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Clc02G04290 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04290
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:3702448..3703052
RNA-Seq ExpressionClc02G04290
SyntenyClc02G04290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4290916.1 unnamed protein product [Prunus armeniaca]3.2e-1450Show/hide
Query:  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAA--PASVSVEQRLALMRRKQL
        R LFR  R R N K      N+L+EAIAK +   +EGT  +S Q++E+GVVR+K++V++ DL QVLE M   G   + +A  P+S+ VEQRL+L+R+K L
Subjt:  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAA--PASVSVEQRLALMRRKQL

Query:  LRAKLAA-----ATWSPALQSIPE
        LRA LAA      +W PALQSIPE
Subjt:  LRAKLAA-----ATWSPALQSIPE

KAA0025124.1 hypothetical protein E6C27_scaffold124G00220 [Cucumis melo var. makuwa]1.3e-4784.5Show/hide
Query:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAM---GSDGGRGEGAAPASVSVEQRLALM
        M++GKQ VSPNG FRRLFRARCRK+AK N LLEAIAKASREGTGFVS SEENGVVRIKMVVKKTDLAQVLEAM   G DGG G G A ASVS+EQRLA++
Subjt:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAM---GSDGGRGEGAAPASVSVEQRLALM

Query:  RRKQLLRAKLAAATWSPALQSIP-EIDSF
        RRKQLLRAKLAAATWSPALQSIP EIDSF
Subjt:  RRKQLLRAKLAAATWSPALQSIP-EIDSF

KAG6572129.1 hypothetical protein SDJN03_28857, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4583.74Show/hide
Query:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRK
        M+DGKQT SPNGAFRRLFRAR RKNAK ++LLEAIAK SREGTGFVSQ+EE+GVVRIKMVVKKTDLAQVLEA+   GG G G APASVSVE RLA+MRRK
Subjt:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRK

Query:  QLLRAKLAAATWSPALQSIPEID
        Q LRAKLAAATWSPALQSIPEI+
Subjt:  QLLRAKLAAATWSPALQSIPEID

KGN43274.1 hypothetical protein Csa_020212 [Cucumis sativus]2.3e-4480.16Show/hide
Query:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRK
        M++GKQ  SPNG FRRLFRARCRK+AK N LLEAIAKASREG GFVS SEENGVVRIKMVVKKTDL QVLEAMG   G G   APASVS+E RL ++RRK
Subjt:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRK

Query:  QLLRAKLAAATWSPALQSIP-EIDSF
        Q LRAKLAAATWSPALQSIP EIDSF
Subjt:  QLLRAKLAAATWSPALQSIP-EIDSF

XP_023511743.1 uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo]1.1e-4685.71Show/hide
Query:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRK
        M+DGKQT SPNGAFRRLFRAR RKNAK ++LLEAIAK SREGTGFVSQ+EE+GVVRIKMVVKKTDLAQVLEAM   GG G G APASVSVEQRLA+MRRK
Subjt:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRK

Query:  QLLRAKLAAATWSPALQSIP-EIDSF
        Q LRAKLAAATWSPALQSIP EIDSF
Subjt:  QLLRAKLAAATWSPALQSIP-EIDSF

TrEMBL top hitse value%identityAlignment
A0A0A0K2L8 Uncharacterized protein1.1e-4480.16Show/hide
Query:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRK
        M++GKQ  SPNG FRRLFRARCRK+AK N LLEAIAKASREG GFVS SEENGVVRIKMVVKKTDL QVLEAMG   G G   APASVS+E RL ++RRK
Subjt:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRK

Query:  QLLRAKLAAATWSPALQSIP-EIDSF
        Q LRAKLAAATWSPALQSIP EIDSF
Subjt:  QLLRAKLAAATWSPALQSIP-EIDSF

A0A314YA00 Uncharacterized protein7.7e-1449.59Show/hide
Query:  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKTDLAQVLEAM-GSDGGRGEGAAPASVSVEQRLALMRRKQLL
        R LFR  R R N K      N+L+EAIAK +   +EGT  +S Q++E+GVVR+K++V++ DL QVLE M G    +     P+S+ VEQRL+L+R+K LL
Subjt:  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKTDLAQVLEAM-GSDGGRGEGAAPASVSVEQRLALMRRKQLL

