; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G02680 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G02680
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPectin lyase-like superfamily protein
Genome locationClcChr02:2409507..2410477
RNA-Seq ExpressionClc02G02680
SyntenyClc02G02680
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045594.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.1e-6360.78Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NLK NFVTNSIVKDITSLDSKN+HINL GCKN TF HVTITAP NSPNTD IH+SS E+INI+N  I+T DDC+ V D NK+V I+D+TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY+K+K+++ V VK CKL +T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP I+       N   R +         K K+ +  F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQK----YSIICEGVEVADIDLTYNGSE
         T +  K     S  CEGVEVADIDLTY+GSE
Subjt:  QTYLQQK----YSIICEGVEVADIDLTYNGSE

XP_016903689.1 PREDICTED: exopolygalacturonase-like, partial [Cucumis melo]1.1e-6360.78Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NLK NFVTNSIVKDITSLDSKN+HINL GCKN TF HVTITAP NSPNTD IH+SS E+INI+N  I+T DDC+ V D NK+V I+D+TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY+K+K+++ V VK CKL +T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP I+       N   R +         K K+ +  F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQK----YSIICEGVEVADIDLTYNGSE
         T +  K     S  CEGVEVADIDLTY+GSE
Subjt:  QTYLQQK----YSIICEGVEVADIDLTYNGSE

XP_022136075.1 exopolygalacturonase-like [Momordica charantia]3.7e-6460.34Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        +LKFNFVTNS+VKDITSLDSKNFHINL GCKN TFQHVTI+AP++SPNTD IH+SS E INI+N  I T DDC+ V D+N ++TI+D+TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY+K+KD+I V VK CKL +T+NGVRIKTW  SAGAF  SDMHFEDIEMV+VSNP I+       N   R +         K K+    F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQKY----SIICEGVEVADIDLTYNGSE
         T +  K     S  CEGVEVADI+LTYNG +
Subjt:  QTYLQQKY----SIICEGVEVADIDLTYNGSE

XP_031744814.1 exopolygalacturonase-like [Cucumis sativus]7.9e-6763.04Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NLKF+F+TNSIVKDITSLDSKNFHINL GCKN TFQHVTI+APENSPNTD IH+SS E+INI++ KIST DDCV V D+NK+VTIT++TCG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY K+KD++ V VK CKLINT+NGVRIKTW  SAGAF  SDMHFEDIEM +VSNP I+       N   R +         K K+    F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQKY----SIICEGVEVADIDLTYNG
         T +  K     SI CEGVEVADI+LTY+G
Subjt:  QTYLQQKY----SIICEGVEVADIDLTYNG

XP_031744817.1 exopolygalacturonase-like [Cucumis sativus]1.4e-6663.04Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NLKF+F+TNSIVKDITSLDSKNFHINL GCKN TFQHVTI+APENSPNTD IH+SS E+INI++ KIST DDCV V D+NK+VTIT++TCG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY K+KD++ V VK CKLINT+NGVRIKTW  SAGAF  SDMHFEDIEM +VSNP I+       N   R +         K K+    F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQKY----SIICEGVEVADIDLTYNG
         T +  K     SI CEGVEVADI+LTY+G
Subjt:  QTYLQQKY----SIICEGVEVADIDLTYNG

TrEMBL top hitse value%identityAlignment
A0A5A7TR51 Exopolygalacturonase-like5.2e-6460.78Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NLK NFVTNSIVKDITSLDSKN+HINL GCKN TF HVTITAP NSPNTD IH+SS E+INI+N  I+T DDC+ V D NK+V I+D+TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY+K+K+++ V VK CKL +T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP I+       N   R +         K K+ +  F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQK----YSIICEGVEVADIDLTYNGSE
         T +  K     S  CEGVEVADIDLTY+GSE
Subjt:  QTYLQQK----YSIICEGVEVADIDLTYNGSE

A0A5A7TRZ0 Exopolygalacturonase-like5.2e-6460.78Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NLK NFVTNSIVKDITSLDSKN+HINL GCKN TF HVTITAP NSPNTD IH+SS E+INI+N  I+T DDC+ V D NK+V I+D+TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY+K+K+++ V VK CKL +T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP I+       N   R +         K K+ +  F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQK----YSIICEGVEVADIDLTYNGSE
         T +  K     S  CEGVEVADIDLTY+GSE
Subjt:  QTYLQQK----YSIICEGVEVADIDLTYNGSE

