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Clc02G02540 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G02540
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationClcChr02:2303436..2304090
RNA-Seq ExpressionClc02G02540
SyntenyClc02G02540
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645727.1 hypothetical protein Csa_020381 [Cucumis sativus]4.3e-6090.7Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLR+LETHFGIDTKPDP+ELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVD
        MMLAMANGIG SPVQMLLEEN   K +V+
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVD

XP_004144527.1 uncharacterized protein LOC101208564 [Cucumis sativus]9.5e-6894.93Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLR+LETHFGIDTKPDP+ELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA
        MMLAMANGIG SPVQMLLEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA

XP_008455503.1 PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]2.8e-6794.93Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLR+ ETHFGIDTKPDP+ELSSVY SLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA
        MMLAMANGIG SPVQMLLEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA

XP_022930660.1 uncharacterized protein LOC111437061 [Cucurbita moschata]1.4e-5885.19Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVED+E F   +RERFSHLD+D DGVL Y EML+ELQSLR+ ETHFGID KPDPDELSSVYGSLFLQFDRDC+GKVD+GEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKL
        MM+AMANGIGFSPVQM+LEENSFLKKAV+RESTK+
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKL

XP_038888629.1 uncharacterized protein LOC120078427 [Benincasa hispida]3.1e-6694.93Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFS  IRERFSHLD+DRDGVLCYGEMLKELQSLR+LETHFGIDTKPDPDELSSVYGSLF QFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA
        MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein4.6e-6894.93Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLR+LETHFGIDTKPDP+ELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA
        MMLAMANGIG SPVQMLLEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA

A0A1S3C1T0 uncharacterized protein LOC1034956551.3e-6794.93Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLR+ ETHFGIDTKPDP+ELSSVY SLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA
        MMLAMANGIG SPVQMLLEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA

A0A5D3DDG8 Calcium-binding EF-hand family protein1.3e-6794.93Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLR+ ETHFGIDTKPDP+ELSSVY SLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA
        MMLAMANGIG SPVQMLLEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA

A0A6J1EXF9 uncharacterized protein LOC1114370616.7e-5985.19Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVED+E F   +RERFSHLD+D DGVL Y EML+ELQSLR+ ETHFGID KPDPDELSSVYGSLFLQFDRDC+GKVD+GEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKL
        MM+AMANGIGFSPVQM+LEENSFLKKAV+RESTK+
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKL

A0A6J1GM29 uncharacterized protein LOC1114552228.7e-5985.51Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLR+LETHFG+D KPDP+ELSSVY SLF QFDRDCNGKVDLGEFM ET+K
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA
        MMLAMANGIG SPV+M+LEENSFLKKAVDRESTKLAVA
Subjt:  MMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein3.9e-1129.69Show/hide
Query:  ILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLA
        ++ S T++ F+ D ++F     + F  LD+D++G+L   E+ + L ++  +E+          DE  +VY ++F +F  D   K     F +   +++ A
Subjt:  ILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLA

Query:  MANGIGFSPVQMLLEENSFLKKAVDRES
        MA GIG SPV M++  +  + KAV  ES
Subjt:  MANGIGFSPVQMLLEENSFLKKAVDRES

AT2G44310.1 Calcium-binding EF-hand family protein2.4e-3247.14Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        M V ++D +T+ +FV+DEE F   + ERF+ LD+++DGVL   E+ K  +S+RLLE+HFG+D     DEL+++Y S+F +FD D +G VDL EF  E KK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMLL--EENSFLKKAVDRESTKLAVA
        ++LA+A+G+G  P+ M+L  ++++FLKKA D E++KL  A
Subjt:  MMLAMANGIGFSPVQMLL--EENSFLKKAVDRESTKLAVA

AT4G38810.2 Calcium-binding EF-hand family protein2.8e-0928Show/hide
Query:  EILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMML
        ++LD + IV  VE+E+ F  ++ ++F  LD D DG L   E+   +  +          T PD D    +Y  +  +F      KV   EF E    ++L
Subjt:  EILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMML

Query:  AMANGIGFSPVQMLLEENSFLKKAV
         MA G+   P+ +L  +   L + V
Subjt:  AMANGIGFSPVQMLLEENSFLKKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAAATCTTGGACAGTGCAACCATCGTTAATTTTGTGGAAGACGAAGAAGCTTTCAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGACAGAGA
TGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAAAGTCTTAGATTGTTGGAGACTCATTTTGGGATCGATACGAAACCCGATCCCGACGAGCTTTCTTCCGTCT
ATGGCTCCTTGTTCTTGCAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAAGAAACCAAGAAGATGATGCTGGCAATGGCCAATGGGATTGGC
TTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGCTTTCTGAAGAAAGCTGTGGATAGAGAGTCCACCAAACTCGCCGTAGCTTAA
mRNA sequenceShow/hide mRNA sequence
TATTATTCCTCTCCTTCTCTCCCAAAACAAAAACAATTCAAAATGAGCGTAGAAATCTTGGACAGTGCAACCATCGTTAATTTTGTGGAAGACGAAGAAGCTTTCAGTGG
TTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGACAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAAAGTCTTAGATTGTTGGAGACTCATTTTG
GGATCGATACGAAACCCGATCCCGACGAGCTTTCTTCCGTCTATGGCTCCTTGTTCTTGCAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAA
GAAACCAAGAAGATGATGCTGGCAATGGCCAATGGGATTGGCTTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGCTTTCTGAAGAAAGCTGTGGATAGAGAGTCCAC
CAAACTCGCCGTAGCTTAATTAATTATAAGTCTTTTAGAAGAGAGTGCATACCAATTACGGCAAACTAAAATTTTTAGTATTAATTAATTGTGTTCAATTTTGATTTTCT
TTGGAAGGATGCTTCATTTCATCCTAACAAAATGCTTGAGCAACATTAATCTTTTTTTTATTGAGTTCTTATATTCTTATGTGTGATTCTAGAAATCAAATCTAC
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIG
FSPVQMLLEENSFLKKAVDRESTKLAVA