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Clc02G02560 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G02560
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationClcChr02:2320024..2320437
RNA-Seq ExpressionClc02G02560
SyntenyClc02G02560
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144609.1 uncharacterized protein LOC101208968 [Cucumis sativus]5.4e-6391.24Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAFNGW REHF+RLDTD DGFLSYAEMLKELH LRVSEADFGTDVKPDADELS LY  +F QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

XP_008455505.1 PREDICTED: uncharacterized protein LOC103495656 [Cucumis melo]5.9e-6290.51Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAFNGW REHF+RLDTD DGFLSYAEMLKE +TLRVSEADFGTDVK DADELS LYG +F QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

XP_022135904.1 uncharacterized protein LOC111007741 [Momordica charantia]1.2e-4670.9Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD ATI+NFVEDEEAF  WIRE F  LD D DG LSYAEML+ELH+LRV E  FG D KPD DELS LYG +F QFDR+SNG+VD++EFM G K 
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAK
        +M+AIAEGMGFLP+QMALE+DGFLMKAV+ E ++
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAK

XP_023529817.1 uncharacterized protein LOC111792531 [Cucurbita pepo subsp. pepo]5.2e-4265.69Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LDGATIVNFVED+E F   +RE FS LD DGDG LSY EML+EL +LRV E  FG DVKPD DELS +YG++F QFDRD NGKVDV EFM   K 
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MM+A+A G+GF P+QM LE++ FL KAV+RE+ K  A
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

XP_038887184.1 uncharacterized protein LOC120077371 [Benincasa hispida]2.6e-6592.7Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAFNGW REHF+ LDTDGDGFLSYAEMLKELH+LRVSEADFGTDVKPDAD+LS LYG +FGQFDRDSNGKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein3.3e-4266.92Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD ATIVNFVED+ AF  +IR+ F+ LDT+ DG LSY+EML+ELHTLRV E  FG DVKPD DELS +Y ++F QFDRDS+G VD+DEF    K 
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAA
        MMLA+A GMGFLP+QM LE+  FLMKAV+RE A
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAA

A0A1S3C0M6 uncharacterized protein LOC1034956562.9e-6290.51Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAFNGW REHF+RLDTD DGFLSYAEMLKE +TLRVSEADFGTDVK DADELS LYG +F QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

A0A5A7UY59 Uncharacterized protein2.9e-6290.51Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAFNGW REHF+RLDTD DGFLSYAEMLKE +TLRVSEADFGTDVK DADELS LYG +F QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREA KAF+
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

A0A5J5A3Z9 Uncharacterized protein3.3e-4265.69Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD  TIV+FVEDEEAFNG I + F+RLDTD DGFLSYAE+LKEL +LRV E  FG DVK + DEL+ +YG++F QFD DSNG VD++EF    K 
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA
        MMLA+A G+G LP+QMALE+D FL KAV+RE+AK  A
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAKAFA

A0A6J1C2T1 uncharacterized protein LOC1110077415.8e-4770.9Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        MSVE+LD ATI+NFVEDEEAF  WIRE F  LD D DG LSYAEML+ELH+LRV E  FG D KPD DELS LYG +F QFDR+SNG+VD++EFM G K 
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAK
        +M+AIAEGMGFLP+QMALE+DGFLMKAV+ E ++
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREAAK

SwissProt top hitse value%identityAlignment
Q0DJ94 Probable calcium-binding protein CML212.0e-0435.35Show/hide
Query:  LDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKNMMLA
        L G   V   E EE     +RE F   D DGDG++S AE+   L  + + EA     V+            M    DRDS+G+VD +EF    K MM A
Subjt:  LDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKNMMLA

Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein4.7e-0928.91Show/hide
Query:  LLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKNMMLA
        ++   T++ F+ D ++F     ++F  LD D +G LS +E+ + L+ +   E    ++V P  DE   +Y  +F +F  D   K     F   +  ++ A
Subjt:  LLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKNMMLA

Query:  IAEGMGFLPIQMALEKDGFLMKAVQREA
        +A G+G  P+ M +  DG +MKAV  E+
Subjt:  IAEGMGFLPIQMALEKDGFLMKAVQREA

AT2G44310.1 Calcium-binding EF-hand family protein2.3e-2745.59Show/hide
Query:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN
        M V L+DG+T+ +FV+DEE F   + E F+ LD + DG LS +E+ K   ++R+ E+ FG DV    DEL+ LY ++F +FD D +G VD++EF   MK 
Subjt:  MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMAL--EKDGFLMKAVQREAAK
        ++LAIA+G+G  PI M L  + D FL KA   EA+K
Subjt:  MMLAIAEGMGFLPIQMAL--EKDGFLMKAVQREAAK

AT4G27790.1 Calcium-binding EF hand family protein3.5e-0430.11Show/hide
Query:  LDGATIVNFVEDEEAFNG----WI-REHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDE
        LD     NF+  E++ NG    W+ +E  + +DT+GDG L Y E +K  + +    A F    + + DE       +F + DRD +  +  DE
Subjt:  LDGATIVNFVEDEEAFNG----WI-REHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDE

AT4G38810.2 Calcium-binding EF-hand family protein2.8e-0930.25Show/hide
Query:  ELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKNMML
        ++LDG+ IV  VE+E+ F+ ++ + F +LD D DG LS  E+   +  +  +         PD+D    +Y  +  +F   S  KV   EF   + +++L
Subjt:  ELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKNMML

Query:  AIAEGMGFLPIQMALEKDG
         +A G+   PI + L  DG
Subjt:  AIAEGMGFLPIQMALEKDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAATTACTTGACGGCGCCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAATGGTTGGATTAGAGAGCATTTCAGCCGCCTCGACACTGACGGCGA
CGGCTTCCTCTCCTATGCCGAGATGCTGAAGGAGTTGCATACTCTAAGAGTCTCCGAAGCCGACTTTGGAACCGACGTGAAGCCTGATGCGGATGAACTCTCTTGTCTCT
ACGGCACTATGTTTGGGCAGTTCGATCGGGACTCGAATGGAAAAGTTGATGTGGATGAGTTCATGATGGGGATGAAGAACATGATGCTGGCCATTGCTGAGGGAATGGGG
TTCTTGCCTATTCAAATGGCCTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTCCAGAGAGAAGCTGCCAAAGCCTTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAATTACTTGACGGCGCCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAATGGTTGGATTAGAGAGCATTTCAGCCGCCTCGACACTGACGGCGA
CGGCTTCCTCTCCTATGCCGAGATGCTGAAGGAGTTGCATACTCTAAGAGTCTCCGAAGCCGACTTTGGAACCGACGTGAAGCCTGATGCGGATGAACTCTCTTGTCTCT
ACGGCACTATGTTTGGGCAGTTCGATCGGGACTCGAATGGAAAAGTTGATGTGGATGAGTTCATGATGGGGATGAAGAACATGATGCTGGCCATTGCTGAGGGAATGGGG
TTCTTGCCTATTCAAATGGCCTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTCCAGAGAGAAGCTGCCAAAGCCTTTGCTTGA
Protein sequenceShow/hide protein sequence
MSVELLDGATIVNFVEDEEAFNGWIREHFSRLDTDGDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSCLYGTMFGQFDRDSNGKVDVDEFMMGMKNMMLAIAEGMG
FLPIQMALEKDGFLMKAVQREAAKAFA