A0A5D3BWP4 Exopolygalacturonase-like5.2e-6460.78Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NLK NFVTNSIVKDITSLDSKN+HINL GCKN TF HVTITAP NSPNTD IH+SS E+INI+N  I+T DDC+ V D NK+V I+D+TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY+K+K+++ V VK CKL +T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP I+       N   R +         K K+ +  F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQK----YSIICEGVEVADIDLTYNGSE
         T +  K     S  CEGVEVADIDLTY+GSE
Subjt:  QTYLQQK----YSIICEGVEVADIDLTYNGSE

A0A5D3DYI3 Exopolygalacturonase-like5.2e-6460.78Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NLK NFVTNSIVKDITSLDSKN+HINL GCKN TF HVTITAP NSPNTD IH+SS E+INI+N  I+T DDC+ V D NK+V I+D+TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY+K+K+++ V VK CKL +T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP I+       N   R +         K K+ +  F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQK----YSIICEGVEVADIDLTYNGSE
         T +  K     S  CEGVEVADIDLTY+GSE
Subjt:  QTYLQQK----YSIICEGVEVADIDLTYNGSE

A0A6J1C2U8 exopolygalacturonase-like1.8e-6460.34Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        +LKFNFVTNS+VKDITSLDSKNFHINL GCKN TFQHVTI+AP++SPNTD IH+SS E INI+N  I T DDC+ V D+N ++TI+D+TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGKY+K+KD+I V VK CKL +T+NGVRIKTW  SAGAF  SDMHFEDIEMV+VSNP I+       N   R +         K K+    F K +R  +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQKY----SIICEGVEVADIDLTYNGSE
         T +  K     S  CEGVEVADI+LTYNG +
Subjt:  QTYLQQKY----SIICEGVEVADIDLTYNGSE

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)1.1e-4242.34Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NL+   VTNSI++D+T+LDSKNFH+N+ GCKN TF+   I+A E S NTD IH+   + +NI+N +I T DDC+ + D +K + IT+ITCG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQSQRFHKKLRSATQTYL
        LG+Y  ++ ++ + VK C +  + NGVRIKTW  S      S+MHF+DI M SV  P ++             V       K+  +       +     L
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQSQRFHKKLRSATQTYL

Query:  QQKYSIICEGVEVADIDLTYNG
            S  C GVE+ADIDLTY+G
Subjt:  QQKYSIICEGVEVADIDLTYNG

Q05967 Polygalacturonase8.9e-4543.42Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        NL FN +TNS +KDIT+LDSK+FH+N+  CKN TF    ++AP NSPNTD IH+S    +NI +   ST DDC+ V D  +++ IT +TCG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGI----NATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LG    +K ++ V V+ C   NT NGVRIKTW  S      +D+HFEDI + +VSNP ++  +    N   + +   V +     KV  Q      R+  
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGI----NATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQKYSIICEGVEVADIDLTYNGSE
           L +   + CEG+EV DID+TY+G E
Subjt:  QTYLQQKYSIICEGVEVADIDLTYNGSE

Q39766 Polygalacturonase6.4e-4342.61Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        N++F+FVTN++++DITS DSK FHIN+F CKN T + + I AP+ SPNTD IHM   E +NI+   I T DDC+ + D  K + I +ITCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQ-SQRFHKKLRSATQTY
        LGK+  ++ +  + +  C + NTSNG RIKTW    G    S++HFEDI M +VS+P ++      ++Y        + + KV+ S    K +R  +   
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQ-SQRFHKKLRSATQTY

Query:  LQQKY----SIICEGVEVADIDLTYNGSEP
           K+    S  C+ VE+ADID+ +NG+EP
Subjt:  LQQKY----SIICEGVEVADIDLTYNGSEP

Q39786 Polygalacturonase1.4e-4242.17Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        N++F+F+TN++++DITS DSK FHIN+F CKN T + + I AP+ SPNTD IHM   E +NI+   I T DDC+ + D  K + I +ITCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQ-SQRFHKKLRSATQTY
        LGK+  ++ +  + +  C + NTSNG RIKTW    G    S++HFEDI M +VS+P ++      ++Y        + + KV+ S    K +R  +   
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQ-SQRFHKKLRSATQTY

