; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G02200 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G02200
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNase III domain-containing protein
Genome locationClcChr02:2035216..2039903
RNA-Seq ExpressionClc02G02200
SyntenyClc02G02200
Gene Ontology termsGO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR014720 - Double-stranded RNA-binding domain
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572281.1 Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-12183.82Show/hide
Query:  MEEIEQRVDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLR
        ME    R DLLK+EG  GGE+     +AASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLR
Subjt:  MEEIEQRVDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLR

Query:  AANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPM
        AANVDTEKLARVAITHGFHRYLRHNK DL QKIEEF+K+IE+YPLHSNG+IKAPK+LADIVES IGAVF DSNSIDTVW IFK LMEPLITL TMK+HPM
Subjt:  AANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPM

Query:  TELTEICQKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        TELTE+CQKRNLK EFVD WEE KEI V IDKQ VGKGSY KKLIAQNRAAKDALDN   +LG+FN+PCQPM
Subjt:  TELTEICQKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

KAG7011897.1 Ribonuclease 3-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-12185.23Show/hide
Query:  DLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK
        DLLK+EG  GGE+     +AASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEK
Subjt:  DLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK

Query:  LARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQ
        LARVAITHGFHRYLRHNK DL QKIEEF+K+IE+YPLHSNG+IKAPK+LADIVES IGAVF DSNSIDTVW IFK LMEPLITL TMK+HPMTELTE+CQ
Subjt:  LARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQ

Query:  KRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        KRNLK EFVD WEE KEI V IDKQ VGKGSY KKLIAQNRAAKDALDN   +LG+FN+PCQPM
Subjt:  KRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

XP_004144598.1 ribonuclease 3-like protein 3 [Cucumis sativus]3.5e-13088Show/hide
Query:  MEEIEQRVDLLK-EEGS--SGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT
        MEE ++RVD L+ ++GS   GGEAVNG DS ASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT
Subjt:  MEEIEQRVDLLK-EEGS--SGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT

Query:  RLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKK
        RLRAANVDTEKLARVAITHGFHRYLRHNK DLHQKIEEF +SIE+YPLHSNGMIKAPKVLADIVESTIGAVFADSN IDTVWKIFK+LMEPLITL TMKK
Subjt:  RLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKK

Query:  HPMTELTEICQKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        HPMTELTE+CQKR+LKLEF DRWEETKEIEV I+KQ VGKGSYRKKLIAQNRAAK+AL+NLD    +FNQPCQPM
Subjt:  HPMTELTEICQKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

XP_022969213.1 ribonuclease 3-like protein 3 [Cucurbita maxima]7.7e-12285.28Show/hide
Query:  VDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTE
        VDLLK+EG        G  +AASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTE
Subjt:  VDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTE

Query:  KLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEIC
        KLARVAITHGFHRYLRHNK DL QKIEEF+K+IE+YPLHSNGMIKAPK+LADIVES IGAVF DSNSIDTVW IFK LMEPLITL TMK+HPMTELTE+C
Subjt:  KLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEIC

Query:  QKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        QKRNLK EFVD WEE KEI V IDKQ VGKGSY KKLIAQNRAAKDALDN   +LG+FN+PCQPM
Subjt:  QKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

XP_038888348.1 ribonuclease 3-like protein 3 [Benincasa hispida]1.8e-13994.14Show/hide
Query:  MEEIEQRVDLLKEEGSS-GGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
        MEE EQRV  L+EEGSS GGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
Subjt:  MEEIEQRVDLLKEEGSS-GGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL

Query:  RAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHP
        RAANVDTEKLARVAITHGFHRYLRHNKPDLH KIEEF KSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSI+TVWKIFKDLMEPLITL TMKKHP
Subjt:  RAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHP

Query:  MTELTEICQKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        MTELTEICQKRNL LEFVD WEE KE++VFIDKQ VGKGSYRKKLIAQNRAAKDAL+NLDRVLGEFNQPCQPM
Subjt:  MTELTEICQKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

