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Clc02G02480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G02480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationClcChr02:2273160..2274745
RNA-Seq ExpressionClc02G02480
SyntenyClc02G02480
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023554650.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]3.4e-3286.02Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFAARAI RSS GKAATLLSVGARAAPARSPF +ASKRP S+C+VR+PVEMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

XP_023554651.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]5.9e-3289.89Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFAARAI RSS GKAATLLSVGARAAPARSPF +ASKRP S+C+VR+PVEMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV

XP_038887455.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]1.4e-3388.17Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMS CVESMLPFHSATSSALM SMLSVSRH+YGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

XP_038887456.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida]2.4e-3392.13Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMS CVESMLPFHSATSSALM SMLSVSRH+YGWLSEV
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV

XP_038887457.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]5.3e-3392.05Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMS CVESMLPFHSATSSALM SMLSVSRH+YGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

TrEMBL top hitse value%identityAlignment
A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.1e-3184.95Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFAARAIFRSSSGK ATLLS GARAAPARSPF +ASKRPFS  S RIP+EMS CVESMLPFHSATSSALMTSMLSVS HSYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 61.8e-3189.77Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSGKAATLLS GARAAPARSPF +ASKRPFS  S RIP+EMS CVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 61.8e-3189.77Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSGKAATLLS GARAAPARSPF +ASKRPFS  S RIP+EMS CVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A6J1GM36 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.4e-3183.87Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFAARAI RSS GKAATLLSVG+RAAPARS F +A+KRPFS+C+VR+PVEMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.4e-3183.87Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFAARAI RSS G+AATLLSVG+RAAPARS F +ASKRPFS+C+VR+PVEMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial2.9e-1047.67Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+S CVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein6.1e-1145.98Show/hide
Query:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++FRS++ +A++     S G +  P  AR+ F +  + P +    R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWL

AT1G28395.2 unknown protein6.1e-1145.98Show/hide
Query:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++FRS++ +A++     S G +  P  AR+ F +  + P +    R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWL

AT2G20585.1 nuclear fusion defective 62.1e-1147.67Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+S CVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.2 nuclear fusion defective 62.1e-1147.67Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+S CVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.3 nuclear fusion defective 62.1e-1147.67Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+S CVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTGGCGTTGC
TTCTAAACGACCTTTCTCTAAGTGCTCTGTAAGGATTCCAGTTGAAATGAGCGTCTGCGTGGAGTCCATGCTTCCATTCCATTCTGCAACTTCTTCGGCATTGATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGTACAGCCGATGGAGGATGTAATATGTGTGATATACACAATTGACCCTATATTTTTGGCCCTTAGA
ATGAAAGATGAAAAGGAGGAGGATGAAATAGTGAAAGGGAAGGGGCGGAAAGTTTTGTGTGCAGAGTTCTACATTGTGACAGTGGCCGCTGCTAAATTTCGCGAGCTGAT
CCGCTGGAATTTGGTTTTCCATGTGTTGGCTTTCAGTCTAGTTTGCATGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTGGCGTTGC
TTCTAAACGACCTTTCTCTAAGTGCTCTGTAAGGATTCCAGTTGAAATGAGCGTCTGCGTGGAGTCCATGCTTCCATTCCATTCTGCAACTTCTTCGGCATTGATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGTACAGCCGATGGAGGATGTAATATGTGTGATATACACAATTGACCCTATATTTTTGGCCCTTAGA
ATGAAAGATGAAAAGGAGGAGGATGAAATAGTGAAAGGGAAGGGGCGGAAAGTTTTGTGTGCAGAGTTCTACATTGTGACAGTGGCCGCTGCTAAATTTCGCGAGCTGAT
CCGCTGGAATTTGGTTTTCCATGTGTTGGCTTTCAGTCTAGTTTGCATGTCTTAG
Protein sequenceShow/hide protein sequence
MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSVCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPMEDVICVIYTIDPIFLALR
MKDEKEEDEIVKGKGRKVLCAEFYIVTVAAAKFRELIRWNLVFHVLAFSLVCMS