Query:  LQQKY----SIICEGVEVADIDLTYNGSEP
           K+    S  C+ VE+ADID+ +NG+EP
Subjt:  LQQKY----SIICEGVEVADIDLTYNGSEP

Q40312 Polygalacturonase6.1e-4643.17Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        N  FNFV NSIV+ +TS DSKNFH+ +FGCKN TF   TITAP +SPNTD IHM    ++ I+N  I T DDCV + D +K++T+  + CG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV----HGINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT
        LGK+  ++++  + VK C L  T NGVRIKTW  + G  T SD+HFEDI M +V NP I+    +  N   +     + L     K+  +       +A 
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV----HGINATKRYILELVLLPHFKRKVQSQRFHKKLRSAT

Query:  QTYLQQKYSIICEGVEVADIDLTYNGS
           L    ++ C+GVE+ ++DL +NG+
Subjt:  QTYLQQKYSIICEGVEVADIDLTYNGS

Arabidopsis top hitse value%identityAlignment
AT2G26620.1 Pectin lyase-like superfamily protein1.1e-3439.3Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        ++ F FV NS +KDITSL+SK  H N F   +F    VTITAP +SPNTD I M S   I I N  I T DDC+ +     K+ I++I CG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQSQRFHKK-----LRSA
        LGK   +KD+  + V+      TS+G+RIKTW  SA     S+  +E+I+M+ V  P     IN  ++Y          K  VQ Q    K      ++ 
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQSQRFHKK-----LRSA

Query:  TQTYLQQKYSIICEGVEVADIDLTYNGSE
            LQ   S  C+ VE+ DI++  NG E
Subjt:  TQTYLQQKYSIICEGVEVADIDLTYNGSE

AT3G07820.1 Pectin lyase-like superfamily protein1.7e-4339.83Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        +++F+F+ NS ++DI+S+D+KNFHIN+ G KN T  ++ I APE+SPNTD IH+   + + I+N  IST DDC+ V D  K + +  +TCG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILELVLLPHFKRKVQSQRFHKKLR
        LG+Y  ++D+  + V  C L  T NG+RIKTW  +A + T SD+HFEDI +  VSNP ++       +  N  K   ++LV +       ++ R     +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILELVLLPHFKRKVQSQRFHKKLR

Query:  SATQTYLQQKYSIICEGVEVADIDLTYNGSE
         A +    + Y   C+ VE+ DID+ YNG++
Subjt:  SATQTYLQQKYSIICEGVEVADIDLTYNGSE

AT3G07830.1 Pectin lyase-like superfamily protein1.4e-4038.96Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        +++F+FVTN+ ++DI+S+D+KNFHIN+ G KN TF +V I AP  SPNTD IH+     ++I+N +IST DDCV V D    + + ++ CG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILELVLLPHFKRKVQSQRFHKKLR
        LG+Y  ++D+  + V  C L  T NG+RIKTW  +A + T S++HFE+I + +VSNP ++       +  N  K   ++L  +    R+++    +K   
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILELVLLPHFKRKVQSQRFHKKLR

Query:  SATQTYLQQKYSIICEGVEVADIDLTYNGSE
         A +    + Y   CE V+V DI++ Y G++
Subjt:  SATQTYLQQKYSIICEGVEVADIDLTYNGSE

AT3G07840.1 Pectin lyase-like superfamily protein3.0e-4038.1Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        +++F+FV N+ ++DI+S+D+KNFHIN+ G KN TF +V + AP  SPNTD IH+   E + I+N KI+T DDC+ V D  K + + ++ CG GH +S+GS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILELVLLPHFKRKVQSQRFHKKLR
        LG+Y  ++D+  + V  C L  T NG+RIKTW  +A A T S +HFE+I + +VSNP ++       +  N  K   ++LV +       ++ R     +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILELVLLPHFKRKVQSQRFHKKLR