TrEMBL top hitse value%identityAlignment
A0A0A0K1J8 RNase III domain-containing protein1.7e-13088Show/hide
Query:  MEEIEQRVDLLK-EEGS--SGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT
        MEE ++RVD L+ ++GS   GGEAVNG DS ASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT
Subjt:  MEEIEQRVDLLK-EEGS--SGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT

Query:  RLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKK
        RLRAANVDTEKLARVAITHGFHRYLRHNK DLHQKIEEF +SIE+YPLHSNGMIKAPKVLADIVESTIGAVFADSN IDTVWKIFK+LMEPLITL TMKK
Subjt:  RLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKK

Query:  HPMTELTEICQKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        HPMTELTE+CQKR+LKLEF DRWEETKEIEV I+KQ VGKGSYRKKLIAQNRAAK+AL+NLD    +FNQPCQPM
Subjt:  HPMTELTEICQKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

A0A1Q3BNT8 Ribonuclease_3 domain-containing protein (Fragment)4.5e-8367.09Show/hide
Query:  LDGIEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDL
        L+G+E IL Y+F +K LLEEAFT ASY SP+ C+S+ERLE+VGDSVLN L T+EQYF  PNL PG LTRLRAANVDTEKLARV+I HG HRYL H KP L
Subjt:  LDGIEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDL

Query:  HQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFVDRWEETKEIEV
         Q+I+EF ++I DYPLHSNG++  PKVLADIVESTIGAVF DSN SID VWK+FK L+EP+I++ T+K+HP+TEL E+CQK+NLK++FVD W+E+   EV
Subjt:  HQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFVDRWEETKEIEV

Query:  FIDKQPVGKGSY-RKKLIAQNRAAKDALDNLDRVLGE
        FID Q VG+ +Y  KK IA NRAAKDAL+N+ ++L E
Subjt:  FIDKQPVGKGSY-RKKLIAQNRAAKDALDNLDRVLGE

A0A6J1C375 ribonuclease 3-like protein 38.9e-11684.21Show/hide
Query:  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        +S  SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
Subjt:  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFVDRWEETKE
        K DL +KIEEFA+ +++YPLHSNG+IKAPK+LADIVESTIGAVF DSNS+DTVW IF+ LMEPLITL T+K+HPMTELTEICQKRNLKLEFVD WE+TKE
Subjt:  KPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFVDRWEETKE

Query:  IEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        ++VFIDKQ VGKGSYRKKLIAQNRAAKDAL+NLD +L + NQPCQPM
Subjt:  IEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

A0A6J1GKQ4 ribonuclease 3-like protein 37.1e-12184.85Show/hide
Query:  DLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK
        DLLK+EG  GGE+     +AASLDG+EAIL YEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEK
Subjt:  DLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK

Query:  LARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQ
        LARVAITHGFHRYLRHNK DL QKIEEF+K+IE+YPLHSNG+IKAPK+LADIVES IGAVF DSNSIDTVW IFK LMEPLITL TMK+HPMTELTE+CQ
Subjt:  LARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQ

Query:  KRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        KRNLK EFVD WEE KEI V IDKQ VGKGSY KKLIAQNRAAKDALDN   +LG+FN+PCQPM
Subjt:  KRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

A0A6J1I0C1 ribonuclease 3-like protein 33.7e-12285.28Show/hide
Query:  VDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTE
        VDLLK+EG        G  +AASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTE
Subjt:  VDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTE

Query:  KLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEIC
        KLARVAITHGFHRYLRHNK DL QKIEEF+K+IE+YPLHSNGMIKAPK+LADIVES IGAVF DSNSIDTVW IFK LMEPLITL TMK+HPMTELTE+C
Subjt:  KLARVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEIC

Query:  QKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM
        QKRNLK EFVD WEE KEI V IDKQ VGKGSY KKLIAQNRAAKDALDN   +LG+FN+PCQPM
Subjt:  QKRNLKLEFVDRWEETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM

