGVSKGFEKKL L+GVGYRA V+GK+LVLNLGFSHPV+M IPD ++VKVEENTRITVSGYDK  IGQFAA+
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        +R+WRPPEPYKGKGVKY+DEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

AT2G18400.1 ribosomal protein L6 family protein3.5e-2044.9Show/hide
Query:  FEKKLQLIGVGYRAMVE--GKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK
        F + L+++GVGY+A  E  G+ L L LG+SH V + +P  ++V   +N  +  +G DK  + QFAA++R  +PPEPYKGKG+ Y DE+V++K+GK  K
Subjt:  FEKKLQLIGVGYRAMVE--GKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCTTCTACTCCTTCTCTTCAACCTCCAAGTTTGATGCACACACCTAACAATTTTCGGTCTACATTTTTGGGAGAGAAGAATGGATTCTATGTTTCTGCAAT
GCCTGTATGTCATATTGGTTTGTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAACGTAACCATCACATTGCAGGGTC
AGGATTTGAAAGTTAAGGGTCCTTTAGGAGAACTTTCAATTCTTTATCCACGAGAAGTGAAGATTGAGAGGGAAGATTCTGGGATCATAAAGGTTAAGAAAGCACTGGAG
ACAAGAAGAGCCAATCAAATGCATGGGCTTTTCAGAACGCTTACGGACAACATGGTGGTAGGAGTATCGAAGGGGTTTGAAAAGAAACTTCAATTGATCGGAGTTGGTTA
TCGAGCCATGGTAGAAGGAAAAGACTTGGTATTGAATCTTGGGTTCTCTCATCCAGTTAGAATGACCATACCTGATGGGATTCAAGTAAAGGTGGAAGAAAACACCAGAA
TTACAGTGAGTGGATATGATAAATGTGCTATTGGTCAGTTTGCTGCCTCTATTAGACAATGGAGACCACCAGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAA
ATTGTAAGAAGAAAGGAAGGAAAAGCAGGGAAGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTCTCTTCTACTCCTTCTCTTCAACCTCCAAGTTTGATGCACACACCTAACAATTTTCGGTCTACATTTTTGGGAGAGAAGAATGGATTCTATGTTTCTGCAAT
GCCTGTATGTCATATTGGTTTGTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAACGTAACCATCACATTGCAGGGTC
AGGATTTGAAAGTTAAGGGTCCTTTAGGAGAACTTTCAATTCTTTATCCACGAGAAGTGAAGATTGAGAGGGAAGATTCTGGGATCATAAAGGTTAAGAAAGCACTGGAG
ACAAGAAGAGCCAATCAAATGCATGGGCTTTTCAGAACGCTTACGGACAACATGGTGGTAGGAGTATCGAAGGGGTTTGAAAAGAAACTTCAATTGATCGGAGTTGGTTA
TCGAGCCATGGTAGAAGGAAAAGACTTGGTATTGAATCTTGGGTTCTCTCATCCAGTTAGAATGACCATACCTGATGGGATTCAAGTAAAGGTGGAAGAAAACACCAGAA
TTACAGTGAGTGGATATGATAAATGTGCTATTGGTCAGTTTGCTGCCTCTATTAGACAATGGAGACCACCAGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAA
ATTGTAAGAAGAAAGGAAGGAAAAGCAGGGAAGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MAVSSTPSLQPPSLMHTPNNFRSTFLGEKNGFYVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALE
TRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMTIPDGIQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADE
IVRRKEGKAGKKK