Query:  SATQTYLQQKYSIICEGVEVADIDLTYNGSE
         A +    + +   C  VE+ +I+L Y G++
Subjt:  SATQTYLQQKYSIICEGVEVADIDLTYNGSE

AT5G48140.1 Pectin lyase-like superfamily protein4.0e-4039.39Show/hide
Query:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS
        +++F+FVT++ ++ ITSLD+K+FHIN+ G KN TF+ V I AP  SPNTD IH+   + I I+N  IST DDCV V D  K + +  +TCG GH +SIGS
Subjt:  NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGS

Query:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILELVLLPHFKRKVQSQRFHKKLR
        LG+Y+ ++++  + +  C L  T NG+RIKTW  +A   T SD+HFE+I + +VSNP ++       +  N  K   ++L  +   K +  S       +
Subjt:  LGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILELVLLPHFKRKVQSQRFHKKLR

Query:  SATQTYLQQKYSIICEGVEVADIDLTYNGSE
         A +    + Y   C+ VEV D+++ Y G++
Subjt:  SATQTYLQQKYSIICEGVEVADIDLTYNGSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAGGGAAAGCAGAATTTGAAATTCAATTTCGTCACCAATTCAATAGTGAAGGACATAACTTCCTTGGATAGTAAAAACTTCCATATCAATCTCTTTGGGTGCAA
GAATTTTACTTTTCAACACGTCACAATTACTGCACCAGAAAATAGTCCCAATACCGATAGAATTCATATGAGTAGTTTAGAAGAGATTAACATTATGAACAGAAAAATCT
CAACGAGAGATGATTGTGTGTATGTTAGAGACAACAACAAGAAAGTAACTATTACTGATATAACTTGCGGACTAGGACATGTTAGCATAGGAAGTTTAGGCAAGTACGCC
AAGCAAAAAGACATGATAGTAGTTGTGGTGAAAACATGCAAATTAATCAATACTTCAAACGGTGTTAGGATCAAAACATGGTCAGTATCTGCTGGCGCATTCACAACCTC
TGACATGCATTTTGAAGATATTGAAATGGTTAGCGTTAGTAATCCTAACATTGTCCATGGAATCAATGCAACTAAAAGGTATATATTGGAATTAGTACTCCTACCTCATT
TTAAAAGAAAAGTGCAAAGCCAAAGGTTTCATAAAAAACTAAGATCAGCAACTCAAACTTATTTGCAGCAAAAGTATAGCATAATATGTGAAGGTGTAGAAGTTGCTGAT
ATTGACCTAACTTATAATGGAAGTGAACCCCACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAGGGAAAGCAGAATTTGAAATTCAATTTCGTCACCAATTCAATAGTGAAGGACATAACTTCCTTGGATAGTAAAAACTTCCATATCAATCTCTTTGGGTGCAA
GAATTTTACTTTTCAACACGTCACAATTACTGCACCAGAAAATAGTCCCAATACCGATAGAATTCATATGAGTAGTTTAGAAGAGATTAACATTATGAACAGAAAAATCT
CAACGAGAGATGATTGTGTGTATGTTAGAGACAACAACAAGAAAGTAACTATTACTGATATAACTTGCGGACTAGGACATGTTAGCATAGGAAGTTTAGGCAAGTACGCC
AAGCAAAAAGACATGATAGTAGTTGTGGTGAAAACATGCAAATTAATCAATACTTCAAACGGTGTTAGGATCAAAACATGGTCAGTATCTGCTGGCGCATTCACAACCTC
TGACATGCATTTTGAAGATATTGAAATGGTTAGCGTTAGTAATCCTAACATTGTCCATGGAATCAATGCAACTAAAAGGTATATATTGGAATTAGTACTCCTACCTCATT
TTAAAAGAAAAGTGCAAAGCCAAAGGTTTCATAAAAAACTAAGATCAGCAACTCAAACTTATTTGCAGCAAAAGTATAGCATAATATGTGAAGGTGTAGAAGTTGCTGAT
ATTGACCTAACTTATAATGGAAGTGAACCCCACCATTAG
Protein sequenceShow/hide protein sequence
MVKGKQNLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGHVSIGSLGKYA
KQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVAD
IDLTYNGSEPHH