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Clc02G02530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G02530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationClcChr02:2295915..2296328
RNA-Seq ExpressionClc02G02530
SyntenyClc02G02530
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645727.1 hypothetical protein Csa_020381 [Cucumis sativus]8.3e-5686.13Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILD TTIVNFVEDEAAF+AYIR +F +LDT+HDGLLSYNE+LEELQSLRVF+ DFG DEK  PDELSSVYSSLFLQFDRD DG V+LD YKTE KR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+GFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_008455501.1 PREDICTED: uncharacterized protein LOC103495653 [Cucumis melo]3.6e-5989.78Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILDSTTIVNFVEDEAAF+AYIRDRF +LDTNHDGLLSYNE+LEELQSLRVFE DFG D+K DPDELSSVYSSLFLQFDRD DG V+LD YKTE KR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+GFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_011658679.1 uncharacterized protein LOC105436072 [Cucumis sativus]8.3e-5686.13Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILD TTIVNFVEDEAAF+AYIR +F +LDT+HDGLLSYNE+LEELQSLRVF+ DFG DEK  PDELSSVYSSLFLQFDRD DG V+LD YKTE KR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+GFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_038887952.1 uncharacterized protein LOC120077919 [Benincasa hispida]1.1e-6091.24Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILDSTTIVNFVEDEAAF+AYIRDRF++LDTNHDG LSYNE+LEELQSLRVFETDFG DEK DP+ELSSVYSSLFLQFDRD DGTV+LDE+KTETKR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+GFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]3.7e-5685.4Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILDS TIVNFVED+ AF A+IRDRF +LDTNHDGLLSY E+LEEL +LRVFET FGID KPDPDELSSVYSSLFLQFDRD  GTV+LDE+  ETKR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

TrEMBL top hitse value%identityAlignment
A0A0A0K3B2 Uncharacterized protein4.0e-5686.13Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILD TTIVNFVEDEAAF+AYIR +F +LDT+HDGLLSYNE+LEELQSLRVF+ DFG DEK  PDELSSVYSSLFLQFDRD DG V+LD YKTE KR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+GFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A0A0KHT7 Uncharacterized protein5.2e-5684.67Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILDS TIVNFVED+ AF A+IRDRF +LDTN DGLLSY+E+LEEL +LRVFET FGID KPDPDELSSVYSSLFLQFDRD  GTV+LDE++ ETKR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A1S3C175 uncharacterized protein LOC1034956531.7e-5989.78Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILDSTTIVNFVEDEAAF+AYIRDRF +LDTNHDGLLSYNE+LEELQSLRVFE DFG D+K DPDELSSVYSSLFLQFDRD DG V+LD YKTE KR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+GFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A5A7UT84 Calcium-binding EF-hand family protein1.7e-5989.78Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILDSTTIVNFVEDEAAF+AYIRDRF +LDTNHDGLLSYNE+LEELQSLRVFE DFG D+K DPDELSSVYSSLFLQFDRD DG V+LD YKTE KR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+GFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A5D3E445 Calcium-binding EF-hand family protein1.5e-5583.94Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        MSVEILDS TIVNFVED+ AF A+IRDRF +LDTNHDGLLSY+E+LEEL +LRVFET FGID KPDP+ELSSVYSSLFLQFD D  GTV+LDE+K ETKR
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein5.6e-1030.47Show/hide
Query:  ILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLA
        ++ S T++ F+ D  +F +   D F  LD + +G+LS +EL + L ++   E+     E    DE  +VY+++F +F  DL        ++     ++ A
Subjt:  ILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLA

Query:  MANGMGFLPVQMVLEEGSFLMKAVERET
        MA G+G  PV MV+     +MKAV  E+
Subjt:  MANGMGFLPVQMVLEEGSFLMKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein1.6e-2540.74Show/hide
Query:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR
        M V ++D +T+ +FV+DE  F   + +RF  LD N DG+LS +EL +  +S+R+ E+ FG+D     DEL+++Y S+F +FD D  G+V+L+E+++E K+
Subjt:  MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKR

Query:  MMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA
        ++LA+A+G+G  P+ MVL  ++ +FL KA + E +
Subjt:  MMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA

AT4G38810.2 Calcium-binding EF-hand family protein1.3e-0625.6Show/hide
Query:  EILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMML
        ++LD + IV  VE+E  F  ++  +F  LD + DG LS  EL   +  +       G+  +    +   +YS +  +F       V+  E+K     ++L
Subjt:  EILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMML

Query:  AMANGMGFLPVQMVLEEGSFLMKAV
         MA G+   P+ ++  +G  L + V
Subjt:  AMANGMGFLPVQMVLEEGSFLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAAATATTGGACAGTACGACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCAATTACCTCGACACTAACCATGA
TGGTCTCCTTTCCTATAATGAGCTACTGGAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTCGGAATTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCAGTGT
ATAGTTCTCTGTTTTTGCAATTCGATCGTGACTTGGATGGAACGGTTAATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCTATGGCTAATGGGATGGGT
TTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGAAATATTGGACAGTACGACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCAATTACCTCGACACTAACCATGA
TGGTCTCCTTTCCTATAATGAGCTACTGGAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTCGGAATTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCAGTGT
ATAGTTCTCTGTTTTTGCAATTCGATCGTGACTTGGATGGAACGGTTAATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCTATGGCTAATGGGATGGGT
TTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA
Protein sequenceShow/hide protein sequence
MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMG
FLPVQMVLEEGSFLMKAVERETAIMAA