Query:  RAKLAA-----ATWSPALQSIPE
        RA LAA     ++W PALQSIPE
Subjt:  RAKLAA-----ATWSPALQSIPE

A0A314Z8S5 Uncharacterized protein1.7e-1349.59Show/hide
Query:  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKTDLAQVLE-AMGSDGGRGEGAAPASVSVEQRLALMRRKQLL
        R LFR  R R N K      N+L+EAIAK +   +EGT  +S QS+E+GVVR+K++V++ DL QVLE   G    +     P+S+ VEQRL+L+R+K LL
Subjt:  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKTDLAQVLE-AMGSDGGRGEGAAPASVSVEQRLALMRRKQLL

Query:  RAKLAA-----ATWSPALQSIPE
        RA LAA     ++W PALQSIPE
Subjt:  RAKLAA-----ATWSPALQSIPE

A0A5A7SHL7 Uncharacterized protein6.3e-4884.5Show/hide
Query:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAM---GSDGGRGEGAAPASVSVEQRLALM
        M++GKQ VSPNG FRRLFRARCRK+AK N LLEAIAKASREGTGFVS SEENGVVRIKMVVKKTDLAQVLEAM   G DGG G G A ASVS+EQRLA++
Subjt:  MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAM---GSDGGRGEGAAPASVSVEQRLALM

Query:  RRKQLLRAKLAAATWSPALQSIP-EIDSF
        RRKQLLRAKLAAATWSPALQSIP EIDSF
Subjt:  RRKQLLRAKLAAATWSPALQSIP-EIDSF

A0A6J5VPM4 Uncharacterized protein1.6e-1450Show/hide
Query:  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAA--PASVSVEQRLALMRRKQL
        R LFR  R R N K      N+L+EAIAK +   +EGT  +S Q++E+GVVR+K++V++ DL QVLE M   G   + +A  P+S+ VEQRL+L+R+K L
Subjt:  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAA--PASVSVEQRLALMRRKQL

Query:  LRAKLAA-----ATWSPALQSIPE
        LRA LAA      +W PALQSIPE
Subjt:  LRAKLAA-----ATWSPALQSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGACGGAAAGCAGACTGTGTCGCCGAACGGAGCTTTCCGGCGACTTTTCAGAGCTCGATGCCGGAAAAATGCCAAACCCAATAGTCTATTGGAAGCCATTGCCAA
AGCAAGCAGAGAAGGAACTGGTTTTGTTTCTCAGAGCGAAGAAAACGGCGTCGTACGGATAAAGATGGTGGTGAAGAAGACAGATTTAGCCCAAGTTCTCGAAGCCATGG
GCAGCGACGGCGGCCGCGGCGAAGGAGCTGCTCCGGCGTCTGTCTCCGTCGAACAGCGGTTGGCTCTTATGAGGCGGAAGCAACTTCTCCGTGCGAAATTAGCGGCCGCC
ACTTGGAGTCCGGCGCTGCAGAGCATTCCTGAGATCGATTCATTCTGA
mRNA sequenceShow/hide mRNA sequence
TCTCGTTCTCTTCAATATATATATTTATTTATTTGTTCATTCTGGTTTTCTAGAATGAGGAATTTTCAGTTTTGAACCAAAATCCAGTTTTCCAGCCGCGTTCGCGCAAT
TTAAATATTCGCTAAATCTTCATAACCACTTAGTCCACCCTCTCTCTATTTATACATTGCTGATTCCGATTCCGATTCCCTCCAATTTCAACCGAAAACCCTAACAATAT
GGTCGACGGAAAGCAGACTGTGTCGCCGAACGGAGCTTTCCGGCGACTTTTCAGAGCTCGATGCCGGAAAAATGCCAAACCCAATAGTCTATTGGAAGCCATTGCCAAAG
CAAGCAGAGAAGGAACTGGTTTTGTTTCTCAGAGCGAAGAAAACGGCGTCGTACGGATAAAGATGGTGGTGAAGAAGACAGATTTAGCCCAAGTTCTCGAAGCCATGGGC
AGCGACGGCGGCCGCGGCGAAGGAGCTGCTCCGGCGTCTGTCTCCGTCGAACAGCGGTTGGCTCTTATGAGGCGGAAGCAACTTCTCCGTGCGAAATTAGCGGCCGCCAC
TTGGAGTCCGGCGCTGCAGAGCATTCCTGAGATCGATTCATTCTGAATAAGCGAA
Protein sequenceShow/hide protein sequence
MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRKQLLRAKLAAA
TWSPALQSIPEIDSF