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Clc02G02230 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G02230
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:2055836..2056362
RNA-Seq ExpressionClc02G02230
SyntenyClc02G02230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4274154.1 unnamed protein product [Prunus armeniaca]7.7e-0447.37Show/hide
Query:  MTHFHLRLVLPIFLLLLLTSTTATTAV-AAFQPRIPMRKQVIFRP--SSPSVHKYTGFEEQKRRVPTGSNPLHNKR
        M  F L L   +F LLL  + T   A+  +F    P R Q +FRP  S+PS  +   F+ +KRRVPTGSNPLHNKR
Subjt:  MTHFHLRLVLPIFLLLLLTSTTATTAV-AAFQPRIPMRKQVIFRP--SSPSVHKYTGFEEQKRRVPTGSNPLHNKR
KAG6572280.1 hypothetical protein SDJN03_29008, partial [Cucurbita argyrosperma subsp. sororia]8.5e-1978.08Show/hide
Query:  MTHFHLRLVLPIFLLLLLTSTTATTAVAAFQPRIPMRKQVIFRPSSPSVHKYTGFEEQKRRVPTGSNPLHNKR
        MTHFHL LVL IFLLL  T TTAT A AA QPRI MRKQV+FRP SPS +K+T +EEQKRRVPTGSNPLHNKR
Subjt:  MTHFHLRLVLPIFLLLLLTSTTATTAVAAFQPRIPMRKQVIFRPSSPSVHKYTGFEEQKRRVPTGSNPLHNKR
KAG6589151.1 hypothetical protein SDJN03_17716, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1371.88Show/hide
Query:  MTHFHLRLVLPIFLLLLLTSTTATTAVAAFQPRIPMRKQVIFRPSSPSVHKYTGFEEQKRRVPT
        MTHFHLRL+LPI LLLL  +T AT A AA +PRI +RKQVIFRPSSPS  K   FE+QKRRVPT
Subjt:  MTHFHLRLVLPIFLLLLLTSTTATTAVAAFQPRIPMRKQVIFRPSSPSVHKYTGFEEQKRRVPT
TrEMBL top hitse value%identityAlignment
A0A2J6LEB3 Uncharacterized protein6.4e-0443.84Show/hide
Query:  MTHFHLRLVLPIFLLLLLTSTTATTAVAAFQPRIPMRKQVIFRPSSPSVHKYTGFEEQKRRVPTGSNPLHNKR
        MTHFH+ + L IFL    T+TT  T+ + F P  P     +F  S            +KRRVPTG NPLHNKR
Subjt:  MTHFHLRLVLPIFLLLLLTSTTATTAVAAFQPRIPMRKQVIFRPSSPSVHKYTGFEEQKRRVPTGSNPLHNKR
A0A6J5UFG2 Uncharacterized protein3.7e-0447.37Show/hide
Query:  MTHFHLRLVLPIFLLLLLTSTTATTAV-AAFQPRIPMRKQVIFRP--SSPSVHKYTGFEEQKRRVPTGSNPLHNKR
        M  F L L   +F LLL  + T   A+  +F    P R Q +FRP  S+PS  +   F+ +KRRVPTGSNPLHNKR
Subjt:  MTHFHLRLVLPIFLLLLLTSTTATTAV-AAFQPRIPMRKQVIFRP--SSPSVHKYTGFEEQKRRVPTGSNPLHNKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACAGTGTTTCCATATGCAGAAGAACAGAACTCCCCATCTTATATATCACAAATCTGGACGGCTACAAATCCAACCATTTTATTTACTTCATTTTCCTTTCAGAA
CATGACTCATTTCCACCTCCGTCTTGTTCTTCCCATTTTTCTTCTTCTTCTTCTAACTTCCACCACCGCCACCACCGCCGTCGCCGCCTTCCAGCCAAGGATTCCGATGA
GAAAACAAGTGATTTTCCGGCCGTCTTCACCGTCGGTACACAAATATACAGGCTTTGAAGAACAAAAGCGAAGAGTCCCCACAGGATCAAACCCTTTACACAACAAACGG
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTACAGTGTTTCCATATGCAGAAGAACAGAACTCCCCATCTTATATATCACAAATCTGGACGGCTACAAATCCAACCATTTTATTTACTTCATTTTCCTTTCAGAA
CATGACTCATTTCCACCTCCGTCTTGTTCTTCCCATTTTTCTTCTTCTTCTTCTAACTTCCACCACCGCCACCACCGCCGTCGCCGCCTTCCAGCCAAGGATTCCGATGA
GAAAACAAGTGATTTTCCGGCCGTCTTCACCGTCGGTACACAAATATACAGGCTTTGAAGAACAAAAGCGAAGAGTCCCCACAGGATCAAACCCTTTACACAACAAACGG
TGATTATTATTTCACAAAGCTTACGAAATTAAAAGTATCAATTTTTTTTCTTCTAAATTTACCCACTTTATTTTTTATTTTTCATCCCCAAGATAAATTGGGTTCTTTAG
GATTTGTATTTAATTTTAATTTATATATGGTAGTTTTGAATAATAGAGAAGTTTTTAGATAGAGTGAGAAGTTGATAAATGGTGAAG
Protein sequenceShow/hide protein sequence
MLTVFPYAEEQNSPSYISQIWTATNPTILFTSFSFQNMTHFHLRLVLPIFLLLLLTSTTATTAVAAFQPRIPMRKQVIFRPSSPSVHKYTGFEEQKRRVPTGSNPLHNKR