SwissProt top hitse value%identityAlignment
Q69KJ0 Ribonuclease 3-like protein 31.0e-6050.85Show/hide
Query:  IEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQ
        +E++L YEFRDK L+EEA T  S  Y      ++ERLEY+GD+VL  +++RE + +   L PG LTRLRAANVD EKLARVA+ HG H +LRH  P+L  
Subjt:  IEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQ

Query:  KIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFV-DRWEETKEIEVF
        +I +F + +  YP+HSNG++  PKVL D+VES IGA++ DSN + + VW++F+ L +PLI+L T+ KHP++EL E CQK    ++ V D W++   +EV 
Subjt:  KIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFV-DRWEETKEIEVF

Query:  IDKQPVGKGSY-RKKLIAQNRAAKDALDNLDRVLGE
        ID + VG+ +Y +KK IAQNRAAK ALD L   LG+
Subjt:  IDKQPVGKGSY-RKKLIAQNRAAKDALDNLDRVLGE

Q6ATG6 Ribonuclease 3-like protein 21.1e-4140.33Show/hide
Query:  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        D A +   +E +L Y+FRD RLLEEA T  S++ ++  S++RLE+VGDS L    +   Y +NP L PG L+ LRAAN+ TEKLARVA+ H  +  LR N
Subjt:  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KPDLHQKIEEFAKSIEDYP-------LHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFV
         P L   + +F ++++  P        +   ++KAPKVLADIVE+   AV+ D    ++ +WK+ + L EP+IT  T+ + P+T L E+CQK     +F 
Subjt:  KPDLHQKIEEFAKSIEDYP-------LHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFV

Query:  DRWEE--TKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNL
          W++     + VF+  + VG GS  +K+IA+  AA+DA   L
Subjt:  DRWEE--TKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNL

Q8LMR2 Endoribonuclease Dicer homolog 13.7e-4242.31Show/hide
Query:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDL
        + D ++ +L  EF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H +LRH    L
Subjt:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDL

Query:  HQKIEEFAKSIEDYPLHSN------GMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEF-VDRWE
          +I EF K +++  L         G  KAPKVL DIVES  GA+F DS      VWK+F+ L+ P++T  T+  HP+ EL E CQ++   LE+   R  
Subjt:  HQKIEEFAKSIEDYPLHSN------GMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEF-VDRWE

Query:  ETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDAL
            +EVF+D   +G     +K +AQ  AA++AL
Subjt:  ETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDAL

Q9LTQ0 Ribonuclease 3-like protein 22.2e-4239.17Show/hide
Query:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDL
        S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y + P+L P  L+ LRAANV TEKLARV++ HG + +LR N P L
Subjt:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDL

Query:  HQKIEEFAKSI---EDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKK--HPMTELTEICQKRNLKLEFVDRWEE-
         +K++EF++++   +D  +   G++KAPKVLAD+ ES  GAV+ D N  +  +W IF+ L+EP++TL+ ++K   P++ L ++C K   +++ +  W++ 
Subjt:  HQKIEEFAKSI---EDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKK--HPMTELTEICQKRNLKLEFVDRWEE-

Query:  -TKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRV
              +++D + +  G    K IA+  AAK+AL  L  V
Subjt:  -TKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRV

Q9SP32 Endoribonuclease Dicer homolog 11.4e-4445.02Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH    L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQK

Query:  IEEFAKSIE------DYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDT-VWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEF-VDRWEETK
        I EF K ++       +     G  KAPKVL DIVES  GA+F DS    T  WK+F+ L++P++T  T+  HP+ EL E CQ++   LE+   R   T 
Subjt:  IEEFAKSIE------DYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDT-VWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEF-VDRWEETK

Query:  EIEVFIDKQPVGKGSYRKKLIAQNRAAKDAL
         +EVFID   VG     +K +AQ  AA++AL
Subjt:  EIEVFIDKQPVGKGSYRKKLIAQNRAAKDAL

Arabidopsis top hitse value%identityAlignment
AT1G01040.1 dicer-like 19.6e-4645.02Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH    L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQK

