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Clc02G02590 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G02590
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich protein DC7.1-like
Genome locationClcChr02:2348449..2350751
RNA-Seq ExpressionClc02G02590
SyntenyClc02G02590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645721.1 hypothetical protein Csa_020383 [Cucumis sativus]1.9e-0645.65Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCC
        M+SKAFI LGLLF  V++    EVTA+TA +     EA  +TDE++DVK H  GG  A S+A   C + C  GCC C  G C+       CC
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCC

XP_004144531.1 glycine-rich protein [Cucumis sativus]1.8e-1254.64Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCI---SVVGECGCCVG
        MSSK+FI LGLLF   VVL S E   +TARD K +KEA MET EVD+V+RH +GG  + ++A   CL+ C  GCC C RGRCI   S  GE G   G
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCI---SVVGECGCCVG

XP_038888333.1 glycine-rich protein-like isoform X1 [Benincasa hispida]3.1e-2046.11Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACSRR
        MSSKAFIFLGLLF IVV+ SSEEVT + ARDVKF +EAMMET EVDDV+RHGFGGG A ++A   CL+ C HGCC C RGRCI                 
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACSRR

Query:  TSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN
                                                       RC S AGEAVD +PQAKPNN
Subjt:  TSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN

XP_038888334.1 glycine-rich protein-like isoform X2 [Benincasa hispida]5.2e-2046.11Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACSRR
        MSSKAFIFLGLLF IVV+ SSEEVT + ARDVKF  EAMMET EVDDV+RHGFGGG A ++A   CL+ C HGCC C RGRCI                 
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACSRR

Query:  TSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN
                                                       RC S AGEAVD +PQAKPNN
Subjt:  TSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN

XP_038888674.1 glycine-rich protein-like [Benincasa hispida]6.0e-0837.42Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETD--EVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACS
        MSSKAFIFLG LFV+VV+LSSEEVTAI A D+K +++AMMET+    +DVKR    G              C HGCC                       
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETD--EVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACS

Query:  RRTSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEP
                                                 HHH GGCSRC S AGEAVDAEP
Subjt:  RRTSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEP

TrEMBL top hitse value%identityAlignment
A0A0A0K5A1 Uncharacterized protein8.7e-1354.64Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCI---SVVGECGCCVG
        MSSK+FI LGLLF   VVL S E   +TARD K +KEA MET EVD+V+RH +GG  + ++A   CL+ C  GCC C RGRCI   S  GE G   G
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCI---SVVGECGCCVG

A0A6J1C3E0 glycine-rich protein DC7.1-like5.7e-0463.64Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDE-VDDVKR--HG
        MSSK  IFLGLLF +VV+LSSEEVTA TARD+K ++E M ET+  ++D KR  HG
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDE-VDDVKR--HG

A0A6J1C3T3 glycine-rich protein 3 short isoform-like1.8e-0535.71Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACSRR
        M+SKAFI LGLLF +VV+LSS+    +TARD+K   E +METD V+D K   +  G               HG                    GG   R 
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACSRR

Query:  TSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDT-LDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN
         S+       G           +  +G++        GCC +H G C RC S AGEAVD EPQAKP+N
Subjt:  TSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDT-LDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN

A0A6J1ESD5 glycine-rich protein DC7.1-like1.9e-0451.25Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMET--DEVDDVKRHGFGGGQAISVANNVCLNR----CAHGC
        M+SKAFI LGLLF IV++LSSEE +A TAR +K ++EA+MET  D ++D KR  FGGG      ++   +R    C HGC
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMET--DEVDDVKRHGFGGGQAISVANNVCLNR----CAHGC

A0A6J1JMI7 glycine-rich protein DC7.1-like3.0e-0550Show/hide
Query:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMET--DEVDDVKRHGFGGGQAISVANNVCLNRCAHGC
        M+SKAFI LGLLF +V++LSSEE TA TAR +K ++EA+MET  D ++D KR   GG       +      C HGC
Subjt:  MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMET--DEVDDVKRHGFGGGQAISVANNVCLNRCAHGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCATCGTCGTCGTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCATGAAAGA
AGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATAATGTATGCCTCAACCGTTGCGCCCACGGTT
GTTGCAGCTGCGTCCGCGGCCGTTGCATCAGCGTTGTTGGAGAGTGCGGCTGCTGCGTCGGAGGAGCGTGCAGCCGCAGGACCTCCAAGATTGCAAAGAAAAACTTGATT
GGGGGAGAGGTGGAAGAAAAGATGAGTGAGGAAAAGTGGAGTGAGAAAGGAAAATTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCACCACCACGACGGTGGTTGCAG
CCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCATCGTCGTCGTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCATGAAAGA
AGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATAATGTATGCCTCAACCGTTGCGCCCACGGTT
GTTGCAGCTGCGTCCGCGGCCGTTGCATCAGCGTTGTTGGAGAGTGCGGCTGCTGCGTCGGAGGAGCGTGCAGCCGCAGGACCTCCAAGATTGCAAAGAAAAACTTGATT
GGGGGAGAGGTGGAAGAAAAGATGAGTGAGGAAAAGTGGAGTGAGAAAGGAAAATTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCACCACCACGACGGTGGTTGCAG
CCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA
Protein sequenceShow/hide protein sequence
MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCVGGACSRRTSKIAKKNLI
GGEVEEKMSEEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN