CuGenDBv2

Gene ID	Clc02G03155
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	PHYTOCHROME_2 domain-containing protein
Genome location	ClcChr02:2763403..2763828
RNA-Seq Expression	Clc02G03155
Synteny	Clc02G03155
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0059264.1 uncharacterized protein E6C27_scaffold430G001990 [Cucumis melo var. makuwa]

6.1e-54

95.8

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Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIF RDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

XP_004144623.1 uncharacterized protein LOC101212645 isoform X1 [Cucumis sativus]

2.7e-54

96.64

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Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIFKRDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

XP_008462023.1 PREDICTED: uncharacterized protein LOC103500493 isoform X3 [Cucumis melo]

6.1e-54

95.8

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Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIF RDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

XP_016902820.1 PREDICTED: uncharacterized protein LOC103500493 isoform X2 [Cucumis melo]

6.1e-54

95.8

Show/hide

Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIF RDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

XP_031744677.1 uncharacterized protein LOC101212645 isoform X2 [Cucumis sativus]

2.7e-54

96.64

Show/hide

Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIFKRDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6D4 Uncharacterized protein

1.3e-54

96.64

Show/hide

Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIFKRDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

A0A1S3CFV9 uncharacterized protein LOC103500493 isoform X3

3.0e-54

95.8

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Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIF RDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

A0A1S4E4B4 uncharacterized protein LOC103500493 isoform X2

3.0e-54

95.8

Show/hide

Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIF RDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

A0A5A7UW10 Uncharacterized protein

3.0e-54

95.8

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Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIF RDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

A0A5D3BZ82 Uncharacterized protein

3.0e-54

95.8

Show/hide

Query:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
        MASKDPEE ANTATEEESLAFKKKRARRVSFAD EITSVHIF RDEDYETPPEPQ TPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR
Subjt:  MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLR

Query:  PLGSPSPGSISAGSAASND
        PLGSPSPGSISAGSA SND
Subjt:  PLGSPSPGSISAGSAASND

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G04235.1 unknown protein

1.6e-20

46.53

Show/hide

Query:  MASKDPEEAANT----ATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPP-----EPQATPEAALP--DNEVLGFFRDLADSDDSRESSPNLDD
        MAS+ PE+  N      T+EES+A ++KR RRVSFAD EITSVHIF RDEDYETPP     +PQ   + + P  DN+V+ FF +L+D +D+        +
Subjt:  MASKDPEEAANT----ATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPP-----EPQATPEAALP--DNEVLGFFRDLADSDDSRESSPNLDD

Query:  DVLGQRKSFLRPLGSPSPGSISAGSAASNDG--MFFCFFLSSFY
         +L   KSFLRP  SPS G  + GSA S++G     C F   F+
Subjt:  DVLGQRKSFLRPLGSPSPGSISAGSAASNDG--MFFCFFLSSFY

Sequences

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CDS sequence

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ATGGCTTCCAAGGACCCCGAAGAGGCCGCCAACACGGCCACTGAGGAAGAAAGTTTGGCATTCAAGAAGAAGCGGGCTCGACGCGTGAGCTTTGCTGATGTCGAGATCAC
TTCTGTGCATATCTTTAAGCGCGATGAGGACTACGAGACGCCTCCTGAGCCCCAAGCCACTCCGGAGGCTGCTCTTCCGGACAACGAGGTCCTAGGGTTCTTCAGGGACT
TGGCTGATAGCGATGATTCCCGTGAATCTTCGCCTAATTTAGATGACGATGTTCTTGGGCAGAGGAAATCGTTTTTGAGGCCGCTTGGATCGCCGTCGCCGGGGAGTATT
TCTGCCGGTTCTGCAGCCTCCAATGATGGCATGTTTTTCTGTTTCTTTCTCTCTTCGTTTTATGTAGCATTTTGTTTGTTGGGTTTTTCGATTTGA

mRNA sequence

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Protein sequence

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MASKDPEEAANTATEEESLAFKKKRARRVSFADVEITSVHIFKRDEDYETPPEPQATPEAALPDNEVLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLRPLGSPSPGSI
SAGSAASNDGMFFCFFLSSFYVAFCLLGFSI

Clc02G03155 (gene) of Watermelon (cordophanus) v2 genome