Query:  IEEFAKSIE------DYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDT-VWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEF-VDRWEETK
        I EF K ++       +     G  KAPKVL DIVES  GA+F DS    T  WK+F+ L++P++T  T+  HP+ EL E CQ++   LE+   R   T 
Subjt:  IEEFAKSIE------DYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDT-VWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEF-VDRWEETK

Query:  EIEVFIDKQPVGKGSYRKKLIAQNRAAKDAL
         +EVFID   VG     +K +AQ  AA++AL
Subjt:  EIEVFIDKQPVGKGSYRKKLIAQNRAAKDAL

AT1G01040.2 dicer-like 19.6e-4645.02Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH    L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQK

Query:  IEEFAKSIE------DYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDT-VWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEF-VDRWEETK
        I EF K ++       +     G  KAPKVL DIVES  GA+F DS    T  WK+F+ L++P++T  T+  HP+ EL E CQ++   LE+   R   T 
Subjt:  IEEFAKSIE------DYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDT-VWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEF-VDRWEETK

Query:  EIEVFIDKQPVGKGSYRKKLIAQNRAAKDAL
         +EVFID   VG     +K +AQ  AA++AL
Subjt:  EIEVFIDKQPVGKGSYRKKLIAQNRAAKDAL

AT3G03300.1 dicer-like 22.7e-3242.25Show/hide
Query:  IEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQK
        +E++LNY F DK LL EA T  SY  PE    ++RLE++GDSVL++LIT+  Y   P LSPG LT +R+A+V+ E  A VA+    H+++ +    LH+ 
Subjt:  IEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDLHQK

Query:  IEEFAKSIEDYPLHS----NGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKL
        I       E   L S       I  PKVL D++ES  GA+F DS  + + V+   K L+  +IT  T+K HP+ ELTE+CQK   +L
Subjt:  IEEFAKSIEDYPLHS----NGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKL

AT3G20420.1 RNAse THREE-like protein 21.5e-4339.17Show/hide
Query:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDL
        S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y + P+L P  L+ LRAANV TEKLARV++ HG + +LR N P L
Subjt:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKPDL

Query:  HQKIEEFAKSI---EDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKK--HPMTELTEICQKRNLKLEFVDRWEE-
         +K++EF++++   +D  +   G++KAPKVLAD+ ES  GAV+ D N  +  +W IF+ L+EP++TL+ ++K   P++ L ++C K   +++ +  W++ 
Subjt:  HQKIEEFAKSI---EDYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKDLMEPLITLNTMKK--HPMTELTEICQKRNLKLEFVDRWEE-

Query:  -TKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRV
              +++D + +  G    K IA+  AAK+AL  L  V
Subjt:  -TKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRV

AT4G15417.1 RNAse II-like 14.0e-6854.58Show/hide
Query:  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        D    ++ +E ILNY+F+DK LL +AFTDASY  +   S+E LE +GDS+LN  I  +     P  +PG LT+LRA NVDTEKLARVA+ H  + YLRH 
Subjt:  DSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFVDRWEETKE
        KP L ++I EF +++E YPLHSNG++K PKVLADIVESTIGA+F D NS +TVWK+ K L+EP+I L+ MK HPMTEL E+CQKRNLKL   D WEE + 
Subjt:  KPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFVDRWEETKE

Query:  IEVFIDKQPVGKGSYR-KKLIAQNRAAKDALDNLDRVLGE
            I+ + VG G +  KK  A+N AAK+A+DN  +  G+
Subjt:  IEVFIDKQPVGKGSYR-KKLIAQNRAAKDALDNLDRVLGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATCGAGCAGAGAGTCGACTTATTGAAAGAGGAAGGCAGCAGCGGCGGAGAGGCGGTCAACGGCGGCGATTCGGCGGCGAGTCTGGACGGAATTGAAGCGAT
TCTGAACTACGAGTTTCGAGACAAAAGATTACTGGAGGAGGCTTTTACAGACGCATCGTATTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTATGTCGGAGATT
CGGTGTTGAATTTTCTGATAACGAGAGAACAATATTTCTCGAATCCGAATCTGTCGCCGGGTTCCCTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCT
CGAGTTGCAATTACGCATGGATTTCATCGATATCTTCGCCACAACAAACCTGATCTTCATCAAAAAATAGAAGAGTTTGCTAAAAGTATAGAGGATTATCCATTGCATTC
CAATGGAATGATCAAAGCTCCAAAAGTTCTAGCCGACATTGTTGAATCAACCATTGGAGCAGTTTTTGCTGATAGCAACTCCATTGACACGGTTTGGAAGATATTTAAGG
ATTTAATGGAGCCATTGATAACGTTGAATACTATGAAGAAACATCCAATGACAGAGTTGACAGAAATATGTCAAAAGAGAAATCTAAAGTTGGAATTTGTGGATCGTTGG
GAAGAAACAAAAGAGATTGAAGTTTTCATTGACAAACAACCTGTAGGAAAAGGAAGCTATCGCAAAAAGCTTATTGCGCAAAATAGAGCTGCAAAAGATGCTTTGGACAA
CTTGGACAGAGTTCTTGGGGAATTTAATCAACCTTGTCAACCTATGTAA
mRNA sequenceShow/hide mRNA sequence
AGCGTAGGAGAAGAGAAAAAAAAGAAAAAAAAAAGGAAAAGAAAAGAAAAATTCCTCGCAGTGAACGAAATAAAATTAAAATTTGGTTCCAAAATCCCCAAAGTTCCGGC
ATGGAAGAAATCGAGCAGAGAGTCGACTTATTGAAAGAGGAAGGCAGCAGCGGCGGAGAGGCGGTCAACGGCGGCGATTCGGCGGCGAGTCTGGACGGAATTGAAGCGAT
TCTGAACTACGAGTTTCGAGACAAAAGATTACTGGAGGAGGCTTTTACAGACGCATCGTATTCACCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTATGTCGGAGATT
CGGTGTTGAATTTTCTGATAACGAGAGAACAATATTTCTCGAATCCGAATCTGTCGCCGGGTTCCCTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCT
CGAGTTGCAATTACGCATGGATTTCATCGATATCTTCGCCACAACAAACCTGATCTTCATCAAAAAATAGAAGAGTTTGCTAAAAGTATAGAGGATTATCCATTGCATTC
CAATGGAATGATCAAAGCTCCAAAAGTTCTAGCCGACATTGTTGAATCAACCATTGGAGCAGTTTTTGCTGATAGCAACTCCATTGACACGGTTTGGAAGATATTTAAGG
ATTTAATGGAGCCATTGATAACGTTGAATACTATGAAGAAACATCCAATGACAGAGTTGACAGAAATATGTCAAAAGAGAAATCTAAAGTTGGAATTTGTGGATCGTTGG
GAAGAAACAAAAGAGATTGAAGTTTTCATTGACAAACAACCTGTAGGAAAAGGAAGCTATCGCAAAAAGCTTATTGCGCAAAATAGAGCTGCAAAAGATGCTTTGGACAA
CTTGGACAGAGTTCTTGGGGAATTTAATCAACCTTGTCAACCTATGTAATCTACACACACACACATATAATAACTATAAACTTTGTAATTAGTTTTTTCGCTTATTAATT
AATACATTTTTTTAAAGAAATATCATTTTGGTCATTATTTGTTCGTCC
Protein sequenceShow/hide protein sequence
MEEIEQRVDLLKEEGSSGGEAVNGGDSAASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLA
RVAITHGFHRYLRHNKPDLHQKIEEFAKSIEDYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDTVWKIFKDLMEPLITLNTMKKHPMTELTEICQKRNLKLEFVDRW
EETKEIEVFIDKQPVGKGSYRKKLIAQNRAAKDALDNLDRVLGEFNQPCQPM